DY259996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 4.026e-39 Identity = 81/151 (53.64%), Postives = 114/151 (75.50%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 558 MGRG+V L+RIENKI+RQVTF+KRR+GLLKKA+E+S+LCDAEVAL++FS G+L+++S+ S M + LERY+RY YA + A + N EY LKA +E+LQ++Q++ +GEDLA L+ EL+ +E Q+ LK IRSRK Q++L + Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDEL 151
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 5.813e-38 Identity = 77/153 (50.33%), Postives = 118/153 (77.12%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 561 MGRG+V+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAE+AL++FS +GKL+E+ S+ S M R +++Y ++ YA + + + +Y KLK+R+E+LQ +Q+H +GE+L+++ + EL+ +E+Q+D+ L+ IRS K + ML +S Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMDPNQSAKDLQDKYQ-DYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLS 152
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 2.209e-37 Identity = 79/151 (52.32%), Postives = 112/151 (74.17%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 558 MGRGRV++KRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEVALI+FS++GKL+E+ + +E +ERY R CY E +W E +KLK++ E L R ++ +GEDL ++ +KELQ++E+Q+++ L R RK Q+M++ + Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVG-IESTIERYNR-CYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEM 149
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.768e-37 Identity = 80/152 (52.63%), Postives = 110/152 (72.37%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 561 MGRGRV+LK IENKINRQVTF+KRR LLKKA+E+SVLCDAEVALI+FS +GKL+E+ + + M + LE+Y++ + + E + EY KLK R+E LQR+Q++ +GEDL L KEL+ +E+Q+DS L+ IRS + Q ML ++ Sbjct: 1 MGRGRVELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSTSMLKTLEKYQKCNFGSPESTIISRETQSS-QQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLA 151
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 1.432e-36 Identity = 79/155 (50.97%), Postives = 117/155 (75.48%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERYCYAERQLQANEI-----EPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQ 552 MGRG+VQ++RIEN+++RQVTFSKRR GLLKKAHEI+VLCD +VA IVFS KG LF Y S+ + MERILE+Y+R+ E + N + E G+ + ++ KL+ R+E L+++Q++ MG++L L+L+++Q +E QID+ L IRSRK +L+++ Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRH---ELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLME 152
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 9.281e-36 Identity = 81/152 (53.29%), Postives = 109/152 (71.71%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST-DSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 558 MGRG++++KRIEN NRQVTFSKRR GLLKKAHE+SVLCDAE+ LI+FS+ GKLFEYS+ S M++I+ERY++ A + E + N + E +++K E LQ N + MGEDL L++ EL + QQ++S +RSRKNQLMLQ + Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKVSGA----RITEYD-NQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQL 147
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 7.857e-35 Identity = 71/154 (46.10%), Postives = 115/154 (74.68%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYER--YCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 561 MGRGR+++KRIEN +RQVTF KRR+GLLKKA+E+SVLCDAEVALIVFS++G+L+EYS ++ ++ ++RY++ C + E+ + E +KL+ ++++LQ KH +G+++++LSLKEL+ +E +++ G+ IR+RKN+L+ I+ Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEIN 154
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.899e-34 Identity = 74/152 (48.68%), Postives = 116/152 (76.32%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 558 +GRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFS++G+L+EY+ +S ++ +ERY++ C ++ + E N + E SKL+A++ LQ ++F+GE LA L+L++L+++EQ+I+ G+ IR++KN+L+ I Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VKATIERYKKAC-SDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEI 166
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.093e-34 Identity = 75/152 (49.34%), Postives = 115/152 (75.66%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 558 +GRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFS++G+L+EY+ +S ++ +ERY++ C ++ + E N + E SKL+A++ LQ ++ +GE LA LSL++L+++EQ+I+ G+ IRS+KN+L+ I Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VKATIERYKKAC-SDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEI 166
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 6.651e-34 Identity = 76/151 (50.33%), Postives = 108/151 (71.52%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 558 MGRG+V++KRIENKI RQVTFSKR+SGLLKKA+E+SVLCDAEV+LI+FST GKL+E+S + R +ERY Y + L + +E E +KLK + E L R ++ +GEDL +S+KELQ++E+Q++ L R +K Q+M++ + Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVG-VGRTIERY--YRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQM 148 The following BLAST results are available for this feature:
BLAST of DY259996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259996 ID=DY259996; Name=DY259996; organism=Citrus clementina; type=EST; length=937bpback to top |