DY260144

Overview
NameDY260144
Unique NameDY260144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length910
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14652 contig Ccv1_Contig14652:1..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_HAEIN (Adenine phosphoribosyltransferase OS=Haemophilus influenzae GN=apt PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.512e-39
Identity = 53/88 (60.23%), Postives = 68/88 (77.27%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IP++PK GI+F+DITTLL    AF+ TIDL VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+
Sbjct:    8 IKSSIKSIPNYPKEGIIFRDITTLLEVPAAFKATIDLIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQ 95          

HSP 2 Score: 78.5666 bits (192), Expect = 1.512e-39
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G + L
Sbjct:   95 QSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVINLPELGGEKRL 164          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_HAEIG (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain PittGG) GN=apt PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.512e-39
Identity = 53/88 (60.23%), Postives = 68/88 (77.27%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IP++PK GI+F+DITTLL    AF+ TIDL VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+
Sbjct:    8 IKSSIKSIPNYPKEGIIFRDITTLLEVPAAFKATIDLIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQ 95          

HSP 2 Score: 78.5666 bits (192), Expect = 1.512e-39
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G + L
Sbjct:   95 QSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVINLPELGGEKRL 164          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_HAEIE (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain PittEE) GN=apt PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.512e-39
Identity = 53/88 (60.23%), Postives = 68/88 (77.27%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IP++PK GI+F+DITTLL    AF+ TIDL VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+
Sbjct:    8 IKSSIKSIPNYPKEGIIFRDITTLLEVPAAFKATIDLIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQ 95          

HSP 2 Score: 78.5666 bits (192), Expect = 1.512e-39
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G + L
Sbjct:   95 QSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGTVKHAAFVINLPELGGEKRL 164          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_HAEI8 (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=apt PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.512e-39
Identity = 53/88 (60.23%), Postives = 68/88 (77.27%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IP++PK GI+F+DITTLL    AF+ TIDL VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+
Sbjct:    8 IKSSIKSIPNYPKEGIIFRDITTLLEVPAAFKATIDLIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQ 95          

HSP 2 Score: 78.5666 bits (192), Expect = 1.512e-39
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G + L
Sbjct:   95 QSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVINLPELGGEKRL 164          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SHESH (Adenine phosphoribosyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=apt PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.564e-39
Identity = 50/97 (51.55%), Postives = 71/97 (73.20%), Query Frame = 1
Query:   73 VKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +   +  +A I  +I+ IPD+PKPGI+F+D+T+LL D  A++ T+D+ VE+YKD+  + V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:    2 ISMNNDTLAVIKQSIKTIPDYPKPGILFRDVTSLLEDHTAYKATMDILVEKYKDQGFTKVVGTEARGFLFGAPLALELGLGFVPVRKPGKLPRETIS 98          

HSP 2 Score: 73.9442 bits (180), Expect = 2.564e-39
Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG DV+E+HV A+   ++ L++DDL+ATGGT+ A ++L+  +G  V   A VI LP+L G + L
Sbjct:   99 ESYELEYGHDVLEIHVDAINENDKVLVIDDLLATGGTIEATVKLIRNLGGKVNHAAFVISLPDLGGEKRL 168          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SHEAM (Adenine phosphoribosyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=apt PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.342e-39
Identity = 49/90 (54.44%), Postives = 65/90 (72.22%), Query Frame = 1
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +A I  +I+ IPD+PK GIMF+D+T+LL D  A++  + L VERYKD   + V G E+RGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:    6 LALIKQSIKTIPDYPKAGIMFRDVTSLLEDHTAYQTAMKLLVERYKDSGFTKVVGTESRGFLFGAPLALELGVGFVPVRKPGKLPRETIS 95          

HSP 2 Score: 80.1073 bits (196), Expect = 3.342e-39
Identity = 35/70 (50.00%), Postives = 51/70 (72.86%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+HV A++AG++ L++DDL+ATGGT+ A ++L+ R+G  V   A VI LP+L G + L
Sbjct:   96 ESYELEYGHDTLEIHVDAIKAGDKVLVIDDLLATGGTIEATVKLIRRLGGDVAHAAFVISLPDLGGEKRL 165          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_ENTS8 (Adenine phosphoribosyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=apt PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.674e-39
Identity = 49/87 (56.32%), Postives = 69/87 (79.31%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+ALA+G  FVP+RKP+KLP E I+
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIA 97          

HSP 2 Score: 75.8702 bits (185), Expect = 5.674e-39
Identity = 33/73 (45.21%), Postives = 52/73 (71.23%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L ++ G E L ++
Sbjct:   98 ESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDIGGEERLNKQ 170          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SHEWM (Adenine phosphoribosyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.674e-39
Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 1
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +A I  +I+ IPD+PKPGI+F+D+T+LL D  A++ T+D+ V+ YKD   + + G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:    6 LAIIKQSIKTIPDYPKPGILFRDVTSLLEDHTAYKATMDILVQHYKDHGFTKIVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRETIS 95          

HSP 2 Score: 76.2554 bits (186), Expect = 5.674e-39
Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPL 589
            E Y LEYG DV+E+H  A+   ++ L+VDDL+ATGGT+ A ++L+ ++G  V   A VI LP+L G + L E  L
Sbjct:   96 ESYELEYGHDVLELHTDAINENDKVLVVDDLLATGGTIEATVKLIRKLGGEVKHAAFVISLPDLGGAKRLEEMDL 170          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT1_WHEAT (Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.637e-39
Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = 1
Query:   79 AQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISRRVFL 378
            A D R+  I+S+IR IP+FPKPGI+FQDITTLLLD +AFRDT DLFVERYKDK+I+VVAG+EARGFIFGPPIALAIGAKFVP+RKPKKLPGEVIS    L
Sbjct:    2 ASDGRVERIASSIRAIPNFPKPGILFQDITTLLLDPQAFRDTTDLFVERYKDKDITVVAGVEARGFIFGPPIALAIGAKFVPIRKPKKLPGEVISEEYSL 101          

HSP 2 Score: 123.635 bits (309), Expect = 1.528e-27
Identity = 60/84 (71.43%), Postives = 69/84 (82.14%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVPV 601
            G +  EEYSLEYG D +EMHVGAVQ  +R LIVDDL+ATGGTL AA +L+ERVG  VVECACVIELPELKGR+ LG+ P+FV V
Sbjct:   92 GEVISEEYSLEYGTDKIEMHVGAVQPNDRVLIVDDLIATGGTLCAAAKLIERVGAKVVECACVIELPELKGRDKLGDMPVFVLV 175          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_YERPY (Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=apt PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.623e-39
Identity = 51/101 (50.50%), Postives = 71/101 (70.30%), Query Frame = 1
Query:   61 ASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            ASA   AQ  ++  I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I+L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E IS
Sbjct:    3 ASASKTAQ--QLKYIKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIELLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETIS 101          

HSP 2 Score: 79.7221 bits (195), Expect = 9.623e-39
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            E Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G   L ++
Sbjct:  102 ESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
The following BLAST results are available for this feature:
BLAST of DY260144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_HAEIN1.512e-3960.23Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_HAEIG1.512e-3960.23Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_HAEIE1.512e-3960.23Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_HAEI81.512e-3960.23Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_SHESH2.564e-3951.55Adenine phosphoribosyltransferase OS=Shewanella se... [more]
APT_SHEAM3.342e-3954.44Adenine phosphoribosyltransferase OS=Shewanella am... [more]
APT_ENTS85.674e-3956.32Adenine phosphoribosyltransferase OS=Enterobacter ... [more]
APT_SHEWM5.674e-3953.33Adenine phosphoribosyltransferase OS=Shewanella wo... [more]
APT1_WHEAT8.637e-3979.00Adenine phosphoribosyltransferase 1 OS=Triticum ae... [more]
APT_YERPY9.623e-3950.50Adenine phosphoribosyltransferase OS=Yersinia pseu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260144 ID=DY260144; Name=DY260144; organism=Citrus clementina; type=EST; length=910bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
AAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCA
TATGGGTTTCCAGTCCCTCGGGCTCTGCCCCAAGCTTGAGAACCTCCTAA
AACCCCCCGGGAATAAAAGAGCCGTTTCATTGGCTTTTTTATTTTCATTT
AAGACCTTGGGGAAAGAGTGGTGGGGGAGCCGGGTTCCGTCCGCTTTTGG
TGGGGTTAAAAATGACAGGCTCATCAAAAAAATTCCCCCTTCCCCGGAAA
ACGCTGTATTTGAGGCCTTCCAAATTTCCTGGGAAATCCCTCTTGAACGG
TCTGTGAAGA
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