DY260144

Overview
NameDY260144
Unique NameDY260144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length910
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_RHOPB (Adenine phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=apt PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.213e-36
Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 1
Query:   58 MASADVKAQDPRIA-GISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            M+ A VK     IA  + +++R IPD+PKPGI+F+DITTLL D ++FR  ID  V+ +    I  VAGIEARGFI G  IA  + + FVP+RK  KLP   +S
Sbjct:   11 MSVAAVKDLTMTIAYDLKASVRTIPDYPKPGILFRDITTLLGDARSFRCAIDELVQPWAGSKIDKVAGIEARGFIIGGAIAHQVSSGFVPIRKKGKLPHTTVS 113          

HSP 2 Score: 81.2629 bits (199), Expect = 4.213e-36
Identity = 38/77 (49.35%), Postives = 54/77 (70.13%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVPV 601
            Y+LEYG D++EMHV A++ GER ++VDDL+ATGGT   AI+LL + G  +V    +I+LPEL G   +  + + VPV
Sbjct:  116 YALEYGSDIIEMHVDAIKPGERVILVDDLIATGGTAEGAIKLLRQTGAEIVAACFIIDLPELGGAAKI--RDMGVPV 190          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_CHRSD (Adenine phosphoribosyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=apt PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.223e-36
Identity = 45/87 (51.72%), Postives = 62/87 (71.26%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I S IR +PD+P+PG+ F+DIT +L ++ AFR  ID FV RY++ N+  +A I+ARGFI G P+A  +G  FVP+RK  KLP + IS
Sbjct:    8 IKSVIRTVPDWPQPGVNFRDITPVLQNSAAFRKLIDSFVHRYQELNLDAIAAIDARGFIIGAPVAYELGCSFVPVRKKGKLPFKTIS 94          

HSP 2 Score: 75.485 bits (184), Expect = 4.223e-36
Identity = 35/70 (50.00%), Postives = 50/70 (71.43%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y+LEYG   +E+H  A + G+R L++DDL+ATGGT+ AA  L++R G  VVE A +I+LPEL G + +
Sbjct:   95 ETYTLEYGASTVELHSDAFREGDRILVMDDLIATGGTMLAAASLIQRSGGQVVETATIIDLPELGGAQKI 164          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_OCHA4 (Adenine phosphoribosyltransferase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=apt PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.223e-36
Identity = 45/88 (51.14%), Postives = 59/88 (67.05%), Query Frame = 1
Query:   97 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            A +  AIR IPD+PKPG+ F+D+TTL+ D +AFR ++D  V  Y    +  VAGIEARGFI G  IA  + A FVP+RK  KLP + +
Sbjct:    7 ASLKDAIRTIPDYPKPGVQFRDVTTLMGDAQAFRRSVDELVYPYAGNKVDKVAGIEARGFILGGAIAHQLSAGFVPIRKKGKLPRDTV 94          

HSP 2 Score: 80.1073 bits (196), Expect = 4.223e-36
Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVPV 601
            YSLEYG D MEMH  A++ GER ++VDDL+ATGGT  AA +LL ++G  +V    +I+LP+L GR+ L  + L VPV
Sbjct:   98 YSLEYGIDEMEMHRDAIEKGERIILVDDLIATGGTAEAAAKLLLQMGAEIVAACFIIDLPDLGGRKKL--EALGVPV 172          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_PSEA6 (Adenine phosphoribosyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=apt PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.225e-36
Identity = 46/89 (51.69%), Postives = 66/89 (74.16%), Query Frame = 1
Query:   97 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            A I S I+ +PD+PKPGI+F+D+T++L D KA+  +I+L V+ +   N   VAG EARGF+FG P+A+ +G  F+P+RKP KLP +VIS
Sbjct:    4 AYIKSVIKTVPDYPKPGILFRDVTSILEDHKAYTTSIELLVKEFAPYNFDKVAGTEARGFLFGAPLAIELGIGFIPVRKPNKLPRKVIS 92          

HSP 2 Score: 70.8626 bits (172), Expect = 4.225e-36
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 2
Query:  353 RLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            ++  E Y LEYG D +E+H  AV+ GE+ L++DDL+ATGGT+ A   L+ R+G  V     VI LP+L G   L E
Sbjct:   89 KVISESYDLEYGTDCLEIHEDAVKPGEKVLMLDDLLATGGTMIATANLIRRLGGIVEHAGFVISLPDLGGEAKLQE 164          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_NITWN (Adenine phosphoribosyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=apt PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.225e-36
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            + +++R IPD+PKPG+MF+DITTLL D +AFR  +D  V  +    I  VAGIEARGFI G  +A  + A FVP+RK  KLP + +
Sbjct:    7 LQASVRTIPDYPKPGVMFRDITTLLGDARAFRRAVDQLVHPWAGSKIDKVAGIEARGFILGGAVAHQVSAGFVPIRKKGKLPHQTV 92          

HSP 2 Score: 80.1073 bits (196), Expect = 4.225e-36
Identity = 39/77 (50.65%), Postives = 53/77 (68.83%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVPV 601
            Y+LEYG D MEMHV A+  GER ++VDDL+ATGGT   A++LL ++G  VV    +I+LP+L G   L  + + VPV
Sbjct:   96 YALEYGTDEMEMHVDAIARGERVILVDDLIATGGTAEGAVKLLRQIGADVVAACFIIDLPDLGGAAKL--RAMDVPV 170          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_RHIL3 (Adenine phosphoribosyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=apt PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.504e-36
Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 1
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            I+ ++++IR IPD+PKPGI+F+DITTLL + +AFR  +D  V+ Y    I  +AG+EARGFI G  +A  + + FVP+RK  KLP E +
Sbjct:    5 ISELAASIRSIPDYPKPGIIFRDITTLLGNPRAFRRAVDELVQPYAGTKIDKIAGMEARGFILGGAVAHQLSSGFVPIRKKGKLPHETV 93          

HSP 2 Score: 82.0333 bits (201), Expect = 5.504e-36
Identity = 41/70 (58.57%), Postives = 49/70 (70.00%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            YSLEYG D MEMH  AVQ GE+ ++VDDL+ATGGT   A RLL ++G  VV    VI+LP+L GR  L E
Sbjct:   97 YSLEYGVDEMEMHRDAVQPGEKVILVDDLIATGGTAVGATRLLRQIGAEVVGACFVIDLPDLGGRRKLEE 166          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_CHLPB (Adenine phosphoribosyltransferase OS=Chlorobium phaeobacteroides (strain BS1) GN=apt PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.506e-36
Identity = 46/90 (51.11%), Postives = 60/90 (66.67%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S IR IPD+PK GIMF+DITTLL D   FR  ID   + Y +  +   ++ G+EARGFI G  ++  +G  FVP+RKP KLPGEV+ +
Sbjct:    3 IKSRIRTIPDYPKKGIMFRDITTLLKDPVGFRLVIDQLSQHYIENGVDFDMIVGMEARGFIIGGALSYTLGKGFVPIRKPGKLPGEVVDQ 92          

HSP 2 Score: 80.8777 bits (198), Expect = 5.506e-36
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            G +  +EY LEYG D +EMH+ A++ G R L+VDDL+ATGGT  A   L+E+VG  + E A ++ LP++ G++ L EK
Sbjct:   87 GEVVDQEYQLEYGTDKVEMHIDALEKGSRVLLVDDLLATGGTAMAGASLVEKVGGVIAEMAFIVNLPDIGGQKKLEEK 164          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SODGM (Adenine phosphoribosyltransferase OS=Sodalis glossinidius (strain morsitans) GN=apt PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 7.166e-36
Identity = 47/100 (47.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query:   79 AQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISRRVFL 378
            A + ++A I  +I+ +PD+PKPGI+F+D+T+LL +++A+  +I L  +R++D  ++ + G EARGF+FG P+ALA+G  FVP+RKP KLP E IS    L
Sbjct:    3 ATEQQLALIKQSIKSVPDYPKPGILFRDVTSLLENSRAYAASIALLADRFRDAGLTKIVGTEARGFLFGTPVALALGLGFVPVRKPGKLPRETISENYVL 102          

HSP 2 Score: 67.3958 bits (163), Expect = 7.166e-36
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 562
            E Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A VI L  L G
Sbjct:   98 ENYVLEYGTDGLEIHKDAIVPGDKVLVVDDLLATGGTICATVKLIRRLGGEVQDAAFVINLAYLGG 163          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SALG2 (Adenine phosphoribosyltransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=apt PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.166e-36
Identity = 47/87 (54.02%), Postives = 67/87 (77.01%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PK GI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+
Sbjct:   11 LKNSIKSIQDYPKLGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIA 97          

HSP 2 Score: 70.8626 bits (172), Expect = 7.166e-36
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEY  D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L
Sbjct:   98 ETYELEYSTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SILST (Adenine phosphoribosyltransferase OS=Silicibacter sp. (strain TM1040) GN=apt PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 7.169e-36
Identity = 38/75 (50.67%), Postives = 56/75 (74.67%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            G    +EY LEYG+ V+E+H  A+Q GE+ L+VDDL+ATGGT  A I+L+E++G  ++ C+ +I+LPEL GR+ L
Sbjct:   89 GATISQEYKLEYGEAVVELHKDAIQPGEKILVVDDLLATGGTAGAGIKLIEKLGGEIISCSFIIDLPELGGRKHL 163          

HSP 2 Score: 86.2705 bits (212), Expect = 7.169e-36
Identity = 43/88 (48.86%), Postives = 54/88 (61.36%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            +   IR I DFP  GIMF+D+TTL  D + FR  +D  +  Y  + I  V G+EARGFI G  IA  +G  FVP+RK  KLPG  IS+
Sbjct:    7 VKDYIRTIVDFPHEGIMFRDVTTLFADPRGFRMAVDQMLHPYAGQRIDKVVGLEARGFILGGAIAHQLGTGFVPVRKKGKLPGATISQ 94          
The following BLAST results are available for this feature:
BLAST of DY260144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_RHOPB4.213e-3649.51Adenine phosphoribosyltransferase OS=Rhodopseudomo... [more]
APT_CHRSD4.223e-3651.72Adenine phosphoribosyltransferase OS=Chromohalobac... [more]
APT_OCHA44.223e-3651.14Adenine phosphoribosyltransferase OS=Ochrobactrum ... [more]
APT_PSEA64.225e-3651.69Adenine phosphoribosyltransferase OS=Pseudoalterom... [more]
APT_NITWN4.225e-3651.16Adenine phosphoribosyltransferase OS=Nitrobacter w... [more]
APT_RHIL35.504e-3649.44Adenine phosphoribosyltransferase OS=Rhizobium leg... [more]
APT_CHLPB5.506e-3651.11Adenine phosphoribosyltransferase OS=Chlorobium ph... [more]
APT_SODGM7.166e-3647.00Adenine phosphoribosyltransferase OS=Sodalis gloss... [more]
APT_SALG27.166e-3654.02Adenine phosphoribosyltransferase OS=Salmonella ga... [more]
APT_SILST7.169e-3650.67Adenine phosphoribosyltransferase OS=Silicibacter ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260144 ID=DY260144; Name=DY260144; organism=Citrus clementina; type=EST; length=910bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
AAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCA
TATGGGTTTCCAGTCCCTCGGGCTCTGCCCCAAGCTTGAGAACCTCCTAA
AACCCCCCGGGAATAAAAGAGCCGTTTCATTGGCTTTTTTATTTTCATTT
AAGACCTTGGGGAAAGAGTGGTGGGGGAGCCGGGTTCCGTCCGCTTTTGG
TGGGGTTAAAAATGACAGGCTCATCAAAAAAATTCCCCCTTCCCCGGAAA
ACGCTGTATTTGAGGCCTTCCAAATTTCCTGGGAAATCCCTCTTGAACGG
TCTGTGAAGA
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