DY260095

Overview
NameDY260095
Unique NameDY260095
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length887
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260095 vs. ExPASy Swiss-Prot
Match: SAR1_ASPOR (Small COPII coat GTPase sar1 OS=Aspergillus oryzae GN=sar1 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.832e-44
Identity = 94/169 (55.62%), Postives = 111/169 (65.68%), Query Frame = 2
Query:    2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508
            LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+ELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYG+G +WLSQY+
Sbjct:   24 LFLGLDNAGKTTLLHMLKNDRVAVLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189          
BLAST of DY260095 vs. ExPASy Swiss-Prot
Match: SAR1_ASPTN (Small COPII coat GTPase sar1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sar1 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.004e-44
Identity = 94/169 (55.62%), Postives = 111/169 (65.68%), Query Frame = 2
Query:    2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508
            LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+ELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYG+G +WLSQY+
Sbjct:   24 LFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDYERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189          
BLAST of DY260095 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNC (Small COPII coat GTPase SAR1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sar1 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.004e-44
Identity = 94/169 (55.62%), Postives = 111/169 (65.68%), Query Frame = 2
Query:    2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508
            LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+ELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYG+G +WLSQY+
Sbjct:   24 LFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189          
BLAST of DY260095 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.004e-44
Identity = 92/169 (54.44%), Postives = 108/169 (63.91%), Query Frame = 2
Query:    2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508
            +FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I  + F  FDLGGH+ ARRVW                    R  ESK             NVP L+LGNKID   A SEE+LR   GL   TTGKG V L + N RP+EVFMCS++++ GYG+GF+WLSQYI
Sbjct:   29 VFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197          
BLAST of DY260095 vs. ExPASy Swiss-Prot
Match: SAR1A_BOVIN (GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.004e-44
Identity = 92/169 (54.44%), Postives = 108/169 (63.91%), Query Frame = 2
Query:    2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508
            +FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I  + F  FDLGGH+ ARRVW                    R  ESK             NVP L+LGNKID   A SEE+LR   GL   TTGKG V L + N RP+EVFMCS++++ GYG+GF+WLSQYI
Sbjct:   29 VFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197          
BLAST of DY260095 vs. ExPASy Swiss-Prot
Match: SAR1_MAGGR (Small COPII coat GTPase SAR1 OS=Magnaporthe grisea GN=SAR1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.536e-44
Identity = 92/169 (54.44%), Postives = 112/169 (66.27%), Query Frame = 2
Query:    2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508
            LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   +RF E+K              VPF++LGNKID P A SEEELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYG+G +WLSQY+
Sbjct:   24 LFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEELAKVPFVILGNKIDHPEAISEEELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189          
BLAST of DY260095 vs. ExPASy Swiss-Prot
Match: SAR1_TRIRE (Small COPII coat GTPase sar1 OS=Trichoderma reesei GN=sar1 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.115e-43
Identity = 90/169 (53.25%), Postives = 111/169 (65.68%), Query Frame = 2
Query:    2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508
            LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   ERF E+K              VPF++LGNKID P A SE+ELR+ LGL   TTGKG+V L    +RP+E+FMCS+V + GYGDG +WLS Y+
Sbjct:   24 LFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFNTFDLGGHQQARRIWRDYFPDVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGRVQL--EGIRPIELFMCSVVMRQGYGDGIRWLSNYV 189          
BLAST of DY260095 vs. ExPASy Swiss-Prot
Match: SAR1_EMENI (Small COPII coat GTPase sar1 OS=Emericella nidulans GN=sar1 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.244e-43
Identity = 94/169 (55.62%), Postives = 109/169 (64.50%), Query Frame = 2
Query:    2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508
            LFLGLDNAGKTTLLHMLK++R+    PT +PTSEEL IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFLVLGNKID P A SE+ELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYG+G +WLSQY+
Sbjct:   24 LFLGLDNAGKTTLLHMLKNDRVAILSPTAHPTSEELVIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLVLGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189          
BLAST of DY260095 vs. ExPASy Swiss-Prot
Match: SAR1_CHAGB (Small COPII coat GTPase SAR1 OS=Chaetomium globosum GN=SAR1 PE=3 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 3.244e-43
Identity = 92/168 (54.76%), Postives = 110/168 (65.48%), Query Frame = 2
Query:    2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQY 505
            LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEELSIG ++F  FDLGGHQ ARR+W                   ERF E+K              VPF+VLGNKID P A SE+ELR+ LG+   TTGKGKV L    +RP+EVFMCS+V + GYGDG +WLS +
Sbjct:   24 LFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSIGNVRFTTFDLGGHQQARRLWKDYFPEVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVVLGNKIDHPDAVSEDELRHQLGMYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGDGIRWLSHF 188          
BLAST of DY260095 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.533e-43
Identity = 92/169 (54.44%), Postives = 111/169 (65.68%), Query Frame = 2
Query:    2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508
            LFLGLDNAGKTTLLHMLK++RL   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   ER +ESK              VPFL+LGNKID P A SE+EL+  LGL   TTGKG V+     +RP+EVFMCS+V + GYG+GFKWL+QY+
Sbjct:   24 LFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQ-TTGKG-VSKPVPGIRPIEVFMCSVVLRQGYGEGFKWLAQYV 190          
The following BLAST results are available for this feature:
BLAST of DY260095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
SAR1_ASPOR3.832e-4455.62Small COPII coat GTPase sar1 OS=Aspergillus oryzae... [more]
SAR1_ASPTN5.004e-4455.62Small COPII coat GTPase sar1 OS=Aspergillus terreu... [more]
SAR1_ASPNC5.004e-4455.62Small COPII coat GTPase SAR1 OS=Aspergillus niger ... [more]
SAR1A_PIG5.004e-4454.44GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A P... [more]
SAR1A_BOVIN5.004e-4454.44GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A P... [more]
SAR1_MAGGR6.536e-4454.44Small COPII coat GTPase SAR1 OS=Magnaporthe grisea... [more]
SAR1_TRIRE1.115e-4353.25Small COPII coat GTPase sar1 OS=Trichoderma reesei... [more]
SAR1_EMENI3.244e-4355.62Small COPII coat GTPase sar1 OS=Emericella nidulan... [more]
SAR1_CHAGB3.244e-4354.76Small COPII coat GTPase SAR1 OS=Chaetomium globosu... [more]
SAR1_SCHPO5.533e-4354.44Small COPII coat GTPase sar1 OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YE16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260095 ID=DY260095; Name=DY260095; organism=Citrus clementina; type=EST; length=887bp
CTTGTTTTTAGGGCTTGATAATGCTGGAAAAACAACGTTGCTTCACATGT
TGAAAGATGAGAGATTGGTTCAACATCAGCCAACACAGTATCCCACATCG
GAAGAGCTTAGTATTGGGAAAATTAAGTTCAAGGCGTTTGATTTGGGAGG
CCATCAGATTGCTAGGAGAGTCTGGAAGGATTACTATGCGAAGGTTGATG
CTGTGGTATACCTAGTGGATGCCTATGACAAAGAGAGGTTTGCAGAATCA
AAGAAAGAACTGGATGCACTCCTTTCTGATGAGGCATTGGCCAATGTTCC
TTTTCTTGTGTTAGGAAACAAGATTGACATCCCTTATGCTGCTTCTGAGG
AAGAGTTGCGTTACCACCTTGGCCTATCAAATTTCACCACTGGGAAGGGG
AAGGTTAATCTAGCGGACTCAAATGTCCGTCCACTGGAGGTGTTTATGTG
TAGCATAGTTCGCAAAATGGGATATGGTGATGGTTTCAAATGGCTCTCTC
AATACATTAAGTAGGGTAATGCTCAGGAAGTGTTATAGAAGTAATGCAGA
TTTCAAAATTTCACCCATGCCTACTACACCCTGTTTCACCAAAAAAATTG
TGTTTATCTACTTGTTTGATCTTTTATTCTGTTAGTGGGACTTGAACCAG
AGGTACTGTGTTTTGAGTCCGGTTGGAAGGTGGTAGTTATGTTACTGCTC
CGTAAAATTACCTGTGGATAGCAGGTCCTTAACCGGGAATTGAAGTTTTG
TCAATTACCTTGCCCTATTGCCAGGTCCGCCTGGGAACCCAAATTAAAAT
ATTTATTGGTAATATTTTGTTAAGGTTAATTTCAATTCCAAAACATCCCT
TAAATTATTGGAAACCTTAATTACCTTTCTAATTGGG
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