DY260005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2J1_HUMAN (Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens GN=UBE2J1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 2.167e-11 Identity = 39/112 (34.82%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL---KEQWSPALTISKVLLPICSLL 519 A KR++KE +L KDP A P+ +++F W T+ GP DS + GGV+ I PP+YP +PP + T + +CL I E W P+ +I LL I + Sbjct: 11 AVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTA--NGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM 119
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC12_CAEEL (NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.831e-11 Identity = 43/136 (31.62%), Postives = 64/136 (47.06%), Query Frame = 1 Query: 238 PPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQ------WSPALTISKVLLPICSLLTD-PNPDDPLVPEIAPMYQSDKAKYESPARNWTQKY 624 P TSC H + P + Y GG F I PP+Y PP V TKV+HPNIN +GS+CL IL++ W P ++ V+ + SL D + +D L + A M+ ++ + R + +Y Sbjct: 53 PSTSC---------LHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.697e-11 Identity = 36/113 (31.86%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCL---DILKEQWSPALTISKVLLPICSLLT 522 + KR+ KE K + +PP SA P E++ W I GP +P+ G + + FP +YPF+PP ++ T + N LCL D + W+PA +++ +L + S +T Sbjct: 6 SQKRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMITP--NGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFMT 116
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC17_CAEEL (Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis elegans GN=ubc-17 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.697e-11 Identity = 44/122 (36.07%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 196 SKRILKELKDLQKDPPTSCSAGPVA------EDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTK-----VFHPNINSNGSLCLDIL-------KEQWSPALTISKVLLPI 507 +KRI KEL + P + S D+ + I GP D+PYA G+F I FP YPF PPK AF T F+PN+ ++G +CL IL +E+W+P ++ +VL+ I Sbjct: 411 TKRIAKELASIANALPLNASNSIYVCYDEGRVDII--KVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCSLMQVLVSI 530 The following BLAST results are available for this feature:
BLAST of DY260005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260005 ID=DY260005; Name=DY260005; organism=Citrus clementina; type=EST; length=962bpback to top |