DY260144

Overview
NameDY260144
Unique NameDY260144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length910
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14652 contig Ccv1_Contig14652:1..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_VIBC3 (Adenine phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=apt PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.768e-37
Identity = 47/88 (53.41%), Postives = 67/88 (76.14%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP + +++
Sbjct:    9 IKSSIKSIPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRQTVAQ 96

HSP 2 Score: 73.559 bits (179), Expect = 1.768e-37
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G + L
Sbjct:   96 QSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLATGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SOLUE (Adenine phosphoribosyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=apt PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.770e-37
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            + S IR +PDFPKPGI+F DITTLL D   F   ID   + Y+D  +  V GIEARGFIF P +A A+GA FVP+RKPKKLP E +
Sbjct:    4 LKSLIREVPDFPKPGILFYDITTLLKDPSGFHGVIDGLKDHYRDIKVDTVLGIEARGFIFAPALAYALGAGFVPVRKPKKLPAECV 89

HSP 2 Score: 72.0182 bits (175), Expect = 1.770e-37
Identity = 39/74 (52.70%), Postives = 47/74 (63.51%), Query Frame = 2 
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLF 592
            Y LEYG D +EMH  A+  G R LIVDDL+ATGGT SAA R+++  G  VV    VIEL  L GR+ L    +F
Sbjct:   93 YDLEYGTDTLEMHKDAIGNGHRVLIVDDLLATGGTASAAARMVQDAGGIVVGLGFVIELTFLAGRQRLNGHDVF 166
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SERP5 (Adenine phosphoribosyltransferase OS=Serratia proteamaculans (strain 568) GN=apt PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.298e-37
Identity = 45/87 (51.72%), Postives = 66/87 (75.86%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I  +I+ IPD+PKPGI+F+D+T+LL +  A+  +I+L VER+++  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP   +S
Sbjct:   26 IKDSIKTIPDYPKPGILFRDVTSLLENPLAYAASIELLVERFREAGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRATLS 112

HSP 2 Score: 76.2554 bits (186), Expect = 2.298e-37
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+H  A+ AG++ L+VDDL+ATGGT+ A  +L+ R+G  V + A +I LP+L G   L
Sbjct:  113 ESYELEYGTDKLEIHTDAISAGDKVLVVDDLLATGGTIEATAKLIRRLGGEVTDAAFIINLPDLGGEARL 182
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_SHEPW (Adenine phosphoribosyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=apt PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.303e-37
Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 1 
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +A I ++I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE YK++  + V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:    8 LALIKNSIKTIPDYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKEQGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRETIS 97

HSP 2 Score: 73.559 bits (179), Expect = 2.303e-37
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG DV+E+HV A+   ++ L+VDDL+ATGGT+ A ++L+  +G  V   A VI LP+L G + L
Sbjct:   98 ESYELEYGHDVLEIHVDAITKEDKVLVVDDLLATGGTIEATVKLIRNLGGQVNHAAFVISLPDLGGEKRL 167
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_BRASO (Adenine phosphoribosyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=apt PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.304e-37
Identity = 46/87 (52.87%), Postives = 59/87 (67.82%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I + +R IPD+PKPGI+F+DITTLL D +AFR  +D  V  +    I  VAGIEARGFI G  +A  + A FVP+RK  KLP + +S
Sbjct:    7 IKNTVRTIPDYPKPGILFRDITTLLADARAFRRAVDELVHPWAGSKIDKVAGIEARGFILGGAVAHQLSAGFVPIRKKGKLPHKTVS 93

HSP 2 Score: 83.1889 bits (204), Expect = 2.304e-37
Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 2 
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVPV 601
            Y+LEYG D MEMHV AVQ GER ++VDDL+ATGGT   A++LL ++G  VV    +I+LP+L G   L  + L VPV
Sbjct:   96 YALEYGTDEMEMHVDAVQPGERVILVDDLIATGGTAEGAVKLLRQIGATVVAACFIIDLPDLGGAAKL--RALDVPV 170
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_BRASB (Adenine phosphoribosyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=apt PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.304e-37
Identity = 46/87 (52.87%), Postives = 59/87 (67.82%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I + +R IPD+PKPGI+F+DITTLL D +AFR  +D  V  +    I  VAGIEARGFI G  +A  + A FVP+RK  KLP + +S
Sbjct:    7 IKNTVRTIPDYPKPGILFRDITTLLADARAFRRAVDELVHPWAGSKIDKVAGIEARGFILGGAVAHQLSAGFVPIRKKGKLPHKTVS 93

HSP 2 Score: 83.1889 bits (204), Expect = 2.304e-37
Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 2 
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVPV 601
            Y+LEYG D MEMHV AVQ GER ++VDDL+ATGGT   A++LL ++G  VV    +I+LP+L G   L  + L VPV
Sbjct:   96 YALEYGTDEMEMHVDAVQPGERVILVDDLIATGGTAEGAVKLLRQIGATVVAACFIIDLPDLGGAAKL--RALDVPV 170
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_YERE8 (Adenine phosphoribosyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=apt PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.997e-37
Identity = 47/87 (54.02%), Postives = 64/87 (73.56%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I  +I+ IPD+PK GI+F+D+T+LL D  A+  +I+L  ERY DK ++ V G EARGF+FG P+AL++G  FVP+RKP KLP   IS
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLEDPLAYAASIELLTERYLDKGVTKVVGTEARGFLFGAPVALSLGVGFVPVRKPGKLPRATIS 101

HSP 2 Score: 75.0998 bits (183), Expect = 2.997e-37
Identity = 31/73 (42.47%), Postives = 51/73 (69.86%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            E Y LEYG D +E+H  +++ G++ L++DDL+ATGGT+ A ++L+ ++G  V + A VI LP+L G   L ++
Sbjct:  102 ESYELEYGTDKLEIHTDSIKPGDKVLVIDDLLATGGTIEATVKLIRKLGGEVTDAAFVINLPDLGGEARLNDQ 174
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_HAES2 (Adenine phosphoribosyltransferase OS=Haemophilus somnus (strain 2336) GN=apt PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.001e-37
Identity = 48/88 (54.55%), Postives = 65/88 (73.86%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IP+ PK GI+F+DIT+L    +AF+ TIDL +ERYK K I+ V G E+RGFIFG P+ALA+   F+ +RKP KLP E I++
Sbjct:    7 IKSSIKSIPNHPKEGIIFRDITSLTEVPEAFQATIDLIIERYKSKGITKVIGTESRGFIFGAPVALALNVPFILVRKPGKLPRETIAQ 94

HSP 2 Score: 79.337 bits (194), Expect = 3.001e-37
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            + Y LEYG+D +EMHV ++QAG+  L++DDL+ATGGT+ A ++L+ER+   V   A VI LP+L G   L E
Sbjct:   94 QSYQLEYGQDTLEMHVSSIQAGDNVLVIDDLLATGGTIEATVKLVERLQGQVKHAAFVISLPDLGGEVRLRE 165
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_HAES1 (Adenine phosphoribosyltransferase OS=Haemophilus somnus (strain 129Pt) GN=apt PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.001e-37
Identity = 48/88 (54.55%), Postives = 65/88 (73.86%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IP+ PK GI+F+DIT+L    +AF+ TIDL +ERYK K I+ V G E+RGFIFG P+ALA+   F+ +RKP KLP E I++
Sbjct:    7 IKSSIKSIPNHPKEGIIFRDITSLTEVPEAFQATIDLIIERYKSKGITKVIGTESRGFIFGAPVALALNVPFILVRKPGKLPRETIAQ 94

HSP 2 Score: 79.337 bits (194), Expect = 3.001e-37
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            + Y LEYG+D +EMHV ++QAG+  L++DDL+ATGGT+ A ++L+ER+   V   A VI LP+L G   L E
Sbjct:   94 QSYQLEYGQDTLEMHVSSIQAGDNVLVIDDLLATGGTIEATVKLVERLQGQVKHAAFVISLPDLGGEVRLRE 165
[Close]
BLAST of DY260144 vs. ExPASy Swiss-Prot
Match: APT_ERWCT (Adenine phosphoribosyltransferase OS=Erwinia carotovora subsp. atroseptica GN=apt PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.907e-37
Identity = 46/87 (52.87%), Postives = 65/87 (74.71%), Query Frame = 1 
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I ++I+ IPD+PKPGI+F+D+T+LL D  A+  +ID+   RY++  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP   IS
Sbjct:   13 IKNSIKSIPDYPKPGILFRDVTSLLEDPVAYAASIDMLANRYRNTGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRPTIS 99

HSP 2 Score: 74.7146 bits (182), Expect = 3.907e-37
Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 2 
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            E Y LEYG D +E+H  A+ AG+  L++DDL+ATGGTL A ++L+ R+G  V + A +I L +L G + L E
Sbjct:  100 ESYELEYGSDTLEIHADAISAGDNVLVIDDLLATGGTLEATVKLIRRLGGTVNDAAFIINLFDLGGEQRLTE 171
The following BLAST results are available for this feature:
BLAST of DY260144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_VIBC31.768e-3753.41Adenine phosphoribosyltransferase OS=Vibrio choler... [more]
APT_SOLUE1.770e-3758.14Adenine phosphoribosyltransferase OS=Solibacter us... [more]
APT_SERP52.298e-3751.72Adenine phosphoribosyltransferase OS=Serratia prot... [more]
APT_SHEPW2.303e-3754.44Adenine phosphoribosyltransferase OS=Shewanella pi... [more]
APT_BRASO2.304e-3752.87Adenine phosphoribosyltransferase OS=Bradyrhizobiu... [more]
APT_BRASB2.304e-3752.87Adenine phosphoribosyltransferase OS=Bradyrhizobiu... [more]
APT_YERE82.997e-3754.02Adenine phosphoribosyltransferase OS=Yersinia ente... [more]
APT_HAES23.001e-3754.55Adenine phosphoribosyltransferase OS=Haemophilus s... [more]
APT_HAES13.001e-3754.55Adenine phosphoribosyltransferase OS=Haemophilus s... [more]
APT_ERWCT3.907e-3752.87Adenine phosphoribosyltransferase OS=Erwinia carot... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260144 ID=DY260144; Name=DY260144; organism=Citrus clementina; type=EST; length=910bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
AAGCTAAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCA
TATGGGTTTCCAGTCCCTCGGGCTCTGCCCCAAGCTTGAGAACCTCCTAA
AACCCCCCGGGAATAAAAGAGCCGTTTCATTGGCTTTTTTATTTTCATTT
AAGACCTTGGGGAAAGAGTGGTGGGGGAGCCGGGTTCCGTCCGCTTTTGG
TGGGGTTAAAAATGACAGGCTCATCAAAAAAATTCCCCCTTCCCCGGAAA
ACGCTGTATTTGAGGCCTTCCAAATTTCCTGGGAAATCCCTCTTGAACGG
TCTGTGAAGA
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