DY260144

Overview
NameDY260144
Unique NameDY260144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length910
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_NITMU (Adenine phosphoribosyltransferase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=apt PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 7.173e-36
Identity = 47/88 (53.41%), Postives = 53/88 (60.23%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S IR I  +P  GIMF+DITTLL D    R TI     RYK   I  VAGIE+RGFI G P+A  +G  FVP+RK  KLP E   R
Sbjct:    3 IKSRIRTIAHYPHEGIMFRDITTLLKDPVGLRATIQEIASRYKSMKIDKVAGIESRGFIIGAPVAYELGVGFVPVRKKGKLPAETRGR 90          

HSP 2 Score: 83.5741 bits (205), Expect = 7.173e-36
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFV 595
            +Y LEYG D +E+HV A+Q G+R L+VDDL+ATGGT  AA  L+  +G  VVEC+ VI+LP++ GR  L ++ L V
Sbjct:   91 DYQLEYGSDRIEIHVDAIQKGDRVLLVDDLIATGGTAEAAAGLIHEMGGEVVECSFVIDLPDIGGRARLEDQGLKV 166          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_MARMM (Adenine phosphoribosyltransferase OS=Maricaulis maris (strain MCS10) GN=apt PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.173e-36
Identity = 43/82 (52.44%), Postives = 55/82 (67.07%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            + SAIR IPD+P+PGI F+D+TTL+ D +AFR  ID  V+ +    I  VAG EARGFI G  +A  +   FVP+RK  KLP
Sbjct:    3 LKSAIRTIPDYPEPGIQFRDVTTLIGDARAFRVAIDRMVQPWAGAKIDKVAGTEARGFILGGAVAHQLSVGFVPVRKRGKLP 84          

HSP 2 Score: 85.8853 bits (211), Expect = 7.173e-36
Identity = 43/84 (51.19%), Postives = 59/84 (70.24%), Query Frame = 2
Query:  353 RLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVPVS 604
            R   E+Y LEYG+D +E+HV A+  G+R L+VDDL+ATGGT  A+I+LL+R G  VV    +I+LPEL G E +  + + VPVS
Sbjct:   86 RTLREDYELEYGQDTIEIHVDAIAEGDRVLLVDDLIATGGTAEASIKLLQRAGATVVGATFIIDLPELGGAERI--EAMGVPVS 167          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_CYAP4 (Adenine phosphoribosyltransferase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=apt PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.181e-36
Identity = 48/85 (56.47%), Postives = 61/85 (71.76%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEV 357
            + S IR +PDFPKPGI+F+DITTLL + +  R TID   + + D+ I  VAGIE+RGFIFG P+A  +GA FVP+RK  KL  EV
Sbjct:    3 LKSLIREVPDFPKPGILFRDITTLLQNEQGLRYTIDRLTQAFSDQAIDYVAGIESRGFIFGAPLAYKLGAGFVPIRKAGKLCAEV 87          

HSP 2 Score: 74.7146 bits (182), Expect = 7.181e-36
Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVPV 601
            EY+LEYG D +E+H  A+  G R LIVDDL+ATGGT +AA +L+   G  +V  A +IEL +L GR+ L + P+ V V
Sbjct:   91 EYALEYGTDRLEIHKDAIHTGGRVLIVDDLIATGGTAAAAAQLITLCGGDLVSYAFIIELQDLGGRKNLPDVPIKVLV 168          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_BORPA (Adenine phosphoribosyltransferase OS=Bordetella parapertussis GN=apt PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.323e-36
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 2
Query:  353 RLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 562
            R   EEYSLEYG   +EMH  +V+ G+R L+VDDL+ATGGT+ AAI+LL+R+G +VVE A +I+LP L G
Sbjct:  101 RTVAEEYSLEYGNAAVEMHTDSVRTGQRVLLVDDLIATGGTMLAAIKLLQRLGANVVEAAAIIDLPYLGG 170          

HSP 2 Score: 85.1149 bits (209), Expect = 9.323e-36
Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISRRVFL 378
            +   IR +PD+P PG+ F+DIT +L D + FR  IDLFV RY  + + +VAG++ARGFI G  +A  +   FVP+RK  KLP   ++    L
Sbjct:   18 VRRTIRSVPDWPTPGVTFRDITPVLQDPRTFRVLIDLFVYRYMRQRLDLVAGVDARGFIVGAVLAHELNLGFVPVRKKGKLPYRTVAEEYSL 109          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_BORBR (Adenine phosphoribosyltransferase OS=Bordetella bronchiseptica GN=apt PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.323e-36
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 2
Query:  353 RLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 562
            R   EEYSLEYG   +EMH  +V+ G+R L+VDDL+ATGGT+ AAI+LL+R+G +VVE A +I+LP L G
Sbjct:  101 RTVAEEYSLEYGNAAVEMHTDSVRTGQRVLLVDDLIATGGTMLAAIKLLQRLGANVVEAAAIIDLPYLGG 170          

HSP 2 Score: 85.1149 bits (209), Expect = 9.323e-36
Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISRRVFL 378
            +   IR +PD+P PG+ F+DIT +L D + FR  IDLFV RY  + + +VAG++ARGFI G  +A  +   FVP+RK  KLP   ++    L
Sbjct:   18 VRRTIRSVPDWPTPGVTFRDITPVLQDPRTFRVLIDLFVYRYMRQRLDLVAGVDARGFIVGAVLAHELNLGFVPVRKKGKLPYRTVAEEYSL 109          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_BURM1 (Adenine phosphoribosyltransferase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=apt PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 9.326e-36
Identity = 49/88 (55.68%), Postives = 62/88 (70.45%), Query Frame = 1
Query:   85 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            DP +A I S IR +PD+P+PG+MF+DITTLL   KA R  +DLFVERY D  +  VAG++ARGFI  P +A  +   FVP+RK  KLP
Sbjct:   11 DP-VAFIHSQIRTVPDWPQPGVMFRDITTLLQSPKALRILVDLFVERYVDAKLDYVAGLDARGFIIAPIVAYELSVGFVPIRKVGKLP 97          

HSP 2 Score: 73.9442 bits (180), Expect = 9.326e-36
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 562
            E Y LEYG   +E+H  A + G+R +I+DDL+ATGGT+ A   LLER+G  VVE A +I+LP+L G
Sbjct:  103 ESYELEYGSATVEIHEDACKPGDRVIIMDDLIATGGTMMAGRNLLERLGAVVVEGAAIIDLPDLGG 168          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_BURP6 (Adenine phosphoribosyltransferase OS=Burkholderia pseudomallei (strain 668) GN=apt PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 9.326e-36
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 1
Query:   58 MASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            M S      DP +  I S IR +PD+P+PG+MF+DIT LL   KA R  +DLFVERY D N+  +AG++ARGFI  P +A  +   FVP+RK  KLP
Sbjct:    1 MMSTSDAPLDP-VEFIHSRIRTVPDWPQPGVMFRDITPLLQSAKALRVLVDLFVERYVDANLDYIAGLDARGFIIAPIVAYELSVGFVPIRKVGKLP 96          

HSP 2 Score: 75.485 bits (184), Expect = 9.326e-36
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPL 589
            E Y+LEYG   +E+H  A + G+R +IVDDL+ATGGT+ A   LLER+G  VVE A +++LP+L G   L E  L
Sbjct:  102 ESYALEYGTATVEIHEDACKPGDRVVIVDDLIATGGTMMAGKNLLERLGAVVVEGAAIVDLPDLGGSALLREAGL 176          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_ALISL (Adenine phosphoribosyltransferase OS=Aliivibrio salmonicida (strain LFI1238) GN=apt PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.335e-36
Identity = 45/88 (51.14%), Postives = 65/88 (73.86%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I ++I+ +PD+PK GIMF+D+T+L+ D KA++ TI L VE+YK    + + G EARGF+FG P+AL +G  FVP+RKP KLP   I++
Sbjct:    9 IKNSIKSVPDYPKAGIMFRDVTSLMEDPKAYQATIQLLVEKYKQGGFTKIVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRPTIAQ 96          

HSP 2 Score: 71.633 bits (174), Expect = 9.335e-36
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A ++L+ ++G  V   A VI LPE+ G   L
Sbjct:   96 QTYDLEYGTDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATVKLIRQLGGDVQHAAFVINLPEIGGETRL 165          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SHESM (Adenine phosphoribosyltransferase OS=Shewanella sp. (strain MR-4) GN=apt PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.335e-36
Identity = 45/88 (51.14%), Postives = 66/88 (75.00%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I  +I+ IP++PK GI+F+D+T+LL +  A++ TIDL VE+Y++K  + + G EARGF+FG P+AL +G  FVP+RKP KLP   IS+
Sbjct:   11 IKQSIKTIPNYPKEGILFRDVTSLLENAAAYKATIDLLVEQYRNKGFTKIVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRATISQ 98          

HSP 2 Score: 72.0182 bits (175), Expect = 9.335e-36
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG D +E+H  A+ A ++ L+VDDL+ATGGT+ A ++L+ ++G  V + A VI LP+L G   L
Sbjct:   98 QSYELEYGHDSLEIHTDAITANDKVLVVDDLLATGGTIEATVKLIRQLGGEVQDAAFVISLPDLGGEARL 167          
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SHESA (Adenine phosphoribosyltransferase OS=Shewanella sp. (strain ANA-3) GN=apt PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.335e-36
Identity = 45/88 (51.14%), Postives = 66/88 (75.00%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I  +I+ IP++PK GI+F+D+T+LL +  A++ TIDL VE+Y++K  + + G EARGF+FG P+AL +G  FVP+RKP KLP   IS+
Sbjct:   11 IKQSIKTIPNYPKEGILFRDVTSLLENAAAYKATIDLLVEQYRNKGFTKIVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRATISQ 98          

HSP 2 Score: 72.0182 bits (175), Expect = 9.335e-36
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG D +E+H  A+ A ++ L+VDDL+ATGGT+ A ++L+ ++G  V + A VI LP+L G   L
Sbjct:   98 QSYELEYGHDSLEIHTDAITANDKVLVVDDLLATGGTIEATVKLIRQLGGEVQDAAFVISLPDLGGEARL 167          
The following BLAST results are available for this feature:
BLAST of DY260144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_NITMU7.173e-3653.41Adenine phosphoribosyltransferase OS=Nitrosospira ... [more]
APT_MARMM7.173e-3652.44Adenine phosphoribosyltransferase OS=Maricaulis ma... [more]
APT_CYAP47.181e-3656.47Adenine phosphoribosyltransferase OS=Cyanothece sp... [more]
APT_BORPA9.323e-3658.57Adenine phosphoribosyltransferase OS=Bordetella pa... [more]
APT_BORBR9.323e-3658.57Adenine phosphoribosyltransferase OS=Bordetella br... [more]
APT_BURM19.326e-3655.68Adenine phosphoribosyltransferase OS=Burkholderia ... [more]
APT_BURP69.326e-3650.52Adenine phosphoribosyltransferase OS=Burkholderia ... [more]
APT_ALISL9.335e-3651.14Adenine phosphoribosyltransferase OS=Aliivibrio sa... [more]
APT_SHESM9.335e-3651.14Adenine phosphoribosyltransferase OS=Shewanella sp... [more]
APT_SHESA9.335e-3651.14Adenine phosphoribosyltransferase OS=Shewanella sp... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260144 ID=DY260144; Name=DY260144; organism=Citrus clementina; type=EST; length=910bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
AAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCA
TATGGGTTTCCAGTCCCTCGGGCTCTGCCCCAAGCTTGAGAACCTCCTAA
AACCCCCCGGGAATAAAAGAGCCGTTTCATTGGCTTTTTTATTTTCATTT
AAGACCTTGGGGAAAGAGTGGTGGGGGAGCCGGGTTCCGTCCGCTTTTGG
TGGGGTTAAAAATGACAGGCTCATCAAAAAAATTCCCCCTTCCCCGGAAA
ACGCTGTATTTGAGGCCTTCCAAATTTCCTGGGAAATCCCTCTTGAACGG
TCTGTGAAGA
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