DY259992

Overview
NameDY259992
Unique NameDY259992
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1107
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15_SILAS (60S ribosomal protein L15 OS=Silurus asotus GN=rpl15 PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 3.277e-56
Identity = 92/149 (61.74%), Postives = 104/149 (69.80%), Query Frame = 1
Query:   34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQ 480
            MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  R TRPDKARRLGYKAKQ                       YGKP + GV QLKF RS +S+AEERAGR  GGL+VLNSYW+ EDSTYK+FEVIL+D  H AIR +P  Q
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRATRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSIAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDMQ 149          

HSP 2 Score: 53.1434 bits (126), Expect = 3.277e-56
Identity = 28/53 (52.83%), Postives = 31/53 (58.49%), Query Frame = 2
Query:  470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKGSPCTTRHDLQEGQPWKRNQT 628
            P + WI K VHKHRE+RGLTSAGKK RGL GKG              W+R  T
Sbjct:  146 PDMQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197          
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15_MONAL (60S ribosomal protein L15 OS=Monopterus albus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 187.193 bits (474), Expect = 3.277e-56
Identity = 91/149 (61.07%), Postives = 104/149 (69.80%), Query Frame = 1
Query:   34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQ 480
            MGAY+Y+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  G L+VLNSYW+ EDSTYK+FEVIL+D  H AIR +P  Q
Sbjct:    1 MGAYRYMQELWRKKQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQ 149          

HSP 2 Score: 53.5286 bits (127), Expect = 3.277e-56
Identity = 29/53 (54.72%), Postives = 30/53 (56.60%), Query Frame = 2
Query:  470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKGSPCTTRHDLQEGQPWKRNQT 628
            P   WI K VHKHRE+RGLTSAGKK RGL GKG              WKR  T
Sbjct:  146 PDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197          
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15_SILME (60S ribosomal protein L15 OS=Silurus meridionalis GN=rpl15 PE=2 SV=3)

HSP 1 Score: 187.193 bits (474), Expect = 4.272e-56
Identity = 92/149 (61.74%), Postives = 104/149 (69.80%), Query Frame = 1
Query:   34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQ 480
            MGA KY+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV QLKF RS +S+AEERAGR  GGL+VLNSYW+ EDSTYK+FEVIL+D  H AIR +P  Q
Sbjct:    1 MGASKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSIAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDMQ 149          

HSP 2 Score: 53.1434 bits (126), Expect = 4.272e-56
Identity = 28/53 (52.83%), Postives = 31/53 (58.49%), Query Frame = 2
Query:  470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKGSPCTTRHDLQEGQPWKRNQT 628
            P + WI K VHKHRE+RGLTSAGKK RGL GKG              W+R  T
Sbjct:  146 PDMQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197          
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15_PARDA (60S ribosomal protein L15 OS=Paramisgurnus dabryanus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 5.570e-56
Identity = 92/149 (61.74%), Postives = 104/149 (69.80%), Query Frame = 1
Query:   34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQ 480
            MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ  S+ R  +PTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +S AEERAGR  GGL+VL+SYW+ EDSTYK+FEVILVD  H AIR +P  Q
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSSLHRTPKPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQ 149          

HSP 2 Score: 52.373 bits (124), Expect = 5.570e-56
Identity = 28/53 (52.83%), Postives = 30/53 (56.60%), Query Frame = 2
Query:  470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKGSPCTTRHDLQEGQPWKRNQT 628
            P   WI K VHKHRE+RGLTSAGKK RGL GKG              W+R  T
Sbjct:  146 PDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197          
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15_ANGJA (60S ribosomal protein L15 OS=Anguilla japonica GN=rpl15 PE=2 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 5.570e-56
Identity = 91/149 (61.07%), Postives = 102/149 (68.46%), Query Frame = 1
Query:   34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQ 480
            MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ   + R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +S AEERAGR  G L+VLNSYW+ EDSTYK+FEVIL+D  H A+R DP  Q
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSGLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAVRRDPDAQ 149          

HSP 2 Score: 52.373 bits (124), Expect = 5.570e-56
Identity = 28/53 (52.83%), Postives = 30/53 (56.60%), Query Frame = 2
Query:  470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKGSPCTTRHDLQEGQPWKRNQT 628
            P   WI K VHKHRE+RGLTSAGKK RGL GKG              W+R  T
Sbjct:  146 PDAQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197          
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15_EPICO (60S ribosomal protein L15 OS=Epinephelus coioides GN=rpl15 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 5.570e-56
Identity = 91/149 (61.07%), Postives = 103/149 (69.13%), Query Frame = 1
Query:   34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQ 480
            MGAY+Y+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +S AEERAGR  G L+VLNSYW+ EDSTYK+FEVILVD  H AIR +P  Q
Sbjct:    1 MGAYRYMQELWRKKQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILVDTFHKAIRRNPDTQ 149          

HSP 2 Score: 53.5286 bits (127), Expect = 5.570e-56
Identity = 29/53 (54.72%), Postives = 30/53 (56.60%), Query Frame = 2
Query:  470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKGSPCTTRHDLQEGQPWKRNQT 628
            P   WI K VHKHRE+RGLTSAGKK RGL GKG              WKR  T
Sbjct:  146 PDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197          
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15A_YEAST (60S ribosomal protein L15-A OS=Saccharomyces cerevisiae GN=RPL15A PE=1 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 9.467e-56
Identity = 93/145 (64.14%), Postives = 102/145 (70.34%), Query Frame = 1
Query:   34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRND 468
            MGAYKY+ EL RKKQSDV+RFLQRVR WEYRQ   I R  RPTRPDKARRLGYKAKQ                       YGKPTNQGV +LK+QRS R+ AEER GR+   L+VLNSYW+N+DSTYKYFEVILVD  H AIR D
Sbjct:    1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRAARPTRPDKARRLGYKAKQGFVIYRVRVRRGNRKRPVPKGATYGKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYWVNQDSTYKYFEVILVDPQHKAIRRD 145          

HSP 2 Score: 52.7582 bits (125), Expect = 9.467e-56
Identity = 26/52 (50.00%), Postives = 31/52 (59.62%), Query Frame = 2
Query:  473 RINWICKPVHKHRELRGLTSAGKKYRGLRGKGSPCTTRHDLQEGQPWKRNQT 628
            R NWIC PVHKHRE RGLT+ GKK RG+        T+   +  + WKR  T
Sbjct:  147 RYNWICDPVHKHREARGLTATGKKSRGINKGHKFNNTKAGRR--KTWKRQNT 196          
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15B_YEAST (60S ribosomal protein L15-B OS=Saccharomyces cerevisiae GN=RPL15B PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 9.467e-56
Identity = 93/145 (64.14%), Postives = 102/145 (70.34%), Query Frame = 1
Query:   34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRND 468
            MGAYKY+ EL RKKQSDV+RFLQRVR WEYRQ   I R  RPTRPDKARRLGYKAKQ                       YGKPTNQGV +LK+QRS R+ AEER GR+   L+VLNSYW+N+DSTYKYFEVILVD  H AIR D
Sbjct:    1 MGAYKYLEELERKKQSDVLRFLQRVRVWEYRQKNVIHRAARPTRPDKARRLGYKAKQGFVIYRVRVRRGNRKRPVPKGATYGKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYWVNQDSTYKYFEVILVDPQHKAIRRD 145          

HSP 2 Score: 53.1434 bits (126), Expect = 9.467e-56
Identity = 26/52 (50.00%), Postives = 31/52 (59.62%), Query Frame = 2
Query:  473 RINWICKPVHKHRELRGLTSAGKKYRGLRGKGSPCTTRHDLQEGQPWKRNQT 628
            R NWIC PVHKHRE RGLT+ GKK RG+        T+   +  + WKR  T
Sbjct:  147 RYNWICNPVHKHREARGLTATGKKSRGINKGHKFNNTKAGRR--KTWKRQNT 196          
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15_PELFU (60S ribosomal protein L15 OS=Pelteobagrus fulvidraco GN=rpl15 PE=2 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.234e-55
Identity = 91/149 (61.07%), Postives = 105/149 (70.47%), Query Frame = 1
Query:   34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQ 480
            MGAY+Y+ +LWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  GGL+VL+SYW+ EDSTYK+FEVILVD  H AIR +P  Q
Sbjct:    1 MGAYRYMQKLWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQ 149          

HSP 2 Score: 52.373 bits (124), Expect = 1.234e-55
Identity = 28/53 (52.83%), Postives = 30/53 (56.60%), Query Frame = 2
Query:  470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKGSPCTTRHDLQEGQPWKRNQT 628
            P   WI K VHKHRE+RGLTSAGKK RGL GKG              W+R  T
Sbjct:  146 PDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197          
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15_SINKN (60S ribosomal protein L15 OS=Siniperca kneri GN=rpl15 PE=2 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 1.234e-55
Identity = 89/149 (59.73%), Postives = 103/149 (69.13%), Query Frame = 1
Query:   34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQ 480
            MGAY+Y+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +S AEERAGR  G L+VLNSYW+ EDSTYK+FEVIL+D  H A+R +P  Q
Sbjct:    1 MGAYRYMQELWRKKQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAVRRNPDTQ 149          

HSP 2 Score: 53.5286 bits (127), Expect = 1.234e-55
Identity = 29/53 (54.72%), Postives = 30/53 (56.60%), Query Frame = 2
Query:  470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKGSPCTTRHDLQEGQPWKRNQT 628
            P   WI K VHKHRE+RGLTSAGKK RGL GKG              WKR  T
Sbjct:  146 PDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197          
The following BLAST results are available for this feature:
BLAST of DY259992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
RL15_SILAS3.277e-5661.7460S ribosomal protein L15 OS=Silurus asotus GN=rpl... [more]
RL15_MONAL3.277e-5661.0760S ribosomal protein L15 OS=Monopterus albus GN=r... [more]
RL15_SILME4.272e-5661.7460S ribosomal protein L15 OS=Silurus meridionalis ... [more]
RL15_PARDA5.570e-5661.7460S ribosomal protein L15 OS=Paramisgurnus dabryan... [more]
RL15_ANGJA5.570e-5661.0760S ribosomal protein L15 OS=Anguilla japonica GN=... [more]
RL15_EPICO5.570e-5661.0760S ribosomal protein L15 OS=Epinephelus coioides ... [more]
RL15A_YEAST9.467e-5664.1460S ribosomal protein L15-A OS=Saccharomyces cerev... [more]
RL15B_YEAST9.467e-5664.1460S ribosomal protein L15-B OS=Saccharomyces cerev... [more]
RL15_PELFU1.234e-5561.0760S ribosomal protein L15 OS=Pelteobagrus fulvidra... [more]
RL15_SINKN1.234e-5559.7360S ribosomal protein L15 OS=Siniperca kneri GN=rp... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259992 ID=DY259992; Name=DY259992; organism=Citrus clementina; type=EST; length=1107bp
CATCACAGCACCCTTTAGCTCGACGATCGAACAATGGGTGCATACAAGTA
CGTGTCGGAGCTATGGAGGAAGAAGCAGTCGGATGTGATGAGGTTCTTGC
AGAGGGTGAGGTGCTGGGAGTACCGTCAGCACCCTTCCATCGTCCGCGTC
ACCCGTCCCACTCGCCCCGACAAGGCTCGCCGCTTGGGCTACAAGGCCAA
GCAGGGTTATGTCGTTTATCGTGTGCGTGTAAGACGTGGAGGACGAAAGA
GACCAGTTCCCAAGGGTATTGTATATGGTAAACCGACAAACCAGGGTGTC
ACTCAGCTTAAATTCCAGCGCAGCAAGCGTTCAGTTGCTGAGGAACGTGC
CGGTCGTAAGCTTGGTGGCCTTAAGGTTCTCAACTCATACTGGATCAATG
AGGATTCAACTTACAAGTACTTTGAGGTAATCCTGGTGGATGCTGCCCAC
AATGCTATCCGCAATGACCCCCAGGATCAACTGGATCTGTAAGCCTGTCC
ACAAGCACAGGGAGCTTCGTGGACTCACTTCTGCTGGGAAGAAGTACAGA
GGTCTCCGAGGAAAGGGGTCACCTTGCACCACAAGGCACGACCTTCAAGA
AGGGCAACCCTGGAAGAGGAACCAGACTCCTCTCTCTCAGGCGTTACCGT
TAAACCTTCTGGATTGGTTACTTGGTGTTTTTTCACATTTATCAACCTAG
TTTAAATTCCGTTGGAGTTTGGAACCCCGAAAACAAGGTGTTTTTGGTTA
GTTTTTTGCTGCCACACGGGTCTAATTTTTGATTTCACTTGGGCCAATTG
AAATTTTGTAAATTCCAAAGGATTTGTTTTATCCAAAAAAATACACTCCA
GAATTGTGGGGGGGACACGTTCCCTGCCCGGCCCAAAAAAAATAAAAAAA
AAAACCGCCCTTTTTCTTGCGCACATTTTGGTTCATAAAAATAAAACCAT
ATACAGACGAAGTTGTGGAGCGACGGGTCAGGGGCACTATGCGATGTGAT
ACTAGAACAGACTTGATTTTTGCTTCCCGCGCGCAACCGGGCAGCTATTG
GCGTGTCACGCATATACGATGGAATATGCTAACGGTTCTGCCTCAGCCAG
CGCTACA
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