DY260144

Overview
NameDY260144
Unique NameDY260144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length910
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14652 contig Ccv1_Contig14652:1..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_PHOPR (Adenine phosphoribosyltransferase OS=Photobacterium profundum GN=apt PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.620e-38
Identity = 47/87 (54.02%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I ++I+ I D+PKPGI+F+D+T+L+ D +A+R T+ + +ERY +  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP EVIS
Sbjct:    2 IRNSIKSISDYPKPGILFRDVTSLMEDPEAYRATMQVLIERYSNTGITKVIGTEARGFLFGAPLALELGVGFVPVRKPGKLPREVIS 88

HSP 2 Score: 77.411 bits (189), Expect = 3.620e-38
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYGKD++E+HV A+  G++ L+VDDL+ATGGT+ A  +L  R+G  V + A VI LP++ G E L
Sbjct:   89 ESYELEYGKDILEIHVDAIVEGDKVLLVDDLLATGGTIEATTKLARRLGGVVEDAAFVINLPDIGGAERL 158
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_AERHH (Adenine phosphoribosyltransferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=apt PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.710e-38
Identity = 48/86 (55.81%), Postives = 65/86 (75.58%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            I ++I+ IPD+PKPGI+F+DIT+L+ +  AF+ TIDL    Y+D+ I+ + G EARGFIFG P+A A+G  FVP+RKP KLP  VI
Sbjct:    9 IEASIKTIPDYPKPGILFRDITSLIENADAFKATIDLLANHYRDQGITKIVGTEARGFIFGAPVAYAMGLGFVPVRKPGKLPRAVI 94

HSP 2 Score: 75.0998 bits (183), Expect = 4.710e-38
Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 562
            E Y+LEYG D +++H  A+  G++ L+VDDL+ATGGT+ A ++L+ R G  VV+ A +I LP L G
Sbjct:   96 ESYALEYGTDTLQLHTDAIVPGDKVLVVDDLLATGGTVDATVKLIRRAGGEVVDAAFIISLPSLGG 161
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_CLOBA (Adenine phosphoribosyltransferase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=apt PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.717e-38
Identity = 51/87 (58.62%), Postives = 64/87 (73.56%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +   IR+I  FPK GI F+DITTL+ D +  + +ID+FVE  KDK I ++ G EARGFIFG P+A A+GA FVP+RKP KLPGE IS
Sbjct:    3 LKEKIRIIDGFPKEGISFKDITTLIGDGEGLKASIDMFVEYLKDKEIDLIVGPEARGFIFGVPVAYALGAGFVPVRKPGKLPGETIS 89

HSP 2 Score: 74.7146 bits (182), Expect = 4.717e-38
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 2 
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            G      Y LEYG D +++H  +++ G+R  IVDDL+ATGGT+    +L+E  G  VV  A +IEL +LKGR+ LG+
Sbjct:   85 GETISVNYDLEYGSDSLQIHKDSIKKGQRVAIVDDLLATGGTVEGVAKLVEEAGGEVVSLAFLIELIDLKGRDKLGD 161
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_YERPP (Adenine phosphoribosyltransferase OS=Yersinia pestis (strain Pestoides F) GN=apt PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.131e-38
Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E IS
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIKLLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETIS 101

HSP 2 Score: 79.7221 bits (195), Expect = 6.131e-38
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            E Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G   L ++
Sbjct:  102 ESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_YERPN (Adenine phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=apt PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.131e-38
Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E IS
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIKLLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETIS 101

HSP 2 Score: 79.7221 bits (195), Expect = 6.131e-38
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            E Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G   L ++
Sbjct:  102 ESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_YERPG (Adenine phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=apt PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.131e-38
Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E IS
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIKLLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETIS 101

HSP 2 Score: 79.7221 bits (195), Expect = 6.131e-38
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            E Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G   L ++
Sbjct:  102 ESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_YERPE (Adenine phosphoribosyltransferase OS=Yersinia pestis GN=apt PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.131e-38
Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E IS
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIKLLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETIS 101

HSP 2 Score: 79.7221 bits (195), Expect = 6.131e-38
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            E Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G   L ++
Sbjct:  102 ESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_YERPA (Adenine phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=apt PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.131e-38
Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E IS
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIKLLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETIS 101

HSP 2 Score: 79.7221 bits (195), Expect = 6.131e-38
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            E Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G   L ++
Sbjct:  102 ESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_ENT38 (Adenine phosphoribosyltransferase OS=Enterobacter sp. (strain 638) GN=apt PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.136e-38
Identity = 48/87 (55.17%), Postives = 68/87 (78.16%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALEMGVGFVPVRKPRKLPRETIA 97

HSP 2 Score: 74.7146 bits (182), Expect = 6.136e-38
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L
Sbjct:   98 ESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_HERA2 (Adenine phosphoribosyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=apt PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.145e-38
Identity = 43/86 (50.00%), Postives = 61/86 (70.93%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            ++  +R IPDFP PG+ F+DIT LL + +AF   I+ F +RY ++ +  + GIE+RGFIFG P+AL +G  FVP+RKP KLP + I
Sbjct:    5 LTQFVRNIPDFPIPGVQFKDITPLLGNAQAFDAAIEHFAQRYANQQLQAIVGIESRGFIFGAPLALRLGIGFVPIRKPGKLPAQTI 90

HSP 2 Score: 84.7297 bits (208), Expect = 6.145e-38
Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = 2 
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVPV 601
            +YSLEYG + +E+H  A+QAG+R ++VDDL+ATGGT+ AA  LL ++G  VVE A +IEL  L GRE LG +P +  +
Sbjct:   93 DYSLEYGTNRLEIHNDALQAGDRVVVVDDLLATGGTVVAACDLLNQLGAEVVEAAFLIELTFLGGREKLGNRPFYAQI 170
The following BLAST results are available for this feature:
BLAST of DY260144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_PHOPR3.620e-3854.02Adenine phosphoribosyltransferase OS=Photobacteriu... [more]
APT_AERHH4.710e-3855.81Adenine phosphoribosyltransferase OS=Aeromonas hyd... [more]
APT_CLOBA4.717e-3858.62Adenine phosphoribosyltransferase OS=Clostridium b... [more]
APT_YERPP6.131e-3852.87Adenine phosphoribosyltransferase OS=Yersinia pest... [more]
APT_YERPN6.131e-3852.87Adenine phosphoribosyltransferase OS=Yersinia pest... [more]
APT_YERPG6.131e-3852.87Adenine phosphoribosyltransferase OS=Yersinia pest... [more]
APT_YERPE6.131e-3852.87Adenine phosphoribosyltransferase OS=Yersinia pest... [more]
APT_YERPA6.131e-3852.87Adenine phosphoribosyltransferase OS=Yersinia pest... [more]
APT_ENT386.136e-3855.17Adenine phosphoribosyltransferase OS=Enterobacter ... [more]
APT_HERA26.145e-3850.00Adenine phosphoribosyltransferase OS=Herpetosiphon... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260144 ID=DY260144; Name=DY260144; organism=Citrus clementina; type=EST; length=910bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
AAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCA
TATGGGTTTCCAGTCCCTCGGGCTCTGCCCCAAGCTTGAGAACCTCCTAA
AACCCCCCGGGAATAAAAGAGCCGTTTCATTGGCTTTTTTATTTTCATTT
AAGACCTTGGGGAAAGAGTGGTGGGGGAGCCGGGTTCCGTCCGCTTTTGG
TGGGGTTAAAAATGACAGGCTCATCAAAAAAATTCCCCCTTCCCCGGAAA
ACGCTGTATTTGAGGCCTTCCAAATTTCCTGGGAAATCCCTCTTGAACGG
TCTGTGAAGA
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