DY260144

Overview
NameDY260144
Unique NameDY260144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length910
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14652 contig Ccv1_Contig14652:1..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SALDC (Adenine phosphoribosyltransferase OS=Salmonella dublin (strain CT_02021853) GN=apt PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.041e-37
Identity = 48/87 (55.17%), Postives = 68/87 (78.16%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIA 97

HSP 2 Score: 73.1738 bits (178), Expect = 1.041e-37
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L
Sbjct:   98 ETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SALCH (Adenine phosphoribosyltransferase OS=Salmonella choleraesuis GN=apt PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.041e-37
Identity = 48/87 (55.17%), Postives = 68/87 (78.16%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIA 97

HSP 2 Score: 73.1738 bits (178), Expect = 1.041e-37
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L
Sbjct:   98 ETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SALA4 (Adenine phosphoribosyltransferase OS=Salmonella agona (strain SL483) GN=apt PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.041e-37
Identity = 48/87 (55.17%), Postives = 68/87 (78.16%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIA 97

HSP 2 Score: 73.1738 bits (178), Expect = 1.041e-37
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L
Sbjct:   98 ETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_CLOTE (Adenine phosphoribosyltransferase OS=Clostridium tetani GN=apt PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.043e-37
Identity = 50/89 (56.18%), Postives = 63/89 (70.79%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISRR 369
            +   IRVI  FPK GI F+D+TT+L + +AF+ TID  VE  KDKN+ VV G EARGF+FG P+A A+GA FVP+RK  KLP   IS +
Sbjct:    3 LKDKIRVIQGFPKEGISFKDVTTILQEKEAFKYTIDTLVEELKDKNVDVVVGPEARGFLFGAPLAYALGAGFVPVRKKGKLPSTTISSK 91

HSP 2 Score: 76.2554 bits (186), Expect = 1.043e-37
Identity = 34/71 (47.89%), Postives = 51/71 (71.83%), Query Frame = 2 
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            +Y LEYG D +EMH  +++ G+R +I DDL+ATGGT+ + I ++E +G  +V    +IEL +LKGRE LG+
Sbjct:   91 KYELEYGSDELEMHKDSIKPGQRVVIADDLLATGGTICSVIEMIESLGGEIVSINFLIELTDLKGREKLGK 161
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_DESHY (Adenine phosphoribosyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=apt PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.043e-37
Identity = 47/83 (56.63%), Postives = 61/83 (73.49%), Query Frame = 1 
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            IRVI DFPKPGI F+DITTLL D +A+R  +D  VER ++    ++ G EARGF+ G P+A A+G  FVP+RKP KLPG+ +S
Sbjct:   10 IRVIDDFPKPGISFKDITTLLKDGEAYRAAVDAIVERVRESQPDLIVGPEARGFLLGAPVAYALGIGFVPVRKPGKLPGKTVS 92

HSP 2 Score: 77.7962 bits (190), Expect = 1.043e-37
Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 2 
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            G+   E Y LEYG D +E+H  A+Q G+R  IVDDL+ATGGT SA  RL+E+ G  V   + +IEL  L+GR+ L
Sbjct:   88 GKTVSETYELEYGSDTLEVHADAIQPGQRIAIVDDLLATGGTTSATARLIEKTGAQVAGMSFLIELGFLEGRKRL 162
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_DESHD (Adenine phosphoribosyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=apt PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.044e-37
Identity = 47/83 (56.63%), Postives = 61/83 (73.49%), Query Frame = 1 
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            IRVI DFPKPGI F+DITTLL D +A+R  +D  VER ++    ++ G EARGF+ G P+A A+G  FVP+RKP KLPG+ +S
Sbjct:    7 IRVIDDFPKPGISFKDITTLLKDGEAYRAAVDAIVERVRESQPDLIVGPEARGFLLGAPVAYALGIGFVPVRKPGKLPGKTVS 89

HSP 2 Score: 77.7962 bits (190), Expect = 1.044e-37
Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 2 
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            G+   E Y LEYG D +E+H  A+Q G+R  IVDDL+ATGGT SA  RL+E+ G  V   + +IEL  L+GR+ L
Sbjct:   85 GKTVSETYELEYGSDTLEVHADAIQPGQRIAIVDDLLATGGTTSATARLIEKTGAQVAGMSFLIELGFLEGRKRL 159
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_ACIC5 (Adenine phosphoribosyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=apt PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.357e-37
Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            + S +R +PDFPKPGI+F DITTLL D + F   ID   E Y  KNI +V GIEARGFIFGP +A  + A FVP+RKP+KLP   +
Sbjct:   12 LKSLVRTVPDFPKPGILFYDITTLLKDRQGFAKLIDALAEHYIGKNIDLVLGIEARGFIFGPALAYRLNAGFVPVRKPRKLPARTV 97

HSP 2 Score: 72.4034 bits (176), Expect = 1.357e-37
Identity = 32/74 (43.24%), Postives = 50/74 (67.57%), Query Frame = 2 
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLF 592
            Y LEYG D +E+H  A++ G+R ++VDDL+ATGGT+ A ++L+ ++G  +   A  +EL  LKGRE   +  +F
Sbjct:  101 YDLEYGSDTLEIHEDAIEPGQRIVLVDDLLATGGTMEATVKLVRQLGGEIAGLAFAVELDFLKGRERFPDLDVF 174
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SALAR (Adenine phosphoribosyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=apt PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.768e-37
Identity = 48/87 (55.17%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK   I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYTLSIELLVERYKKAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIA 97

HSP 2 Score: 73.1738 bits (178), Expect = 1.768e-37
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L
Sbjct:   98 ETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_VIBCM (Adenine phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=apt PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.768e-37
Identity = 47/88 (53.41%), Postives = 67/88 (76.14%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP + +++
Sbjct:    9 IKSSIKSIPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRQTVAQ 96

HSP 2 Score: 73.559 bits (179), Expect = 1.768e-37
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G + L
Sbjct:   96 QSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLATGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_VIBCH (Adenine phosphoribosyltransferase OS=Vibrio cholerae GN=apt PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.768e-37
Identity = 47/88 (53.41%), Postives = 67/88 (76.14%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP + +++
Sbjct:    9 IKSSIKSIPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRQTVAQ 96

HSP 2 Score: 73.559 bits (179), Expect = 1.768e-37
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G + L
Sbjct:   96 QSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLATGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165
The following BLAST results are available for this feature:
BLAST of DY260144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SALDC1.041e-3755.17Adenine phosphoribosyltransferase OS=Salmonella du... [more]
APT_SALCH1.041e-3755.17Adenine phosphoribosyltransferase OS=Salmonella ch... [more]
APT_SALA41.041e-3755.17Adenine phosphoribosyltransferase OS=Salmonella ag... [more]
APT_CLOTE1.043e-3756.18Adenine phosphoribosyltransferase OS=Clostridium t... [more]
APT_DESHY1.043e-3756.63Adenine phosphoribosyltransferase OS=Desulfitobact... [more]
APT_DESHD1.044e-3756.63Adenine phosphoribosyltransferase OS=Desulfitobact... [more]
APT_ACIC51.357e-3756.98Adenine phosphoribosyltransferase OS=Acidobacteriu... [more]
APT_SALAR1.768e-3755.17Adenine phosphoribosyltransferase OS=Salmonella ar... [more]
APT_VIBCM1.768e-3753.41Adenine phosphoribosyltransferase OS=Vibrio choler... [more]
APT_VIBCH1.768e-3753.41Adenine phosphoribosyltransferase OS=Vibrio choler... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260144 ID=DY260144; Name=DY260144; organism=Citrus clementina; type=EST; length=910bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
AAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCA
TATGGGTTTCCAGTCCCTCGGGCTCTGCCCCAAGCTTGAGAACCTCCTAA
AACCCCCCGGGAATAAAAGAGCCGTTTCATTGGCTTTTTTATTTTCATTT
AAGACCTTGGGGAAAGAGTGGTGGGGGAGCCGGGTTCCGTCCGCTTTTGG
TGGGGTTAAAAATGACAGGCTCATCAAAAAAATTCCCCCTTCCCCGGAAA
ACGCTGTATTTGAGGCCTTCCAAATTTCCTGGGAAATCCCTCTTGAACGG
TCTGTGAAGA
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