DY260009

Overview
NameDY260009
Unique NameDY260009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length978
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260009 vs. ExPASy Swiss-Prot
Match: THI4_FERNB (Putative thiazole biosynthetic enzyme OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1422 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.803e-14
Identity = 50/173 (28.90%), Postives = 84/173 (48.55%), Query Frame = 2
Query:  278 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEPKGGVSSCGH 796
            +K+  +S+ + + Y   +    + D    G G + L+ A EL+KN   ++AI E    PGGG W GG +F+ +V+      +L E  I Y ++D ++V+   A+  ++ M     +    +FN V  EDL++   R+ GVV NW         +  +DP  +  K  V   GH
Sbjct:    3 MKDLKISQLIVKHYFQKLNDVLNVDVAIAGCGPSALALATELAKNGR-KVAIFEAKNEPGGGIWGGGMMFNELVLESELEWYLKEHHIKYKKEDEFIVVD--AVHFASAMLYNATKNGAYIFNNVFVEDLVMYNERISGVVINWMPTIKE---KLHVDPITVVAKFTVDGTGH 169          
BLAST of DY260009 vs. ExPASy Swiss-Prot
Match: THI4_SULIM (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.155e-14
Identity = 51/180 (28.33%), Postives = 86/180 (47.78%), Query Frame = 2
Query:  266 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEPKGGVSSCGHD 799
            K   ++E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K  V + GHD
Sbjct:    4 KIKQVEEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY260009 vs. ExPASy Swiss-Prot
Match: THI4_SULSO (Putative thiazole biosynthetic enzyme OS=Sulfolobus solfataricus GN=SSO0436 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.065e-13
Identity = 52/180 (28.89%), Postives = 85/180 (47.22%), Query Frame = 2
Query:  266 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEPKGGVSSCGHD 799
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ I   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K  V + GHD
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNIRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY260009 vs. ExPASy Swiss-Prot
Match: THI4_SULIY (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1786 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.391e-13
Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 2
Query:  266 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEPKGGVSSCGHD 799
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K  V + GHD
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY260009 vs. ExPASy Swiss-Prot
Match: THI4_SULIN (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_1140 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.391e-13
Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 2
Query:  266 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEPKGGVSSCGHD 799
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K  V + GHD
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY260009 vs. ExPASy Swiss-Prot
Match: THI4_SULIL (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1798 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.391e-13
Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 2
Query:  266 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEPKGGVSSCGHD 799
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K  V + GHD
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY260009 vs. ExPASy Swiss-Prot
Match: THI4_SULIK (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_1717 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.391e-13
Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 2
Query:  266 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEPKGGVSSCGHD 799
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K  V + GHD
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY260009 vs. ExPASy Swiss-Prot
Match: THI4_SULIA (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_1786 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.391e-13
Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 2
Query:  266 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEPKGGVSSCGHD 799
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K  V + GHD
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY260009 vs. ExPASy Swiss-Prot
Match: THI4_METBU (Putative thiazole biosynthetic enzyme OS=Methanococcoides burtonii (strain DSM 6242) GN=Mbur_2109 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.391e-13
Identity = 49/174 (28.16%), Postives = 84/174 (48.28%), Query Frame = 2
Query:  278 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEPKGGVSSCGH 796
            + E  +SR +   +    + Y D D    G G A L  A  L++   ++  I E+ ++ GGG W GG +F  +VV++ A   LDE GI Y E +N   + ++      ++S   +    ++FN V  ED++++    + G+V NW  V +    +  +DP  +  K  V   GH
Sbjct:    3 LDEVTISRAIIEEFSKVFLDYTDVDVALVGGGPANLVAAKYLAE-AGLKTVIYEKKLAVGGGMWAGGMMFPRIVVQEDALHILDEFGISYHEYENGYYVANSIESVGKLISGATS-AGAEIFNLVNVEDVMIRENDEICGLVINWTAVEIG---KLHVDPLAIRSKVVVDGTGH 171          
BLAST of DY260009 vs. ExPASy Swiss-Prot
Match: THI4_METTP (Putative thiazole biosynthetic enzyme OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1121 PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.373e-13
Identity = 53/179 (29.61%), Postives = 89/179 (49.72%), Query Frame = 2
Query:  278 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEPKGGVSSCGHD 799
            + E  ++R +   Y+   +   D D    GAG A L  A  L++  ++++ + E+ +S GGG W GG +F  +VV+K A   LDE  I Y E ++ Y V       +  +++KL A       +L N V+ ED++++ G R+ G+V NW    M       +DP  +  +  +   GHD
Sbjct:    3 LDEVKITRAIVESYLESFLKCTDVDVALVGAGPANLVAAKRLAE-ADVRVVLFEKRLSVGGGLWGGGMMFPRIVVQKEACRILDEYDIWYREFEEGYYVAD-----SIEVVAKLTAGAIDAGAELINLVSVEDVMIREGDRIVGLVINWTAADM---AGIHVDPLAIRARVVIDGTGHD 172          
The following BLAST results are available for this feature:
BLAST of DY260009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
THI4_FERNB2.803e-1428.90Putative thiazole biosynthetic enzyme OS=Fervidoba... [more]
THI4_SULIM8.155e-1428.33Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULSO1.065e-1328.89Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIY1.391e-1328.33Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIN1.391e-1328.33Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIL1.391e-1328.33Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIK1.391e-1328.33Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIA1.391e-1328.33Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METBU1.391e-1328.16Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METTP2.373e-1329.61Putative thiazole biosynthetic enzyme OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YO22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260009 ID=DY260009; Name=DY260009; organism=Citrus clementina; type=EST; length=978bp
CACTGCTGCAAATCTAATTACTTCTCATTATCAAACTTCTAAGCAGCAGG
GGAAGGAGGGGTTAAAAAAAAAAAACATGGCAGCCATGACTTCTACAGCT
TTCGCTCCTTCAGTTTCGTCCACCACCAATAAGCTCTTTGACTCATCCTT
TCATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCATCAAAT
CTTCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTAT
GACTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCG
TGAAATGACACGCAGGTACATGACGGACATGATCACTTATGCTGACACTG
ATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAG
CTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAG
CCCCGGCGGTGGCGCGTGGCTCGGTGGACAGCTCTTCTCTGCCATGGTTG
TGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGAT
GAGCAAGACAACTATGTTGTGATCAAGCATGCAGCGCTGTTCACCTCCAC
TATAATGAGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAG
TGGCAGCCGAGGATTTGATAGTCAAAGGCGGCAGAGTTGGTGGTGTGGTG
ACCAACTGGGCGTTGGTGTCAATGAATCACGATACACAGTCCTGCATGGA
TCCCAATGTAATGGAACCCAAGGGTGGTGTGAGCTCTTGTGGCCATGATG
GCCCTTTTGGGGCCCTGAAGTAAAAAGTTTGAAAATATCGGAAAGATTGA
GGAATTGCCCGAATGAAAGGCCTGGAACATGAACCCCGCAAAAAAGCCAA
TGGAAAGGCGACCCGGGAAGGTGTCCCCGGTAAGAAAATTTACGGGCCGG
AAAATTCCCAAAATTGGTGGGCCCCCCC
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