DY260143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260143 vs. ExPASy Swiss-Prot
Match: FRMA_ECO57 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O157:H7 GN=frmA PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 5.997e-73 Identity = 105/182 (57.69%), Postives = 134/182 (73.63%), Query Frame = 3 Query: 9 LF*AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNV 554 L+ AEC EC+FC+SGKTNLC VR G G +M D +RFS NGQP+YH+MG STFS+YTVV +VS+AKI+P+A + VCLLGCGV TG+GAV NTAKV+PG VAVFGLG + R+I ID +PKKFD A+ FG T+ +NP D+DKPI+ V++D+ G+D++FECIGNV Sbjct: 87 LYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNV 267 HSP 2 Score: 76.6406 bits (187), Expect = 5.997e-73 Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 2 Query: 581 ACHKGWGTSVIVGVAASGPEISPPPFPLVTGPVWKGTAFGGFKSPSQVPWLVNQYLK 751 + H+GWG SVI+GVA SG EIS PF LVTG VWKG+AFGG K SQ+P +V +K Sbjct: 276 SAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMK 332
BLAST of DY260143 vs. ExPASy Swiss-Prot
Match: FRMA_ECO24 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=frmA PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 5.997e-73 Identity = 105/182 (57.69%), Postives = 134/182 (73.63%), Query Frame = 3 Query: 9 LF*AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNV 554 L+ AEC EC+FC+SGKTNLC VR G G +M D +RFS NGQP+YH+MG STFS+YTVV +VS+AKI+P+A + VCLLGCGV TG+GAV NTAKV+PG VAVFGLG + R+I ID +PKKFD A+ FG T+ +NP D+DKPI+ V++D+ G+D++FECIGNV Sbjct: 87 LYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNV 267 HSP 2 Score: 76.6406 bits (187), Expect = 5.997e-73 Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 2 Query: 581 ACHKGWGTSVIVGVAASGPEISPPPFPLVTGPVWKGTAFGGFKSPSQVPWLVNQYLK 751 + H+GWG SVI+GVA SG EIS PF LVTG VWKG+AFGG K SQ+P +V +K Sbjct: 276 SAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMK 332
BLAST of DY260143 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLI (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain K12) GN=frmA PE=1 SV=3) HSP 1 Score: 220.32 bits (560), Expect = 1.330e-72 Identity = 105/182 (57.69%), Postives = 134/182 (73.63%), Query Frame = 3 Query: 9 LF*AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNV 554 L+ AEC EC+FC+SGKTNLC VR G G +M D +RFS NGQP+YH+MG STFS+YTVV +VS+AKI+P+A + VCLLGCGV TG+GAV NTAKV+PG VAVFGLG + R+I ID +PKKFD A+ FG T+ +NP D+DKPI+ V++D+ G+D++FECIGNV Sbjct: 87 LYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNV 267 HSP 2 Score: 75.485 bits (184), Expect = 1.330e-72 Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = 2 Query: 581 ACHKGWGTSVIVGVAASGPEISPPPFPLVTGPVWKGTAFGGFKSPSQVPWLVNQYLK 751 + H+GWG SVI+GVA +G EIS PF LVTG VWKG+AFGG K SQ+P +V +K Sbjct: 276 SAHRGWGQSVIIGVAVAGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMK 332
BLAST of DY260143 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.735e-72 Identity = 104/182 (57.14%), Postives = 134/182 (73.63%), Query Frame = 3 Query: 9 LF*AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNV 554 L+ AEC EC+FC+SGKTNLC VR G G +M D +RFS NGQP+YH+MG STFS+YTVV +VS+AKI+P+A + VCLLGCGV TG+GAV NTAKV+PG VAVFGLG + R+I ID +PKKF+ A+ FG T+ +NP D+DKPI+ V++D+ G+D++FECIGNV Sbjct: 87 LYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNV 267 HSP 2 Score: 76.6406 bits (187), Expect = 1.735e-72 Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 2 Query: 581 ACHKGWGTSVIVGVAASGPEISPPPFPLVTGPVWKGTAFGGFKSPSQVPWLVNQYLK 751 + H+GWG SVI+GVA SG EIS PF LVTG VWKG+AFGG K SQ+P +V +K Sbjct: 276 SAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMK 332
BLAST of DY260143 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.735e-72 Identity = 104/182 (57.14%), Postives = 134/182 (73.63%), Query Frame = 3 Query: 9 LF*AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNV 554 L+ AEC EC+FC+SGKTNLC VR G G +M D +RFS NGQP+YH+MG STFS+YTVV +VS+AKI+P+A + VCLLGCGV TG+GAV NTAKV+PG VAVFGLG + R+I ID +PKKF+ A+ FG T+ +NP D+DKPI+ V++D+ G+D++FECIGNV Sbjct: 87 LYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNV 267 HSP 2 Score: 76.6406 bits (187), Expect = 1.735e-72 Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 2 Query: 581 ACHKGWGTSVIVGVAASGPEISPPPFPLVTGPVWKGTAFGGFKSPSQVPWLVNQYLK 751 + H+GWG SVI+GVA SG EIS PF LVTG VWKG+AFGG K SQ+P +V +K Sbjct: 276 SAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMK 332
BLAST of DY260143 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.735e-72 Identity = 104/182 (57.14%), Postives = 134/182 (73.63%), Query Frame = 3 Query: 9 LF*AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNV 554 L+ AEC EC+FC+SGKTNLC VR G G +M D +RFS NGQP+YH+MG STFS+YTVV +VS+AKI+P+A + VCLLGCGV TG+GAV NTAKV+PG VAVFGLG + R+I ID +PKKF+ A+ FG T+ +NP D+DKPI+ V++D+ G+D++FECIGNV Sbjct: 87 LYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNV 267 HSP 2 Score: 76.6406 bits (187), Expect = 1.735e-72 Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 2 Query: 581 ACHKGWGTSVIVGVAASGPEISPPPFPLVTGPVWKGTAFGGFKSPSQVPWLVNQYLK 751 + H+GWG SVI+GVA SG EIS PF LVTG VWKG+AFGG K SQ+P +V +K Sbjct: 276 SAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMK 332
BLAST of DY260143 vs. ExPASy Swiss-Prot
Match: FRMA_ECOSM (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmA PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.849e-72 Identity = 104/182 (57.14%), Postives = 133/182 (73.08%), Query Frame = 3 Query: 9 LF*AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNV 554 L+ AEC EC+FC+SGKTNLC VR G G +M D +RFS NGQP+YH+MG STFS+YTVV +VS+AKI+P+A + VCLLGCGV TG+GAV NTAKV+P VAVFGLG + R+I ID +PKKFD A+ FG T+ +NP D+DKPI+ V++D+ G+D++FECIGNV Sbjct: 87 LYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPDDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNV 267 HSP 2 Score: 76.6406 bits (187), Expect = 3.849e-72 Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 2 Query: 581 ACHKGWGTSVIVGVAASGPEISPPPFPLVTGPVWKGTAFGGFKSPSQVPWLVNQYLK 751 + H+GWG SVI+GVA SG EIS PF LVTG VWKG+AFGG K SQ+P +V +K Sbjct: 276 SAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMK 332
BLAST of DY260143 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 5.019e-72 Identity = 107/182 (58.79%), Postives = 132/182 (72.53%), Query Frame = 3 Query: 9 LF*AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNV 554 L+ AEC EC FC SGKTNLC VR G GVM D SRF +NGQP+YH+MG STFS+YTVV +VS+AKI+PQA ++VCLLGCGV TG+GAV NTAKV+ G VAVFGLG + R+ ID +P KF+ AK FG T+ +NP D+DKP+QQV+V++T GVD++FECIGNV Sbjct: 87 LYTAECGECDFCTSGKTNLCVAVRETQGKGVMP-DATSRFFVNGQPLYHYMGCSTFSEYTVVAEVSLAKINPQANAEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGGIGLAVVQGARQAKAGRIFAIDTNPSKFELAKQFGATDCINPNDYDKPVQQVLVEMTKWGVDHTFECIGNV 267 HSP 2 Score: 73.9442 bits (180), Expect = 5.019e-72 Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 2 Query: 581 ACHKGWGTSVIVGVAASGPEISPPPFPLVTGPVWKGTAFGGFKSPSQVPWLV 736 + H+GWG SVI+GVA +G EIS PF LVTG VWKGTAFGG K +Q+P +V Sbjct: 276 SAHRGWGQSVIIGVAGAGKEISTRPFQLVTGRVWKGTAFGGVKGRTQLPGMV 327
BLAST of DY260143 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.113e-71 Identity = 98/182 (53.85%), Postives = 129/182 (70.88%), Query Frame = 3 Query: 9 LF*AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNV 554 L+ +C ECKFC + KTNLC K+R G GVM D +RF+ G+ ++HFMG STFS++TVV ++S+AK++P+A LDKVCLLGCG+ TG GA NTA VE GS AV+GLG V +R+IGIDI+ KF+ K FG+TEFVNPK K +Q+V+ ++TD GVD++FECIGNV Sbjct: 94 LYVPQCYECKFCLNPKTNLCQKIRVTQGKGVMP-DGTTRFTCKGKEVFHFMGCSTFSEFTVVAEISIAKVNPKAALDKVCLLGCGISTGYGAALNTAAVEKGSNCAVWGLGAVGLAVAMGCKAAGAARIIGIDINESKFEIGKKFGITEFVNPKKFCKSVQKVLGEMTDVGVDFTFECIGNV 274 HSP 2 Score: 91.6633 bits (226), Expect = 1.113e-71 Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 2 Query: 581 ACHKGWGTSVIVGVAASGPEISPPPFPLVTGPVWKGTAFGGFKSPSQVPWLVNQYLKKE 757 +CHKGWGTSVIVGVAA G EIS PF LVTG VWKGTAFGGFKS VP LV+ Y+ K+ Sbjct: 283 SCHKGWGTSVIVGVAAHGEEISTRPFQLVTGRVWKGTAFGGFKSRDSVPKLVDDYMNKK 341
BLAST of DY260143 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL6 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6 GN=frmA PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 3.220e-71 Identity = 102/182 (56.04%), Postives = 132/182 (72.53%), Query Frame = 3 Query: 9 LF*AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNV 554 L+ C EC+FC+SGKTNLC VR G G +M D +RFS NGQP+YH+MG STFS+YTVV +VS+AKI+P+A + VCLLGCGV TG+GAV NTAKV+PG VAVFGLG + R+I ID +PKKF+ A+ FG T+ +NP D+DKPI+ V++D+ G+D++FECIGNV Sbjct: 87 LYTEXCGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNV 267 HSP 2 Score: 76.6406 bits (187), Expect = 3.220e-71 Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 2 Query: 581 ACHKGWGTSVIVGVAASGPEISPPPFPLVTGPVWKGTAFGGFKSPSQVPWLVNQYLK 751 + H+GWG SVI+GVA SG EIS PF LVTG VWKG+AFGG K SQ+P +V +K Sbjct: 276 SAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMK 332 The following BLAST results are available for this feature:
BLAST of DY260143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260143 ID=DY260143; Name=DY260143; organism=Citrus clementina; type=EST; length=1014bpback to top |