DY260056

Overview
NameDY260056
Unique NameDY260056
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length931
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_HAEIG (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain PittGG) GN=apt PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.170e-45
Identity = 90/157 (57.32%), Postives = 118/157 (75.16%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 575
            I S+I+ IP++PK GI+F+DITTLL    AF+ TIDL VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+ Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G +RL
Sbjct:    8 IKSSIKSIPNYPKEGIIFRDITTLLEVPAAFKATIDLIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVINLPELGGEKRL 164          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_HAEIE (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain PittEE) GN=apt PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.170e-45
Identity = 90/157 (57.32%), Postives = 118/157 (75.16%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 575
            I S+I+ IP++PK GI+F+DITTLL    AF+ TIDL VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+ Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G +RL
Sbjct:    8 IKSSIKSIPNYPKEGIIFRDITTLLEVPAAFKATIDLIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGTVKHAAFVINLPELGGEKRL 164          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_HAEI8 (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=apt PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.170e-45
Identity = 90/157 (57.32%), Postives = 118/157 (75.16%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 575
            I S+I+ IP++PK GI+F+DITTLL    AF+ TIDL VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+ Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G +RL
Sbjct:    8 IKSSIKSIPNYPKEGIIFRDITTLLEVPAAFKATIDLIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVINLPELGGEKRL 164          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_SHESH (Adenine phosphoribosyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=apt PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.834e-45
Identity = 84/167 (50.30%), Postives = 120/167 (71.86%), Query Frame = 3
Query:   75 VKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 575
            +   +  +A I  +I+ IPD+PKPGI+F+D+T+LL D  A++ T+D+ VE+YKD+  + V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+HV A+   ++ L++DDL+ATGGT+ A ++L+  +G  V   A VI LP+L G +RL
Sbjct:    2 ISMNNDTLAVIKQSIKTIPDYPKPGILFRDVTSLLEDHTAYKATMDILVEKYKDQGFTKVVGTEARGFLFGAPLALELGLGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINENDKVLVIDDLLATGGTIEATVKLIRNLGGKVNHAAFVISLPDLGGEKRL 168          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_SHEAM (Adenine phosphoribosyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=apt PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.702e-45
Identity = 85/160 (53.12%), Postives = 117/160 (73.12%), Query Frame = 3
Query:   96 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 575
            +A I  +I+ IPD+PK GIMF+D+T+LL D  A++  + L VERYKD   + V G E+RGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++AG++ L++DDL+ATGGT+ A ++L+ R+G  V   A VI LP+L G +RL
Sbjct:    6 LALIKQSIKTIPDYPKAGIMFRDVTSLLEDHTAYQTAMKLLVERYKDSGFTKVVGTESRGFLFGAPLALELGVGFVPVRKPGKLPRETISESYELEYGHDTLEIHVDAIKAGDKVLVIDDLLATGGTIEATVKLIRRLGGDVAHAAFVISLPDLGGEKRL 165          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_CLOPS (Adenine phosphoribosyltransferase OS=Clostridium perfringens (strain SM101 / Type A) GN=apt PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.834e-45
Identity = 88/157 (56.05%), Postives = 113/157 (71.97%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 575
            +   IRVI DFPK GI F+DITTL+ D +  RD++D   E +KDKNI VV G EARGFIFG P+A A+G  F+P+RKP KLPG+ +  EY LEYGKD +E+H  A++ G R  IVDDL+ATGGT++A  +L+E+ G  V   A  IEL ELKGR++L
Sbjct:    3 LKDKIRVIEDFPKKGISFKDITTLIADGEGLRDSVDQMAEFFKDKNIDVVVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRVEYDLEYGKDALEIHKDAIKPGMRVAIVDDLLATGGTIAAVAKLVEQAGGEVAGLAFTIELTELKGRDKL 159          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_CLOPE (Adenine phosphoribosyltransferase OS=Clostridium perfringens GN=apt PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.834e-45
Identity = 88/157 (56.05%), Postives = 113/157 (71.97%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 575
            +   IRVI DFPK GI F+DITTL+ D +  RD++D   E +KDKNI VV G EARGFIFG P+A A+G  F+P+RKP KLPG+ +  EY LEYGKD +E+H  A++ G R  IVDDL+ATGGT++A  +L+E+ G  V   A  IEL ELKGR++L
Sbjct:    3 LKDKIRVIEDFPKKGISFKDITTLIADGEGLRDSVDQMAEFFKDKNIDVVVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRVEYDLEYGKDALEIHKDAIKPGMRVAIVDDLLATGGTIAAVAKLVEQAGGEVAGLAFTIELTELKGRDKL 159          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_CLOP1 (Adenine phosphoribosyltransferase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=apt PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.834e-45
Identity = 88/157 (56.05%), Postives = 113/157 (71.97%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 575
            +   IRVI DFPK GI F+DITTL+ D +  RD++D   E +KDKNI VV G EARGFIFG P+A A+G  F+P+RKP KLPG+ +  EY LEYGKD +E+H  A++ G R  IVDDL+ATGGT++A  +L+E+ G  V   A  IEL ELKGR++L
Sbjct:    3 LKDKIRVIEDFPKKGISFKDITTLIADGEGLRDSVDQMAEFFKDKNIDVVVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRVEYDLEYGKDALEIHKDAIKPGMRVAIVDDLLATGGTIAAVAKLVEQAGGEVAGLAFTIELTELKGRDKL 159          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_SHEWM (Adenine phosphoribosyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=apt PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.314e-45
Identity = 84/165 (50.91%), Postives = 118/165 (71.52%), Query Frame = 3
Query:   96 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPL 590
            +A I  +I+ IPD+PKPGI+F+D+T+LL D  A++ T+D+ V+ YKD   + + G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+H  A+   ++ L+VDDL+ATGGT+ A ++L+ ++G  V   A VI LP+L G +RL E  L
Sbjct:    6 LAIIKQSIKTIPDYPKPGILFRDVTSLLEDHTAYKATMDILVQHYKDHGFTKIVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRETISESYELEYGHDVLELHTDAINENDKVLVVDDLLATGGTIEATVKLIRKLGGEVKHAAFVISLPDLGGAKRLEEMDL 170          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_ENTS8 (Adenine phosphoribosyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=apt PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.314e-45
Identity = 83/160 (51.88%), Postives = 122/160 (76.25%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 584
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+ALA+G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L ++ G ERL ++
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDIGGEERLNKQ 170          
The following BLAST results are available for this feature:
BLAST of DY260056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_HAEIG2.170e-4557.32Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_HAEIE2.170e-4557.32Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_HAEI82.170e-4557.32Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_SHESH2.834e-4550.30Adenine phosphoribosyltransferase OS=Shewanella se... [more]
APT_SHEAM3.702e-4553.13Adenine phosphoribosyltransferase OS=Shewanella am... [more]
APT_CLOPS4.834e-4556.05Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_CLOPE4.834e-4556.05Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_CLOP14.834e-4556.05Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_SHEWM6.314e-4550.91Adenine phosphoribosyltransferase OS=Shewanella wo... [more]
APT_ENTS86.314e-4551.88Adenine phosphoribosyltransferase OS=Enterobacter ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YB20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260056 ID=DY260056; Name=DY260056; organism=Citrus clementina; type=EST; length=931bp
CTCACTGACTATTTTCGGCGTTTTGAGTAGTGAGTGGTGACTCCACCCCA
CCTCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGC
TGGGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGA
TTATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGA
GATACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGT
TGTTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCAT
TGGCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCT
GGGGAGGTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAAT
GGAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAG
ACGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTT
GAGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCC
AGAGCTAAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTG
TAAGCTAAACTTGACCTCCGGTTATGGTTTAAATGCAATGTTTGTGGACC
ATATGGGTTTCTAGTCGCTCGGGCCTCGCCCCAAGCCTTGAGAACCTTCT
AAAACCATCCGGTAATATAAAAGCAATTTCATTGGCTTTCTATTTTATTT
AACACCTTGGGGAAAGAGTGGTGGGGAAGCCGGGTTCCGTCCGCTATTGT
TGGGTTAAAAAATGAAAGGCCTATGAAAAAATTCCCTCCTCCCCTAAACC
CCCGTATTTGAAGCCTTTTCCAATTACCCGGAAATTCCAACCCAAGGGTT
TGTTGAAGGTTCCCTGGGGTGAATTTAAACC
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