DY260144

Overview
NameDY260144
Unique NameDY260144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length910
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14652 contig Ccv1_Contig14652:1..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_ECO55 (Adenine phosphoribosyltransferase OS=Escherichia coli (strain 55989 / EAEC) GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.130e-38
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97

HSP 2 Score: 74.3294 bits (181), Expect = 2.130e-38
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L
Sbjct:   98 ETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_ECO45 (Adenine phosphoribosyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.130e-38
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97

HSP 2 Score: 74.3294 bits (181), Expect = 2.130e-38
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L
Sbjct:   98 ETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_ECO27 (Adenine phosphoribosyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.130e-38
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97

HSP 2 Score: 74.3294 bits (181), Expect = 2.130e-38
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L
Sbjct:   98 ETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_ECO24 (Adenine phosphoribosyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.130e-38
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97

HSP 2 Score: 74.3294 bits (181), Expect = 2.130e-38
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L
Sbjct:   98 ETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_MANSM (Adenine phosphoribosyltransferase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=apt PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.131e-38
Identity = 48/88 (54.55%), Postives = 67/88 (76.14%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IP+ PK GI+F+DIT+L+   +AF+ T+DL V  YK++ I+ V G E+RGFIFG P+ALA+G  FV +RKP+KLP E IS+
Sbjct:    8 IKSSIKSIPNHPKEGIIFRDITSLIEVPEAFQATVDLIVGNYKNQGITKVVGTESRGFIFGAPVALALGLPFVLVRKPRKLPRETISQ 95

HSP 2 Score: 82.4185 bits (202), Expect = 2.131e-38
Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG+D +EMHV +V+AG+  LI+DDL+ATGGT+ A I+L++R+G  V   A VI LPEL G E L
Sbjct:   95 QSYQLEYGEDTLEMHVDSVKAGDNVLIIDDLLATGGTVDATIKLIKRLGGDVKHAAFVINLPELGGEERL 164
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_YERPS (Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis GN=apt PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.773e-38
Identity = 46/87 (52.87%), Postives = 64/87 (73.56%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I+L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E IS
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIELLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETIS 101

HSP 2 Score: 79.7221 bits (195), Expect = 2.773e-38
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            E Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G   L ++
Sbjct:  102 ESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_KLEP3 (Adenine phosphoribosyltransferase OS=Klebsiella pneumoniae (strain 342) GN=apt PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.775e-38
Identity = 49/87 (56.32%), Postives = 68/87 (78.16%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L  ERYKD  I+ V G EARGF+FG P+ALA+G  FVP+RKP+KLP E I+
Sbjct:   11 LKNSIQSIEDYPKPGILFRDVTSLLEDPKAYALSIELLTERYKDAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIA 97

HSP 2 Score: 73.559 bits (179), Expect = 2.775e-38
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L
Sbjct:   98 ESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIDATVKLIRRLGGEVHDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_CITK8 (Adenine phosphoribosyltransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=apt PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.775e-38
Identity = 48/87 (55.17%), Postives = 68/87 (78.16%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+
Sbjct:   11 LKNSIKSIHDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIA 97

HSP 2 Score: 75.485 bits (184), Expect = 2.775e-38
Identity = 33/73 (45.21%), Postives = 52/73 (71.23%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L ++
Sbjct:   98 ESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDLGGEQRLAKQ 170
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SHEHH (Adenine phosphoribosyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=apt PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.775e-38
Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 1 
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +A I ++I+ IP++PK GI+F+D+T+LL D +A++ TI L VE YKD+  + V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:    8 LALIKNSIKTIPNYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKDQGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRETIS 97

HSP 2 Score: 77.0258 bits (188), Expect = 2.775e-38
Identity = 35/75 (46.67%), Postives = 53/75 (70.67%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPL 589
            E Y LEYG DV+E+HV A+ A ++ L++DDL+ATGGT+ A ++L+ ++G  V + A VI LP+L G + L +  L
Sbjct:   98 ESYELEYGHDVLEIHVDAINAEDKVLVIDDLLATGGTIEATVKLIRQLGGSVNDAAFVISLPDLGGEQRLEKMDL 172
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_KLEP7 (Adenine phosphoribosyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=apt PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.615e-38
Identity = 49/87 (56.32%), Postives = 68/87 (78.16%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L  ERYKD  I+ V G EARGF+FG P+ALA+G  FVP+RKP+KLP E I+
Sbjct:   11 LKNSIQSIEDYPKPGILFRDVTSLLEDPKAYALSIELLTERYKDAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIA 97

HSP 2 Score: 73.1738 bits (178), Expect = 3.615e-38
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L
Sbjct:   98 ETYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIDATVKLIRRLGGEVHDAAFIINLFDLGGEQRL 167
The following BLAST results are available for this feature:
BLAST of DY260144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_ECO552.130e-3857.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO452.130e-3857.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO272.130e-3857.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO242.130e-3857.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_MANSM2.131e-3854.55Adenine phosphoribosyltransferase OS=Mannheimia su... [more]
APT_YERPS2.773e-3852.87Adenine phosphoribosyltransferase OS=Yersinia pseu... [more]
APT_KLEP32.775e-3856.32Adenine phosphoribosyltransferase OS=Klebsiella pn... [more]
APT_CITK82.775e-3855.17Adenine phosphoribosyltransferase OS=Citrobacter k... [more]
APT_SHEHH2.775e-3854.44Adenine phosphoribosyltransferase OS=Shewanella ha... [more]
APT_KLEP73.615e-3856.32Adenine phosphoribosyltransferase OS=Klebsiella pn... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260144 ID=DY260144; Name=DY260144; organism=Citrus clementina; type=EST; length=910bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
AAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCA
TATGGGTTTCCAGTCCCTCGGGCTCTGCCCCAAGCTTGAGAACCTCCTAA
AACCCCCCGGGAATAAAAGAGCCGTTTCATTGGCTTTTTTATTTTCATTT
AAGACCTTGGGGAAAGAGTGGTGGGGGAGCCGGGTTCCGTCCGCTTTTGG
TGGGGTTAAAAATGACAGGCTCATCAAAAAAATTCCCCCTTCCCCGGAAA
ACGCTGTATTTGAGGCCTTCCAAATTTCCTGGGAAATCCCTCTTGAACGG
TCTGTGAAGA
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