DY260142
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.501e-39 Identity = 66/105 (62.86%), Postives = 78/105 (74.29%), Query Frame = 1
Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR 573
GGACGYGNLYS GYGT+TAALSTALFNNG SCGACFE++C C G++ VTATN C GGWCNPP+ HFD+++P F +IAQ +AG+VPV YRR
Sbjct: 45 GGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRR 148 HSP 2 Score: 38.1206 bits (87), Expect = 1.501e-39 Identity = 15/20 (75.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query: 111 GWTDAPATFYGGGDASGTMG 170
GW+ ATFYGG DASGTMG
Sbjct: 26 GWSSGSATFYGGSDASGTMG 45
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.319e-39 Identity = 66/108 (61.11%), Postives = 80/108 (74.07%), Query Frame = 1
Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR 573
GGACGYGNLY++GY TNTAALSTALFN+G SCG C++I C P+WC G SI +TATNFC GGWCNPP+ HFD++QP F IA+YKAGIVP+ Y++
Sbjct: 46 GGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKK 153 HSP 2 Score: 38.5058 bits (88), Expect = 3.319e-39 Identity = 16/20 (80.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query: 111 GWTDAPATFYGGGDASGTMG 170
GW A ATFYGG DASGTMG
Sbjct: 27 GWLQAHATFYGGSDASGTMG 46
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 4.322e-39 Identity = 63/110 (57.27%), Postives = 82/110 (74.55%), Query Frame = 1
Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579
GGACGYGNLY++GYGT TAALSTALFN+G++CG C+++ C D WC+PG S+ +TATNFC GGWCNPP+ HFD++QP +E+I Y+ GI+PV Y+R P
Sbjct: 52 GGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVP 161 HSP 2 Score: 38.1206 bits (87), Expect = 4.322e-39 Identity = 16/20 (80.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query: 111 GWTDAPATFYGGGDASGTMG 170
GW A ATFYGG DASGTMG
Sbjct: 33 GWVRAHATFYGGADASGTMG 52
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 7.335e-39 Identity = 65/110 (59.09%), Postives = 81/110 (73.64%), Query Frame = 1
Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579
GGACGYGNLYS+GYGT AALSTALFN+G SCG C++I C P+WC+PG ++ +TATNFC GGWCNPP+ HFD++QP +E+I Y AGI+PV Y+R P
Sbjct: 57 GGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVP 166 HSP 2 Score: 35.8094 bits (81), Expect = 7.335e-39 Identity = 15/19 (78.95%), Postives = 15/19 (78.95%), Query Frame = 3
Query: 114 WTDAPATFYGGGDASGTMG 170
W A ATFYGG DASGTMG
Sbjct: 39 WQKAHATFYGGADASGTMG 57
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 9.548e-39 Identity = 65/110 (59.09%), Postives = 82/110 (74.55%), Query Frame = 1
Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579
GGACGYG+LYS+GYGT AALSTALFN+G SCG C++I C P+WCRPG ++ +TATNFC GGWCNPP+ HFD++QP +E+I Y+AGI+PV Y+R P
Sbjct: 70 GGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVP 179 HSP 2 Score: 35.8094 bits (81), Expect = 9.548e-39 Identity = 15/19 (78.95%), Postives = 15/19 (78.95%), Query Frame = 3
Query: 114 WTDAPATFYGGGDASGTMG 170
W A ATFYGG DASGTMG
Sbjct: 52 WLKAHATFYGGADASGTMG 70
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 2.755e-38 Identity = 63/109 (57.80%), Postives = 79/109 (72.48%), Query Frame = 1
Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC-VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579
GG+CGYGN+YS GYGTNT ALS+AL+ +G SCGAC+ + C + RWC+ G S+ VTATN+C GGWCNPP++HFD+SQP +E IA Y +GIVPV Y R P
Sbjct: 45 GGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTP 153 HSP 2 Score: 40.817 bits (94), Expect = 2.755e-38 Identity = 18/23 (78.26%), Postives = 18/23 (78.26%), Query Frame = 3
Query: 108 QGWTDAPATFYGGGDASGTMGTS 176
Q WT A ATFYGG DASGTMG S
Sbjct: 25 QQWTSATATFYGGSDASGTMGGS 47
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 1.033e-37 Identity = 69/104 (66.35%), Postives = 82/104 (78.85%), Query Frame = 1
Query: 262 GACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR 573
GACGYG+L+ +GYG TAALSTALFN G +CGAC++I CVNDP+WC PGS+ +TATNFC G WCNPPQ+HFDLS P+F +IAQYKAG+VPV YRR
Sbjct: 67 GACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFC--PPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRR 168 HSP 2 Score: 21.9422 bits (45), Expect = 1.033e-37 Identity = 8/10 (80.00%), Postives = 8/10 (80.00%), Query Frame = 3
Query: 114 WTDAPATFYG 143
W DA ATFYG
Sbjct: 48 WYDARATFYG 57
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.033e-37 Identity = 63/110 (57.27%), Postives = 80/110 (72.73%), Query Frame = 1
Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND--PRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579
GG CGYG+LYS+GYGT AALSTALFN+G SCG C++I C P+WC+PG ++ +TATNFC GGWCNPP+ HFD++QP +E+I Y AGI+PV Y+R P
Sbjct: 52 GGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVP 161 HSP 2 Score: 35.8094 bits (81), Expect = 1.033e-37 Identity = 15/19 (78.95%), Postives = 15/19 (78.95%), Query Frame = 3
Query: 114 WTDAPATFYGGGDASGTMG 170
W A ATFYGG DASGTMG
Sbjct: 34 WQKAHATFYGGADASGTMG 52
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.345e-37 Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 1
Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND--PRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579
GGACGY +LYS+GYGT AALSTALFN+G SCG C++I C P+WC+PG ++ VTATNFC GGWCNPP+ HFD++QP +E+I Y+AGI+PV Y+R P
Sbjct: 68 GGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVP 177 HSP 2 Score: 35.8094 bits (81), Expect = 1.345e-37 Identity = 15/19 (78.95%), Postives = 15/19 (78.95%), Query Frame = 3
Query: 114 WTDAPATFYGGGDASGTMG 170
W A ATFYGG DASGTMG
Sbjct: 50 WLKAHATFYGGADASGTMG 68
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.347e-37 Identity = 64/110 (58.18%), Postives = 79/110 (71.82%), Query Frame = 1
Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVN--DPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579
GGACGYGNLY GYGTNTAALS+ALFN+G SCG C++I C + +PRWC G ++ +T TN C GGWCNPP+ HFD+++P + QI YKAGIVPV Y+R P
Sbjct: 50 GGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVP 159 HSP 2 Score: 38.1206 bits (87), Expect = 1.347e-37 Identity = 15/20 (75.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query: 111 GWTDAPATFYGGGDASGTMG 170
GW+ ATFYGG DASGTMG
Sbjct: 31 GWSSGTATFYGGSDASGTMG 50 The following BLAST results are available for this feature:
BLAST of DY260142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260142 ID=DY260142; Name=DY260142; organism=Citrus clementina; type=EST; length=1067bpback to top |