DY260125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260125 vs. ExPASy Swiss-Prot
Match: RL19_CLOBL (50S ribosomal protein L19 OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=rplS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.075e-11 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 355 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKL 648 +AIEA + +P+ GD V++ ++ E R R+ +++G V+ RQN VE FP+ SP I++I+VV KVRRA+LYYLRD++ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRDRV 104
BLAST of DY260125 vs. ExPASy Swiss-Prot
Match: RL19_CLOBK (50S ribosomal protein L19 OS=Clostridium botulinum (strain Okra / Type B1) GN=rplS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.075e-11 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 355 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKL 648 +AIEA + +P+ GD V++ ++ E R R+ +++G V+ RQN VE FP+ SP I++I+VV KVRRA+LYYLRD++ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRDRV 104
BLAST of DY260125 vs. ExPASy Swiss-Prot
Match: RL19_CLOBJ (50S ribosomal protein L19 OS=Clostridium botulinum (strain Kyoto / Type A2) GN=rplS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.075e-11 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 355 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKL 648 +AIEA + +P+ GD V++ ++ E R R+ +++G V+ RQN VE FP+ SP I++I+VV KVRRA+LYYLRD++ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRDRV 104
BLAST of DY260125 vs. ExPASy Swiss-Prot
Match: RL19_CLOBH (50S ribosomal protein L19 OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=rplS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.075e-11 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 355 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKL 648 +AIEA + +P+ GD V++ ++ E R R+ +++G V+ RQN VE FP+ SP I++I+VV KVRRA+LYYLRD++ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRDRV 104
BLAST of DY260125 vs. ExPASy Swiss-Prot
Match: RL19_CLOB6 (50S ribosomal protein L19 OS=Clostridium botulinum (strain 657 / Type Ba4) GN=rplS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.075e-11 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 355 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKL 648 +AIEA + +P+ GD V++ ++ E R R+ +++G V+ RQN VE FP+ SP I++I+VV KVRRA+LYYLRD++ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRDRV 104
BLAST of DY260125 vs. ExPASy Swiss-Prot
Match: RL19_CLOB1 (50S ribosomal protein L19 OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=rplS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.075e-11 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 355 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKL 648 +AIEA + +P+ GD V++ ++ E R R+ +++G V+ RQN VE FP+ SP I++I+VV KVRRA+LYYLRD++ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRDRV 104
BLAST of DY260125 vs. ExPASy Swiss-Prot
Match: RL19_THISH (50S ribosomal protein L19 OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=rplS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.710e-11 Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 1 Query: 361 IEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRD 642 +EA + R +PD GD V ++++V E NR RL ++G+V++++N VE VF YSP + EI+V VRRA+LYYLRD Sbjct: 8 LEAEQMNREVPDFTPGDTVVVQVKVKEGNRERLQAFEGVVIAKRNRGLNSAFTVRKISHGEGVERVFQTYSPAVAEIQVKRRGSVRRAKLYYLRD 102
BLAST of DY260125 vs. ExPASy Swiss-Prot
Match: RL19_RHIEC (50S ribosomal protein L19 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=rplS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.710e-11 Identity = 36/92 (39.13%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 373 ESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDK 645 E++R +P+ GD V + ++V E NR R+ Y+G+ ++R VE VFP+YSP I+ + VV KVRRA+LYYLRD+ Sbjct: 16 EAKRTLPEFSPGDTVRVNVKVTEGNRTRVQAYEGVCIARSGGGLQENFTVRKISYGEGVERVFPVYSPMIESVDVVRRGKVRRAKLYYLRDR 107
BLAST of DY260125 vs. ExPASy Swiss-Prot
Match: RL19_PARDP (50S ribosomal protein L19 OS=Paracoccus denitrificans (strain Pd 1222) GN=rplS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.710e-11 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 1 Query: 382 RPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDK 645 + IPD + GD V + +V E R R+ +Y+G+V+SR+ VE VFPLYS NI I VV +VRRA+LYYLRD+ Sbjct: 17 KDIPDFKAGDTVRVGYKVTEGTRTRVQMYEGVVISRKGGGIGASFTVRKISFGEGVERVFPLYSTNIDSITVVRRGRVRRAKLYYLRDR 105
BLAST of DY260125 vs. ExPASy Swiss-Prot
Match: RL19_HELMI (50S ribosomal protein L19 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rplS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.710e-11 Identity = 37/97 (38.14%), Postives = 57/97 (58.76%), Query Frame = 1 Query: 355 RAIEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRD 642 R IEA + + IPD + GD V++ ++V E NR R+ +++GIV+ R+ VE F ++SP + +I+VV +VRRA+LYYLRD Sbjct: 6 RQIEAEQLRKDIPDFKPGDTVKVHVKVVEGNRERIQLFEGIVIKRRGGGLSETFTVRRVSYGVAVERTFLVHSPRLDKIEVVRRGRVRRAKLYYLRD 102 The following BLAST results are available for this feature:
BLAST of DY260125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260125 ID=DY260125; Name=DY260125; organism=Citrus clementina; type=EST; length=1125bpback to top |