DY260020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.148e-43 Identity = 89/196 (45.41%), Postives = 113/196 (57.65%), Query Frame = 3 Query: 162 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEISPPSPHCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWMTAQPPKPSCHEVLTDEWKPSANDLNPGRLPGYRPTHNIIH 749 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG +G++T R +EIAAFF T HETTGG A + GYCF+ + +YYGRGPIQLT NY + ATD +SF++AIWFWMT Q KPS H+V+ W PSA D R+PGY NII+ Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-----------RYYGRGPIQLTNRNNYEKA--GTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIIN 207 HSP 2 Score: 27.7202 bits (60), Expect = 3.148e-43 Identity = 13/27 (48.15%), Postives = 16/27 (59.26%), Query Frame = 1 Query: 751 GGIECGPRWNDPVPNRIGSLTTFRGQV 831 GGIECG ND V +RIG + G + Sbjct: 208 GGIECGIGRNDAVEDRIGYYRRYCGML 234
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 7.545e-42 Identity = 89/196 (45.41%), Postives = 112/196 (57.14%), Query Frame = 3 Query: 162 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEISPPSPHCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWMTAQPPKPSCHEVLTDEWKPSANDLNPGRLPGYRPTHNIIH 749 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG SG++T R +EIAAFF T HETTGG A + GYCF+ + +YYGRGPIQLT NY + ATD +SF++AIWFWMT Q KPS H+V+ W PSA D + R PG NII+ Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-----------RYYGRGPIQLTNQNNYEKA--GNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIIN 207 HSP 2 Score: 24.6386 bits (52), Expect = 7.545e-42 Identity = 12/27 (44.44%), Postives = 15/27 (55.56%), Query Frame = 1 Query: 751 GGIECGPRWNDPVPNRIGSLTTFRGQV 831 GGIECG N V +RIG + G + Sbjct: 208 GGIECGVGPNAAVEDRIGYYRRYCGML 234
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.653e-39 Identity = 90/223 (40.36%), Postives = 123/223 (55.16%), Query Frame = 3 Query: 93 ARNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEISPPSPHC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWMTAQ-PPKPSCHEVLTDEWKPSANDLNPGRLPGYRPTHNII 746 +R+ G V T G + +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ R RE+AAF A T H T+ GG Y+WGYC+ S C N +PC GK Y+ RGP+Q+ +NYNY ATDP ++F++A+W WMTA+ P +PS H V+T +W P+ D GR PGY T NI+ Sbjct: 74 SRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY--GAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNIL 287
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.653e-39 Identity = 90/223 (40.36%), Postives = 123/223 (55.16%), Query Frame = 3 Query: 93 ARNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEISPPSPHC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWMTAQ-PPKPSCHEVLTDEWKPSANDLNPGRLPGYRPTHNII 746 +R+ G V T G + +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ R RE+AAF A T H T+ GG Y+WGYC+ S C N +PC GK Y+ RGP+Q+ +NYNY ATDP ++F++A+W WMTA+ P +PS H V+T +W P+ D GR PGY T NI+ Sbjct: 74 SRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY--GAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNIL 287
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.899e-37 Identity = 82/195 (42.05%), Postives = 105/195 (53.85%), Query Frame = 3 Query: 162 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEISPPSPHCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWMTAQPPKPSCHEVLTDEWKPSANDLNPGRLPGYRPTHNII 746 + +IS +FE +L +R GFYTYDAFI AAK+FPAF +G+ +R RE+AAF A T HETTGGW AP G Y G Y+GRGPIQ+++NYNY +D + F++A+WFWMT Q PKPS H+V+T W PS+ D GR+PGY NII Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG-------------------STSDYFGRGPIQISYNYNY--GAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNII 166 HSP 2 Score: 22.7126 bits (47), Expect = 3.899e-37 Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = 1 Query: 751 GGIECGPRWNDPVPNRIG 804 GG+ECG V +RIG Sbjct: 168 GGVECGKGQESHVADRIG 185
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 3.576e-26 Identity = 72/210 (34.29%), Postives = 111/210 (52.86%), Query Frame = 3 Query: 135 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEIS-PPSPHC-NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWMTAQPPKPSCHEVLTDEWKPSANDLNPGRLPGYRPTHNIIHR 752 +G+ T +++ +F+ + +R D CP++GFY+Y +F+ AA++FPAFG G+ R RE+AAF A T+G D +AWG C I+ + + C + ++PC KY RGPIQLT N+NY DP++SF++A+WFWM+ KPSCH+++ + +AN R+P NII R Sbjct: 121 SGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY--GLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVLNA-NSAAN-----RIPNKGVIGNIISR 319
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 8.244e-23 Identity = 67/181 (37.02%), Postives = 93/181 (51.38%), Query Frame = 3 Query: 102 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEISPPSPH----CNLNYPC-RGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFW 626 CG+G G D T+ + I++ E F L+ +D C A+GFYT DAF+ AA +P+FG +G+ REIAAFFA HET +C+I EI PS + + +PC GK YYGRGP+Q++WN+NY A PVL+FQ+A+W+W Sbjct: 49 CGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVAQADD-GCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY--GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYW 212
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.399e-22 Identity = 64/186 (34.41%), Postives = 89/186 (47.85%), Query Frame = 3 Query: 87 GPARNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEISPPSPHC---NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWM 629 GP R+ G G G G G+ G + +++ F + C + FYT AF+ A A+P F + G E REIAAFFA HET +C+ISEI+ + +C N +PC KYYGRGP+Q++WNYNY A D V++F++A+WFWM Sbjct: 56 GPCRSGGGGGG-GGGGGGGGSGGANVANVVTDAFFNGIKNQAGS-GCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 224
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.463e-21 Identity = 60/188 (31.91%), Postives = 88/188 (46.81%), Query Frame = 3 Query: 102 CGSGVVCGERDTGHGTDGG-----ELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEISPPSPHCN---LNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWMTA 635 CG G G +G G G + +++ F + C + FYT AF+ A K +P F + G++ REIAAFFA HET +C+ISEI+ + +C+ +PC KYYGRGP+Q++WNYNY A D V++F++A+WFWM + Sbjct: 44 CGDGCQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGIKNQAGS-GCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 215
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.932e-20 Identity = 67/191 (35.08%), Postives = 94/191 (49.21%), Query Frame = 3 Query: 102 CGSGVVCGERDTGHGTD----GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PHCNLN---YPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWMTAQPP 644 CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + REIA FA HET +C+I EI+ S +C+ N YPC GK Y+GRGPIQL+WNYNY C +++P ++F++ +WFWM + P Sbjct: 48 CGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGG-GCAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC--GQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP 218 The following BLAST results are available for this feature:
BLAST of DY260020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260020 ID=DY260020; Name=DY260020; organism=Citrus clementina; type=EST; length=1058bpback to top |