DY260146

Overview
NameDY260146
Unique NameDY260146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1179
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1432 contig Ccv1_Contig1432:1..1179. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL59_ARATH (GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana GN=At3g53100 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.409e-27
Identity = 79/210 (37.62%), Postives = 114/210 (54.29%), Query Frame = 2
Query:  101 VLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDF-PNGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSA--ARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            VL+ +  ++  +K A  VP   +FGDS+VD GNNN L S+ ++N+LPYG DF    PTGRF NGK  VD  A+ LGF  Y P + +  A  ++IL G N+ASA++G  + T    G  IS + Q+  Y+    +V  ++G    A    SR I+ +  GS+ +L NY   PLL   + +  P       ++      Q LY  GAR+I V
Sbjct:   11 VLLLVSCFFCKSKGAV-VPALIMFGDSIVDVGNNNNLLSIVKSNFLPYGRDFIDQRPTGRFCNGKLAVDFSAEYLGFSSYPPAFLSREASNENILIGANFASASSGYYDATSVPFGS-ISLTRQLSYYRAYQNRVTRMIG-RGNARILFSRGIHILSAGSSDFLQNYYINPLL---NILNTPDQFADILLRSFSEFIQNLYELGARRIGV 214          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL79_ARATH (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 8.370e-27
Identity = 74/206 (35.92%), Postives = 116/206 (56.31%), Query Frame = 2
Query:  161 YFIFGDSLVDNGNNNQLSSLARANYLPYGIDFP-NGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQD-ILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICVDWSGTNGGPPQSFGSKN 772
            + +FGDSLVDNGNN+ L++ ARA+  PYGIDFP + PTGRFSNG    D+I++ LG +  +P  S    +D +LRG N+ASA  GI  +TG Q  + I  + Q++ ++    +V  L+G E++    ++  +  I LG N ++NNY   P        + P ++  F I       + +Y+ GAR++ V  +G  G  P     ++
Sbjct:   31 FLVFGDSLVDNGNNDFLATTARADNYPYGIDFPTHRPTGRFSNGLNIPDLISEHLGQESPMPYLSPMLKKDKLLRGANFASAGIGILNDTGIQFLNIIRITKQLEYFEQYKVRVSGLVG-EEEMNRLVNGALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYV-VFVISEYRKVLRKMYDLGARRVLVTGTGPMGCVPAELAQRS 234          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL80_ARATH (GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana GN=At5g37690 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.093e-26
Identity = 85/228 (37.28%), Postives = 125/228 (54.82%), Query Frame = 2
Query:   83 VVMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLS-SLARANYLPYGIDFPNGP-TGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQD-ILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAAN-YLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHH-FQALYNYGARKICVDWSGTNGGPP 751
            +++ L + I I  Y     A+      +IFGDSL + GNNN L  SLARA++  YG+DF  G  TGRF+NG+T  D+I+  LG     P  S ++  D  L G+NYAS  AGI  ETG     R++F+ Q+  ++ T + +   +G  D AAN +++  +Y IGLGSN Y+NN+L  P + +    T    ++   +  TLH+    +Y  GARK+     G  G  P
Sbjct:    2 MILRLALAIVISTYATAQPASTSSLVTYIFGDSLTEVGNNNFLQYSLARADFPYYGVDFSGGKATGRFTNGRTIGDIISTKLGILSPPPYLSLSQNDDAFLSGINYASGGAGILNETGIYFIQRLTFNDQINCFKKTKEVIRAKIG--DGAANKHVNDAMYFIGLGSNDYVNNFL-QPFMADGQQYTHDEFVE--LLTSTLHNQLTTIYKLGARKVIFHGLGPLGCIP 224          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL67_ARATH (GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.181e-26
Identity = 78/236 (33.05%), Postives = 126/236 (53.39%), Query Frame = 2
Query:   80 WVVMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPYS-AARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNY-LPAPLLFNRSSITPPSHMQTFFIQITLHHFQ----ALYNYGARKICVDWSGTNGGPPQSFGS 766
            W++M + + + +        AA     +F+FGDSLVD+GNNN L + ARA+  PYGID+P G PTGRFSNG    D+I++ +G +  +P  S    G+ +L G N+ASA  GI  +TG Q  + +    Q + +Q   ++V  ++G+ D+    ++  +  + LG N ++NNY  P      +SS+         F Q+ +  ++    +LY  GAR++ V  +G  G  P    S
Sbjct:    8 WIIMTVALSVTLFLMPQQTNAAR---AFFVFGDSLVDSGNNNYLVTTARADSPPYGIDYPTGRPTGRFSNGLNLPDIISEQIGSEPTLPILSPELTGEKLLIGANFASAGIGILNDTGVQFLNILRIGRQFELFQEYQERVSEIIGS-DKTQQLVNGALVLMTLGGNDFVNNYFFPISTRRRQSSLGE-------FSQLLISEYKKILTSLYELGARRVMVTGTGPLGCVPAELAS 232          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL77_ARATH (GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.693e-25
Identity = 79/232 (34.05%), Postives = 119/232 (51.29%), Query Frame = 2
Query:  161 YFIFGDSLVDNGNNNQLSSLARANYLPYGIDFP-NGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSA--ARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICVDWSGTNGGPPQSFGSKNPKRKNFVAKDGMTQPKFQKKAQRAS 847
            +F+FGDSLVD+GNNN L + ARA+  PYGIDFP   PTGRFSNG    D+I++ +G +    PY +   RG+ +L G N+ASA  GI  +TG Q  + I    Q+  +Q   Q+V  L+G + Q    +S+ +  I +G N ++NNY   P        T P +++   I         L + G  ++ V  +G  G  P             +A+ G +  +   + QRA+
Sbjct:   29 FFVFGDSLVDSGNNNYLVTTARADSPPYGIDFPTRRPTGRFSNGLNIPDLISEAIGNEEPPLPYLSPELRGRSLLNGANFASAGIGILNDTGFQFINIIRMYQQLDYFQQYQQRVSRLIG-KPQTQRLVSQALVLITVGGNDFVNNYFLFPYSARSRQFTLPDYVR-LLISEYKKILLRLNSLGVGRVLVTGAGPLGCAPAE-----------LARSGTSNGRCSAELQRAA 247          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL32_ARATH (GDSL esterase/lipase At2g03980 OS=Arabidopsis thaliana GN=At2g03980 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.517e-25
Identity = 70/194 (36.08%), Postives = 102/194 (52.58%), Query Frame = 2
Query:  155 PCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY---SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICVD 724
            P +++ GDSLVD+GNNN L+++ ++N+ PYG DF  G  TGRFSNGKT  D IA   G    +P Y   S      I  G+NYASA  GI  +TGRQ+G  +S S QV  +Q T+   +     + +   +L+  ++ I +G N Y         LFN +  T  +      +   L   + L+  GARK  ++
Sbjct:   42 PAFYVIGDSLVDSGNNNHLTTMVKSNFPPYGSDFEGGKATGRFSNGKTIADYIAIYYGLP-LVPAYLGLSQEEKNSISTGINYASAGCGILPQTGRQIGTCLSLSVQVDMFQETITNNLKKNFKKSELREHLAESLFMIAIGVNDY-------TFLFNET--TDANEFANKLLHDYLLQIERLHKLGARKFFIN 225          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 8.662e-24
Identity = 73/193 (37.82%), Postives = 102/193 (52.85%), Query Frame = 2
Query:  152 VPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDF-PNGPTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            VP   I GDS+VD GNNN   +L +AN+ PYG DF  +  TGRFSNGK   D  A+ LGF  Y   Y    A   ++L G N+AS A+G  + T     + I+ S Q+KNY+    +V N++G E +A    S  I+ +  GS+ +L +Y   P+L   + I  P       ++      Q LY  GAR+I V
Sbjct:   28 VPALIIMGDSVVDAGNNNHRITLVKANFPPYGRDFVAHSATGRFSNGKLATDFTAENLGFTSYPVAYLSQEANETNLLTGANFASGASGFDDATA-IFYNAITLSQQLKNYKEYQNKVTNIVGKE-RANEIFSGAIHLLSTGSSDFLQSYYINPIL---NRIFTPDQYSDHLLRSYSTFVQNLYGLGARRIGV 215          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: APG2_ARATH (GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.131e-23
Identity = 80/238 (33.61%), Postives = 119/238 (50.00%), Query Frame = 2
Query:  143 APQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPN-GPTGRFSNGKTTVDVIAQLLGFDGYIPPYSA--ARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICVDWSGTNGGPPQSFGSKNPKRKNFVAKDGMTQPKFQKKAQRAS 847
            A  VP    FGDS+VD GNNN L +L RA+Y PYG DF N   TGRF NGK   D+ A+ LGF  Y P Y +  A G+++L G N+ASAA+G  ++    L   I    QV+ ++    +++ + G++ +A + +   I  +  GS+ ++ NY   PLL+   ++       +F I       + +Y  GARKI V      G  P +        K  V++       F KK   A+
Sbjct:   25 AQLVPAIMTFGDSVVDVGNNNYLPTLFRADYPPYGRDFANHKATGRFCNGKLATDITAETLGFTKYPPAYLSPEASGKNLLIGANFASAASGY-DDKAALLNHAIPLYQQVEYFKEYKSKLIKIAGSK-KADSIIKGAICLLSAGSSDFVQNYYVNPLLYKVYTV---DAYGSFLIDNFSTFIKQVYAVGARKIGVTSLPPTGCLPAARTLFGFHEKGCVSRLNTDAQNFNKKLNAAA 257          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL66_ARATH (GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.477e-23
Identity = 76/225 (33.78%), Postives = 115/225 (51.11%), Query Frame = 2
Query:  155 PCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICVDWSGTNGGPPQS------FGSKNPKRKNFVAKD 802
            P   +FGDS VD+GNNNQ+S++ ++N+ PYG D+ +G  TGRFSNG+   D I++ LG    +P Y   A    D   GV +ASA  G+   T   L   +    +V+ Y+    ++ + LG E++A   +S  +Y I +G+N +L NY   P    + S+   +  Q F I I       +Y  GARK+ +      G  P        +GSK  +  N VA+D
Sbjct:   28 PALIVFGDSTVDSGNNNQISTVLKSNFQPYGRDYFDGKATGRFSNGRIAPDFISEGLGLKNAVPAYLDPAYNIADFATGVCFASAGTGLDNATSAVL-SVMPLWKEVEYYKEYQTRLRSYLG-EEKANEIISESLYLISIGTNDFLENYYLLPRKLRKYSV---NEYQYFLIGIAADFVTDIYRLGARKMSLSGLSPFGCLPLERTTQLFYGSKCIEEYNIVARD 247          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL31_ARATH (GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana GN=At1g74460 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.930e-23
Identity = 80/230 (34.78%), Postives = 114/230 (49.57%), Query Frame = 2
Query:   74 KWWVVMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLS-SLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQDIL--RGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICVDWSGTNGGPP 751
            K+  + VL +++ I  Y    K        FIFGDSL D GNN  L  SLA AN   YGIDF NG P GRF+NG+T  D+I   +G    +     +  +D++   GVNYAS   GI  ETG     R S   Q++ +Q T   VV  +G + +A  +     Y + LGSN ++NNYL    +++ S          + ++      + L++ GARK+ V   G  G  P
Sbjct:    2 KFCAIFVLFIVLAINGY--DCKIVQ-----FIFGDSLSDVGNNKNLPRSLATANLPFYGIDFGNGLPNGRFTNGRTVSDIIGDKIGLPRPVAFLDPSMNEDVILENGVNYASGGGGILNETGGYFIQRFSLWKQIELFQGTQDVVVAKIGKK-EADKFFQDARYVVALGSNDFINNYLMP--VYSDSWKYNDQTFVDYLMETLESQLKVLHSLGARKLMVFGLGPMGCIP 221          
The following BLAST results are available for this feature:
BLAST of DY260146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
GDL59_ARATH6.409e-2737.62GDSL esterase/lipase At3g53100 OS=Arabidopsis thal... [more]
GDL79_ARATH8.370e-2735.92GDSL esterase/lipase At5g33370 OS=Arabidopsis thal... [more]
GDL80_ARATH1.093e-2637.28GDSL esterase/lipase At5g37690 OS=Arabidopsis thal... [more]
GDL67_ARATH3.181e-2633.05GDSL esterase/lipase At4g28780 OS=Arabidopsis thal... [more]
GDL77_ARATH2.693e-2534.05GDSL esterase/lipase At5g18430 OS=Arabidopsis thal... [more]
GDL32_ARATH3.517e-2536.08GDSL esterase/lipase At2g03980 OS=Arabidopsis thal... [more]
GDL72_ARATH8.662e-2437.82GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]
APG2_ARATH1.131e-2333.61GDSL esterase/lipase APG OS=Arabidopsis thaliana G... [more]
GDL66_ARATH1.477e-2333.78GDSL esterase/lipase At4g26790 OS=Arabidopsis thal... [more]
GDL31_ARATH1.930e-2334.78GDSL esterase/lipase At1g74460 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260146 ID=DY260146; Name=DY260146; organism=Citrus clementina; type=EST; length=1179bp
TCAATTTTGATCTTTCCTCATCTCATCTGGGTTTTAGAATTTGTTTCCTC
TTTCGGGCTTGATGGATTTAAGAAAATGGTGGGTGGTGATGGTGTTGTTG
GTTTTGATCAATATACAGAATTATTATTATGGGGCTAAAGCAGCGCCTCA
AGTGCCTTGCTACTTCATATTTGGGGATTCATTGGTGGATAACGGGAATA
ATAATCAACTATCTTCATTGGCTAGAGCTAATTATTTGCCTTATGGAATT
GACTTCCCTAATGGTCCTACAGGAAGATTTTCCAATGGCAAAACTACCGT
CGATGTCATTGCCCAACTTCTGGGCTTCGACGGTTACATTCCTCCATATT
CGGCTGCAAGAGGTCAGGATATACTCAGAGGAGTCAATTATGCATCTGCA
GCTGCTGGTATCAGGGAGGAAACTGGTCGACAGCTGGGAGATCGAATCAG
TTTTAGTGGGCAGGTAAAGAATTACCAAAACACGGTTCAGCAAGTAGTGA
ACTTACTAGGAAATGAAGATCAAGCTGCAAATTACCTGAGCCGATGCATA
TACTCAATCGGATTAGGCAGCAACCACTACCTCAACAACTACCTCCCAGC
CCCTCTATTATTCAACCGGTCGTCCATTACACCCCCGAGCCATATGCAGA
CCTTCTTTATTCAAATTACACTCCACCACTTTCAGGCGTTGTACAACTAT
GGGGCAAGGAAAATTTGTGTTGATTGGAGTGGAACAAATGGGGGGCCCCC
CCAATCATTTGGCTCAAAAAATCCCAAAAGGAAAAACTTTGTTGCCAAAG
ATGGAATGACCCAACCTAAATTTCAAAAAAAGGCCCAAAGGGCCTCCGTT
TAAAAATTTAAACACAACAATTCGAAGCCCAATTTTTCTCACATCCAGGT
TTTGGGGTTTTCCCCAGAAATACAACCCACCCCCCCCCCCTATATTTTTT
AAAGATTACAAAATTGGGGGTGCGTGTGGGTTTGAAAAAAAAAAAAGGGG
AAAATTTATTCTTTTTCCTCCCTCCTCAAAAACCACCCCTCCCAACAAAG
AGAAGGGGAAAATTTGTGTTTTTGGAGGGTTCTTTTCATTCCTATATGGA
AAACGGCGTATAAAAAAATAAAACTCTCTCCACCCCAAAATTTTTATTCT
CTTCTTTTGATATATATCTCTTATTCTAA
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