DY260144

Overview
NameDY260144
Unique NameDY260144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length910
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_NITEC (Adenine phosphoribosyltransferase OS=Nitrosomonas eutropha (strain C91) GN=apt PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.469e-36
Identity = 51/87 (58.62%), Postives = 60/87 (68.97%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I S IR IP +P+ GIMF+DITTLL D    R TID   ERY+ + I  V GIE+RGFIF  P+A A+GA FVP+RK  KLP E IS
Sbjct:    3 IKSRIRTIPHYPREGIMFRDITTLLKDPVGLRITIDEIAERYRAEKIDKVVGIESRGFIFAAPVAYALGAGFVPIRKQGKLPAETIS 89          

HSP 2 Score: 74.7146 bits (182), Expect = 1.469e-36
Identity = 34/77 (44.16%), Postives = 54/77 (70.13%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK--PLF 592
            +Y LEYG D +E+H  A+   +R L++DDL+ATGGT+ AAI+L++ +G  ++EC  VI+LP + G   L ++  PL+
Sbjct:   91 DYQLEYGYDKIEIHADAIDKDDRVLMIDDLIATGGTMEAAIKLVQEMGGKIIECCFVIDLPGVGGSTRLRQQDHPLY 167          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_AZOC5 (Adenine phosphoribosyltransferase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=apt PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.911e-36
Identity = 45/86 (52.33%), Postives = 61/86 (70.93%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            ++S +R IPD+PKPG+MF+DITTLL + +AFR T+D  V+ +    I  VAGIEARGFI G  +A  + A FVP+RK  KLP + +
Sbjct:    7 LASVVRTIPDYPKPGVMFRDITTLLGNPQAFRRTVDELVQPWAGAKIDKVAGIEARGFIVGGAVAHQLSAGFVPIRKKGKLPHQTV 92          

HSP 2 Score: 81.6481 bits (200), Expect = 1.911e-36
Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVPV 601
            Y+LEYG+D MEMHV AV  GER ++VDDL+ATGGT   A++LL ++G  V     +++LP+L G E L  + + VPV
Sbjct:   96 YALEYGQDEMEMHVDAVHPGERVILVDDLIATGGTAEGAVKLLRQIGAQVEAACFIVDLPDLGGAEKL--RAMGVPV 170          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_DINSH (Adenine phosphoribosyltransferase OS=Dinoroseobacter shibae (strain DFL 12) GN=apt PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.911e-36
Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            IR IPDFP  GIMF+D+TTL  D + FR  +D  ++ + D  I  VAG+EARGFI G  +A  +   FVP+RK  KLPG+ I++
Sbjct:   11 IRTIPDFPHEGIMFRDVTTLFADPRGFRIAVDQLLDPFVDVKIDKVAGLEARGFILGGAVAHQLSVGFVPIRKKGKLPGKTIAQ 94          

HSP 2 Score: 86.6557 bits (213), Expect = 1.911e-36
Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFV 595
            G+   ++Y LEYGK  +E+H  A Q GER L+VDDL+ATGGT  A I+L+ER+G  VV CA +I+LP+L GR+ L E  + V
Sbjct:   89 GKTIAQDYVLEYGKATVEIHDDAFQPGERVLLVDDLLATGGTARAGIQLIERLGAEVVGCAFLIDLPDLGGRKLLEEMDMGV 170          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_DESOH (Adenine phosphoribosyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=apt PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.913e-36
Identity = 41/74 (55.41%), Postives = 58/74 (78.38%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLF 592
            YSLEYG+ ++E+H  A+  GER ++VDDL+ATGGT+ A I L+E++G  VVECA VI+LP+LKGRE + +  +F
Sbjct:   92 YSLEYGESMVEIHEDAILKGERVVVVDDLIATGGTVKATIDLVEKLGGEVVECAFVIDLPDLKGREKIRDYKMF 165          

HSP 2 Score: 85.1149 bits (209), Expect = 1.913e-36
Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            + + IR +P++P  G+MF+DITTLL D  AF++ I+ F +RY+   I  + GI+ARG IFG P+A  +   FVP+RK  K+P   I
Sbjct:    3 LKATIRTLPNWPIEGVMFRDITTLLQDPAAFKEAINRFYDRYRTMKIDKIVGIDARGLIFGAPLAYKLEVGFVPVRKKGKIPFRTI 88          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_BORA1 (Adenine phosphoribosyltransferase OS=Bordetella avium (strain 197N) GN=apt PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.488e-36
Identity = 41/76 (53.95%), Postives = 57/76 (75.00%), Query Frame = 2
Query:  353 RLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            R   EEYSLEYG   +E+H  AV+ G+R L+VDDL+ATGGT+ AAI+LL+R+G +VVE A +I+LP + G + + E
Sbjct:   92 RTVAEEYSLEYGNATVEIHTDAVRTGQRVLLVDDLIATGGTMVAAIKLLQRLGANVVEAAAIIDLPYIGGSQHIAE 167          

HSP 2 Score: 85.8853 bits (211), Expect = 2.488e-36
Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISRRVFL 378
            +   IR +PD+P PG+ F+DIT +L D + FR  +DLFV RY  + + +VAG++ARGFI G  +A  +   FVP+RK  KLP   ++    L
Sbjct:    9 VRRTIRSVPDWPVPGVTFRDITPVLQDPRTFRALVDLFVYRYMRQRLDLVAGVDARGFILGSVLAYELNLGFVPVRKKGKLPYRTVAEEYSL 100          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_CLOB8 (Adenine phosphoribosyltransferase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=apt PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.492e-36
Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +   IRVI +FPK GI F+DITTL+ D +A R+TI+  V+  +DK I ++ G EARGFIFG P+A A+G  F+P+RKP KLPGE IS
Sbjct:    3 LQEKIRVIENFPKEGISFKDITTLIADGEALRETINRIVKHLEDKKIDLIVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGETIS 89          

HSP 2 Score: 70.8626 bits (172), Expect = 2.492e-36
Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            G      Y LEYG+D +++H  A++ G+R  +VDDL+ATGGT+    +L+E+ G  V     VIEL ELKG++ L
Sbjct:   85 GETISVNYGLEYGEDQLQLHKDAIKPGQRVAVVDDLLATGGTVEGVAKLIEQAGGIVASLDFVIELTELKGKDKL 159          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_CHLAA (Adenine phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=apt PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.492e-36
Identity = 45/82 (54.88%), Postives = 59/82 (71.95%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            ++S IR IPDFP PGI F+DITTL+ + +AF + ID   ERY+++ I  V GIE+RGFIF  P+A  +G   VP+RKP KLP
Sbjct:    6 LASLIRNIPDFPIPGIQFKDITTLIGNGQAFSEVIDRLHERYQNQQIDAVVGIESRGFIFSAPLAYRLGVGLVPIRKPGKLP 87          

HSP 2 Score: 80.8777 bits (198), Expect = 2.492e-36
Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLF 592
            EY LEYG + +E+H  A Q G R L++DDL+ATGGT++AA  L+E  G  V E A VIEL  L GRE L E+P+F
Sbjct:   94 EYQLEYGTNRLEIHRDAFQPGARVLVIDDLLATGGTIAAACDLIEMAGGQVAELAFVIELTFLNGRERLRERPVF 168          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SHEDO (Adenine phosphoribosyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=apt PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.240e-36
Identity = 48/91 (52.75%), Postives = 67/91 (73.63%), Query Frame = 1
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            +A I  +I+ I D+PKPGIMF+D+T+LL D  A++ TI LFVE+Y+    + V G EARGF+FG P+AL +G  FVP+RKP KLP + I++
Sbjct:   10 LALIKQSIKTIADYPKPGIMFRDVTSLLEDASAYQATIALFVEKYQGMGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRKTIAQ 100          

HSP 2 Score: 71.633 bits (174), Expect = 3.240e-36
Identity = 31/70 (44.29%), Postives = 49/70 (70.00%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG D +E+HV A++  ++ L+VDDL+ATGGT+ A ++L+ ++G  V   A VI LP++ G + L
Sbjct:  100 QSYELEYGMDTLEIHVDAIKPEDKVLVVDDLLATGGTIEATVKLIRQLGGQVEHAAFVISLPDIGGEKRL 169          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_PECCP (Adenine phosphoribosyltransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=apt PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.240e-36
Identity = 45/87 (51.72%), Postives = 65/87 (74.71%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I ++I+ IPD+PKPGI+F+D+T+LL D  A+  +I++   RY++  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP   IS
Sbjct:   13 IKNSIKSIPDYPKPGILFRDVTSLLEDPVAYAASIEMLANRYRNSGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRPTIS 99          

HSP 2 Score: 72.7886 bits (177), Expect = 3.240e-36
Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+H  A+ AG+  L++DDL+ATGGTL A ++L+ R+G  V + A +I L +L G + L
Sbjct:  100 ESYELEYGSDTLEIHSDAISAGDNVLVIDDLLATGGTLEATVKLIRRLGGTVNDAAFIINLFDLGGEQRL 169          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_ACIBL (Adenine phosphoribosyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=apt PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.242e-36
Identity = 45/86 (52.33%), Postives = 62/86 (72.09%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            + + +R IPD+PKPGI+F DITTL+ +      TID   E + +KNI +V G+EARGFIFGP +A  + A F+P+RKP+KLPGE +
Sbjct:   13 LKAYVREIPDYPKPGILFYDITTLIKEPVGLARTIDGITEHFLNKNIDLVVGMEARGFIFGPAVAYRLNAGFIPIRKPRKLPGETV 98          

HSP 2 Score: 72.7886 bits (177), Expect = 3.242e-36
Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 2
Query:  338 RSFLGRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLF 592
            R   G      Y LEYG+D +E+H  A+Q  +R L+VDDL+ATGGT  AA  L++++G  +   A VIEL  L GRE L +  ++
Sbjct:   91 RKLPGETVKHTYKLEYGEDTLEIHKDAIQKAQRVLVVDDLLATGGTAVAATELVKQLGGEICGIAFVIELDFLNGRERLKDYDVY 175          
The following BLAST results are available for this feature:
BLAST of DY260144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_NITEC1.469e-3658.62Adenine phosphoribosyltransferase OS=Nitrosomonas ... [more]
APT_AZOC51.911e-3652.33Adenine phosphoribosyltransferase OS=Azorhizobium ... [more]
APT_DINSH1.911e-3650.00Adenine phosphoribosyltransferase OS=Dinoroseobact... [more]
APT_DESOH1.913e-3655.41Adenine phosphoribosyltransferase OS=Desulfococcus... [more]
APT_BORA12.488e-3653.95Adenine phosphoribosyltransferase OS=Bordetella av... [more]
APT_CLOB82.492e-3656.32Adenine phosphoribosyltransferase OS=Clostridium b... [more]
APT_CHLAA2.492e-3654.88Adenine phosphoribosyltransferase OS=Chloroflexus ... [more]
APT_SHEDO3.240e-3652.75Adenine phosphoribosyltransferase OS=Shewanella de... [more]
APT_PECCP3.240e-3651.72Adenine phosphoribosyltransferase OS=Pectobacteriu... [more]
APT_ACIBL3.242e-3652.33Adenine phosphoribosyltransferase OS=Acidobacteria... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260144 ID=DY260144; Name=DY260144; organism=Citrus clementina; type=EST; length=910bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
AAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCA
TATGGGTTTCCAGTCCCTCGGGCTCTGCCCCAAGCTTGAGAACCTCCTAA
AACCCCCCGGGAATAAAAGAGCCGTTTCATTGGCTTTTTTATTTTCATTT
AAGACCTTGGGGAAAGAGTGGTGGGGGAGCCGGGTTCCGTCCGCTTTTGG
TGGGGTTAAAAATGACAGGCTCATCAAAAAAATTCCCCCTTCCCCGGAAA
ACGCTGTATTTGAGGCCTTCCAAATTTCCTGGGAAATCCCTCTTGAACGG
TCTGTGAAGA
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