DY259992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15E_METM6 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl15e PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 8.411e-31 Identity = 56/145 (38.62%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRND 468 M Y YV E W+ + ++ LQ R ++R+ PS++RV RPTR D+AR LGYKAKQ KP+ G+ ++ +S + +AEERA +K L+VLNSYW+ +D K++EVILVD+ H +I++D Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSD 143 HSP 2 Score: 46.2098 bits (108), Expect = 8.411e-31 Identity = 21/30 (70.00%), Postives = 22/30 (73.33%), Query Frame = 2 Query: 479 NWICKPVHKHRELRGLTSAGKKYRGLRGKG 568 NW+CK HK R RGLTSAGKK RGL KG Sbjct: 147 NWLCKGTHKGRATRGLTSAGKKGRGLMYKG 176
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15E_PYRFU (50S ribosomal protein L15e OS=Pyrococcus furiosus GN=rpl15e PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.426e-30 Identity = 57/147 (38.78%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQ 474 MG YKY+ E W+ + + L + R ++R+ P +VR+ RPTR D+AR LGY+AKQ KP+ G + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+ Sbjct: 1 MGMYKYIREAWKSPKKSYVGELLKQRMIKWRREPVVVRIERPTRLDRARALGYQAKQGYVIVRVRVRKGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPK 145 HSP 2 Score: 45.4394 bits (106), Expect = 1.426e-30 Identity = 22/33 (66.67%), Postives = 23/33 (69.70%), Query Frame = 2 Query: 470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKG 568 P+I WI HK R RGLTSAGKK RGLR KG Sbjct: 144 PKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKG 176
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15E_METM5 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl15e PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.101e-30 Identity = 54/145 (37.24%), Postives = 80/145 (55.17%), Query Frame = 1 Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRND 468 M Y YV E W+ + ++ LQ R ++R+ PS++R+ RPTR D+AR LGYKAKQ KP G+ ++ +S + +AEERA +K ++VLNSYW+ +D K++EVILVD +I+ND Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVIRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATMGINKITMAKSIQRIAEERAAKKYPNMEVLNSYWVGQDGKQKWYEVILVDPCQPSIKND 143 HSP 2 Score: 45.8246 bits (107), Expect = 4.101e-30 Identity = 21/30 (70.00%), Postives = 22/30 (73.33%), Query Frame = 2 Query: 479 NWICKPVHKHRELRGLTSAGKKYRGLRGKG 568 NW+CK HK R RGLTSAGKK RGL KG Sbjct: 147 NWLCKGTHKGRVTRGLTSAGKKGRGLMYKG 176
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15E_DESK1 (50S ribosomal protein L15e OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl15e PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 9.026e-30 Identity = 61/143 (42.66%), Postives = 81/143 (56.64%), Query Frame = 1 Query: 43 YKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDP 471 Y Y++E W++K + + L R R E+R+ PS+VR+ +PTR DKAR LGYKAK +P GV +S R +AEERA RK GL+VLNSY++ ED YK++EVILVD H +I NDP Sbjct: 6 YHYIAEAWKEKSRE-LEALIRQRLIEWRREPSVVRLEKPTRLDKARALGYKAKVGFIIVRVRVRKGGQRKPRPDS--GRRPKRMGVYGYAPAKSLRLIAEERAARKFPGLEVLNSYYVAEDGRYKWYEVILVDPHHPSICNDP 145 HSP 2 Score: 47.3654 bits (111), Expect = 9.026e-30 Identity = 20/30 (66.67%), Postives = 24/30 (80.00%), Query Frame = 2 Query: 470 PRINWICKPVHKHRELRGLTSAGKKYRGLR 559 P +NWIC+P ++ R RGLTSAGKK RGLR Sbjct: 145 PDVNWICEPQNRGRVFRGLTSAGKKMRGLR 174
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15E_PYRKO (50S ribosomal protein L15e OS=Pyrococcus kodakaraensis GN=rpl15e PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.535e-29 Identity = 56/147 (38.10%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQ 474 MG YKY+ E W+ + + L + R ++R+ P + R+ RPTR D+AR LGY+AKQ KP+ G+ + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+ Sbjct: 1 MGMYKYIREAWKSPKKSYVGELLKKRMIQWRRDPVVKRIERPTRLDRARSLGYQAKQGYVVVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPK 145 HSP 2 Score: 43.1282 bits (100), Expect = 1.535e-29 Identity = 20/33 (60.61%), Postives = 22/33 (66.67%), Query Frame = 2 Query: 470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKG 568 P+I WI HK R RGLTSAGK+ RGL KG Sbjct: 144 PKIAWIAGKAHKGRVFRGLTSAGKRSRGLLNKG 176
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15E_AERPE (50S ribosomal protein L15e OS=Aeropyrum pernix GN=rpl15e PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.395e-29 Identity = 60/147 (40.82%), Postives = 80/147 (54.42%), Query Frame = 1 Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQ 474 + Y Y++ W+K + L + R E+R+ PSI+RV +PTR D+AR LGYKAKQ +P GV +S R +AEERA RK L VLNSY++ ED YK++EVILVD H AI+NDP+ Sbjct: 3 LSMYHYIAREWKKPYEGLHGELMKARLLEWRRQPSILRVEKPTRLDRARALGYKAKQGVIVARVRVRKGGRRKPRPNK--GRRPKRMGVYGFAPAKSLRLIAEERAQRKYPNLVVLNSYYVGEDGRYKWYEVILVDPNHPAIKNDPE 147 HSP 2 Score: 43.5134 bits (101), Expect = 4.395e-29 Identity = 19/30 (63.33%), Postives = 21/30 (70.00%), Query Frame = 2 Query: 470 PRINWICKPVHKHRELRGLTSAGKKYRGLR 559 P +NW+ HK R RGLTSAGKK RGLR Sbjct: 146 PELNWVTTGKHKGRPFRGLTSAGKKMRGLR 175
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15E_METTH (50S ribosomal protein L15e OS=Methanobacterium thermoautotrophicum GN=rpl15e PE=3 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 9.756e-29 Identity = 56/144 (38.89%), Postives = 80/144 (55.56%), Query Frame = 1 Query: 43 YKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQ 474 Y+YV + W+ + +R L R ++R+ P I R+ RPTR D+AR LGY+AK +PT GV ++ +S + +AEER RK ++VLNSYW+ ED YK++EVILVD H AI+NDP+ Sbjct: 3 YRYVKDAWKNPKDSYVRELMWERAPKWRRDPVIKRIERPTRIDRARALGYRAKPGYIVVRTRVRRGSQRKTRFK--AGRRPTRMGVKKITTAKSIKRIAEERVARKYPNMEVLNSYWVWEDGKYKFYEVILVDPNHLAIKNDPK 144 HSP 2 Score: 43.1282 bits (100), Expect = 9.756e-29 Identity = 19/33 (57.58%), Postives = 22/33 (66.67%), Query Frame = 2 Query: 470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKG 568 P+I WIC H+ R RGL S GKK RGLR +G Sbjct: 143 PKIYWICVKQHRGRVFRGLISEGKKNRGLRNRG 175
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15E_METST (50S ribosomal protein L15e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl15e PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.364e-27 Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 1 Query: 43 YKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRND 468 YKY+ E W+ ++ L R R ++R+ P I+R+ +PTR D+ARRLGYKAK G+ P GV ++ ++S + +AEER RK L+VLNSYW+ ED KY+EVILVD +I++D Sbjct: 7 YKYMKEAWKNPDESYVKELMRERLPKWRRQPVIIRIDKPTRIDRARRLGYKAKTGYVVARIRVRRGSRRKSRFKN---GRDPKRMGVNKISGEKSIQRMAEERVARKYPNLEVLNSYWVWEDGKAKYYEVILVDPQCPSIQHD 146 HSP 2 Score: 46.595 bits (109), Expect = 1.364e-27 Identity = 21/32 (65.62%), Postives = 22/32 (68.75%), Query Frame = 2 Query: 473 RINWICKPVHKHRELRGLTSAGKKYRGLRGKG 568 +INWIC H R RGLTSAGKK RGL KG Sbjct: 148 KINWICSKKHTRRAFRGLTSAGKKGRGLNKKG 179
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15E_METMP (50S ribosomal protein L15e OS=Methanococcus maripaludis GN=rpl15e PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.006e-27 Identity = 53/145 (36.55%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRND 468 M Y YV E W+ + ++ LQ R ++R+ PS++R+ RPTR D+AR LGYKAKQ KP G+ ++ +S + +AEERA ++ ++VLNSYW+ +D K++E+ILVD H +I+ND Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVLRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVGQDGKQKWYEIILVDPCHPSIKND 143 HSP 2 Score: 36.1946 bits (82), Expect = 3.006e-27 Identity = 18/30 (60.00%), Postives = 20/30 (66.67%), Query Frame = 2 Query: 479 NWICKPVHKHRELRGLTSAGKKYRGLRGKG 568 +W+ HK R RGLTSAGKK RGL KG Sbjct: 147 SWLSTGNHKGRANRGLTSAGKKGRGLMYKG 176
BLAST of DY259992 vs. ExPASy Swiss-Prot
Match: RL15E_METKA (50S ribosomal protein L15e OS=Methanopyrus kandleri GN=rpl15e PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 5.092e-27 Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = 1 Query: 43 YKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRND 468 YKY E W++ + + L + R ++R+ PS+ R+ RPTR ++ARRLGY+AK +P G + +SK+ +AEERA RK L+VLNSYW+ ED YKY+EVI+VD H I++D Sbjct: 7 YKYQREAWKRPKDSYVGELLKERLPKWRKGPSVQRIKRPTRIERARRLGYRAKPGYVVVRVRVPKGGRRKSRPKK--GRRPKRMGKNKFSPGKSKQWIAEERAQRKYPNLEVLNSYWVGEDGQYKYYEVIMVDPYHPQIKSD 146 HSP 2 Score: 43.5134 bits (101), Expect = 5.092e-27 Identity = 20/32 (62.50%), Postives = 22/32 (68.75%), Query Frame = 2 Query: 473 RINWICKPVHKHRELRGLTSAGKKYRGLRGKG 568 RINWIC+ K R RG T AGKK RGLR +G Sbjct: 148 RINWICQKSQKGRVFRGKTGAGKKARGLRKRG 179 The following BLAST results are available for this feature:
BLAST of DY259992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259992 ID=DY259992; Name=DY259992; organism=Citrus clementina; type=EST; length=1107bpback to top |