DY260146

Overview
NameDY260146
Unique NameDY260146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1179
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1432 contig Ccv1_Contig1432:1..1179. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL30_ARATH (GDSL esterase/lipase At1g73610 OS=Arabidopsis thaliana GN=At1g73610 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.291e-23
Identity = 69/193 (35.75%), Postives = 101/193 (52.33%), Query Frame = 2
Query:  152 VPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPYSAAR--GQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            V   F FGDS++D GNNN L S+++ N+ PYG DF  G  TGRF NG+   D+IA+ LG    +P Y        D+  GV +AS  +G+   T R  G  I  S QV ++QN + ++  ++GN++QA   +S  +Y I  G+N     Y        R   T P++     +  T    ++LY+ GARK  V
Sbjct:   33 VSALFAFGDSILDTGNNNLLLSVSKVNFYPYGRDFIGGRATGRFGNGRVFSDIIAEGLGLKNLLPAYRDPYLWNNDLTTGVCFASGGSGLDPITARTTGS-IWVSDQVTDFQNYITRLNGVVGNQEQANAVISNAVYLISAGNNDIAITYFTTGA--RRLQYTLPAYNDQ-LVSWTRDLIKSLYDMGARKFAV 221          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL48_ARATH (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 9.576e-23
Identity = 68/195 (34.87%), Postives = 102/195 (52.31%), Query Frame = 2
Query:  140 AAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKI 715
            A  ++P   +FGDS VD+GNNN +S++ARAN+ PYG DFP G  TGRF NG+ + D  ++  G    +P Y   +    D   GV +ASA  G    T   LG  I    +V+ ++     +   LG+  +AA  +   +Y + +G+N +L NY   P   +R S    S  Q F ++I     + +Y  GARK+
Sbjct:   22 AGAKIPAIIVFGDSSVDSGNNNFISTMARANFEPYGRDFPGGRATGRFCNGRLSSDFTSEAYGLKPTVPAYLDPSYNISDFATGVCFASAGTGYDNSTADVLG-VIPLWKEVEYFKEYQSNLSAYLGHR-RAAKIIRESLYIVSIGTNDFLENYYTLP---DRRSQFSISQYQDFLVEIAEVFLKDIYRLGARKM 211          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL23_ARATH (GDSL esterase/lipase At1g58430 OS=Arabidopsis thaliana GN=At1g58430 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 9.576e-23
Identity = 72/218 (33.03%), Postives = 111/218 (50.92%), Query Frame = 2
Query:   80 WVVMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLS-SLARANYLPYGIDFPN-GPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAAR--GQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            + + +   L+   N    AK  P  P   IFGDS VD GNNN  S ++ RA ++PYGID PN  P GRFSNGK   D+IA  L    ++PP+       Q+I+ GV +ASA AG  ++T       I  S Q   +++ + ++ +++G++ +A   ++  +  +  G N ++ NY   P    R      S  Q F +    +  + LY+ G RKI V
Sbjct:    9 FTLFITTTLLGSCNASAKAKTQPLFPAILIFGDSTVDTGNNNYPSQTIFRAKHVPYGIDLPNHSPNGRFSNGKIFSDIIATKLNIKQFVPPFLQPNLTDQEIVTGVCFASAGAGYDDQTSLTT-QAIRVSEQPNMFKSYIARLKSIVGDK-KAMKIINNALVVVSAGPNDFILNYYEVPSW--RRMYPSISDYQDFVLSRLNNFVKELYSLGCRKILV 222          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL89_ARATH (GDSL esterase/lipase At5g63170 OS=Arabidopsis thaliana GN=At5g63170 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.633e-22
Identity = 66/216 (30.56%), Postives = 112/216 (51.85%), Query Frame = 2
Query:   83 VVMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDF-PNGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSA--ARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            +V+V ++ ++I +       A  +P    FGDS++D GNNN L +L + N+ PYG DF     TGRF NG+   D+IA+ LG    +P Y +      DIL GV++AS  +G+   T R  G  I    Q+ +++  + ++ ++ G+E++  + +S  ++ I  G+N     Y   P+   R +I   + +    +  T    + LYN GARK  +
Sbjct:   10 IVLVSVISVSIVH-------AGNIPAVIAFGDSILDTGNNNYLMTLTKVNFYPYGRDFVTRRATGRFGNGRIPTDLIAEGLGIKNIVPAYRSPFLEPNDILTGVSFASGGSGLDPMTARIQG-VIWVPDQLNDFKAYIAKLNSITGDEEKTRSIISNAVFVISAGNNDIAITYFTNPIRNTRYTIFSYTDL---MVSWTQSFIKELYNLGARKFAI 214          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL33_ARATH (GDSL esterase/lipase At2g04020 OS=Arabidopsis thaliana GN=At2g04020 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 2.786e-22
Identity = 74/235 (31.49%), Postives = 113/235 (48.09%), Query Frame = 2
Query:   56 GLMDLRKWWVVMVLLVLINIQNYYYGAKAAPQV-------PCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY---SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNL-LGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICVD 724
            GL    + +++++LL  +N+   Y    +  +        P +++ GDSLVD GNNN L ++ RANY PYG DF  G  TGRFSNGKT  D IA        +P Y   S  R   I  G+NYASA  GIR  TG+  G  +S S QV  ++ T+++ +        +   +L+  ++   +G N Y          F  + +T  +      +   L   + L+  GARK  ++
Sbjct:    2 GLPSSLESYLLLILLSFLNVSTIYSSKPSKEEAVLFGGNFPAFYVIGDSLVDPGNNNHLPTMIRANYPPYGSDFEGGKATGRFSNGKTIADYIAIYYKLP-LVPAYLGLSDDRKDTISTGMNYASAGCGIRRLTGKIAGKCLSLSKQVDLFEETIEKHLKTNFKTPYELREHLAHSLFMTVIGVNDY---------AFFYTRLTDANDFADELLHKFLKKIEKLHKLGARKFFIN 226          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.639e-22
Identity = 69/194 (35.57%), Postives = 94/194 (48.45%), Query Frame = 2
Query:  143 APQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKI 715
            A ++P   +FGDS VD GNNN + ++AR+N+ PYG DF  G PTGRF NGK   D +++ LG    IP Y   +    D   GV +ASAA G    T   L   +    +   Y    Q  +     +D+    +   +Y I +G+N +L NY   P    RSS    S  Q F   I     + L+  GARKI
Sbjct:   23 AGKIPAIIVFGDSSVDAGNNNYIPTVARSNFEPYGRDFVGGKPTGRFCNGKIATDFMSEALGLKPIIPAYLDPSYNISDFATGVTFASAATGYDNATSDVLS--VLPLWKQLEYYKEYQTKLKAYQGKDRGTETIESSLYLISIGTNDFLENYFAFP---GRSSQYSVSLYQDFLAGIAKEFVKKLHGLGARKI 211          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL90_ARATH (GDSL esterase/lipase At5g42170 OS=Arabidopsis thaliana GN=At5g42160/At5g42170 PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 6.207e-22
Identity = 67/194 (34.54%), Postives = 102/194 (52.58%), Query Frame = 2
Query:  152 VPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYL-SRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            +P    FGDS+VD+GNNN L +  + N+ PYG DFP    TGRFS+G+   D++A+ LG    IP Y     + +D+L+GVN+AS  +G    T + L   +S S Q+KN+Q    ++  ++G E   AN+L    +Y +   SN   + Y    + +N++S         +          ALY  GAR+I V
Sbjct:   48 IPGIITFGDSIVDSGNNNHLRTALKCNFPPYGKDFPGKIATGRFSDGRVPSDIVAERLGIAETIPAYLNPKLKNEDLLKGVNFASGGSGYDPLTAK-LVKVVSLSDQLKNFQEYKNKLKVIVGEE--KANFLVKNSLYLVVASSNDIAHTYTARSIKYNKTSYA------DYLADSASKFVSALYGLGARRIGV 232          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL55_ARATH (GDSL esterase/lipase At3g43550 OS=Arabidopsis thaliana GN=At3g43550 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 8.107e-22
Identity = 68/219 (31.05%), Postives = 110/219 (50.23%), Query Frame = 2
Query:   74 KWWVVMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            K  ++ + LVLI ++ Y         +P   +FGDS++D GNNN L +L + N+ PYG D+P G  TGRFS+G+   D+IA+ LG    +P Y     +  D+L+GV +AS   G    T + +   IS   Q+  ++  + ++    G E++A + L    + +   SN   + YL     ++R+S         F     +H  + L+  GARKI V
Sbjct:    2 KLQIIWLALVLIAVETYAVKQGKNVTIPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLVKTLPAYMNPYLKPHDLLKGVTFASGGTGYDPLTAK-IMSVISVWDQLIYFKEYISKIKRHFG-EEKAKDILEHSFFLVVSSSNDLAHTYLAQAHRYDRTSYA------NFLADSAVHFVRELHKLGARKIGV 212          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL26_ARATH (GDSL esterase/lipase At1g59030/At1g59406 OS=Arabidopsis thaliana GN=At1g59030 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.059e-21
Identity = 71/221 (32.13%), Postives = 114/221 (51.58%), Query Frame = 2
Query:   83 VVMVLLVLINIQNYYYGAKAAPQ-----VPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            +++  LVLI ++     A AA Q     +P   +FGDS++D GNNN L +L + N+ PYG D+P G  TGRFS+G+   D+IA+ LG    +P Y     + +D+L+GV +AS   G    T + +   IS   Q+ N++  + ++    G E++A + L    + +   SN   + YL     ++R+S         F     +H  + L+  GARKI V
Sbjct:    5 ILLFALVLIFVE-----ANAATQGKNTTIPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAK-IMSVISVWDQLINFKEYISKIKRHFG-EEKAKDILEHSFFLVVSSSNDLAHTYLAQTHRYDRTSYA------NFLADSAVHFVRELHKLGARKIGV 212          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL25_ARATH (GDSL esterase/lipase At1g58725 OS=Arabidopsis thaliana GN=At1g58725 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 1.059e-21
Identity = 71/221 (32.13%), Postives = 114/221 (51.58%), Query Frame = 2
Query:   83 VVMVLLVLINIQNYYYGAKAAPQ-----VPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            +++  LVLI ++     A AA Q     +P   +FGDS++D GNNN L +L + N+ PYG D+P G  TGRFS+G+   D+IA+ LG    +P Y     + +D+L+GV +AS   G    T + +   IS   Q+ N++  + ++    G E++A + L    + +   SN   + YL     ++R+S         F     +H  + L+  GARKI V
Sbjct:    5 ILLFALVLIFVE-----ANAATQGKNTTIPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAK-IMSVISVWDQLINFKEYISKIKRHFG-EEKAKDILEHSFFLVVSSSNDLAHTYLAQTHRYDRTSYA------NFLADSAVHFVRELHKLGARKIGV 212          
The following BLAST results are available for this feature:
BLAST of DY260146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
GDL30_ARATH3.291e-2335.75GDSL esterase/lipase At1g73610 OS=Arabidopsis thal... [more]
GDL48_ARATH9.576e-2334.87GDSL esterase/lipase At2g42990 OS=Arabidopsis thal... [more]
GDL23_ARATH9.576e-2333.03GDSL esterase/lipase At1g58430 OS=Arabidopsis thal... [more]
GDL89_ARATH1.633e-2230.56GDSL esterase/lipase At5g63170 OS=Arabidopsis thal... [more]
GDL33_ARATH2.786e-2231.49GDSL esterase/lipase At2g04020 OS=Arabidopsis thal... [more]
GDL34_ARATH3.639e-2235.57GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
GDL90_ARATH6.207e-2234.54GDSL esterase/lipase At5g42170 OS=Arabidopsis thal... [more]
GDL55_ARATH8.107e-2231.05GDSL esterase/lipase At3g43550 OS=Arabidopsis thal... [more]
GDL26_ARATH1.059e-2132.13GDSL esterase/lipase At1g59030/At1g59406 OS=Arabid... [more]
GDL25_ARATH1.059e-2132.13GDSL esterase/lipase At1g58725 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260146 ID=DY260146; Name=DY260146; organism=Citrus clementina; type=EST; length=1179bp
TCAATTTTGATCTTTCCTCATCTCATCTGGGTTTTAGAATTTGTTTCCTC
TTTCGGGCTTGATGGATTTAAGAAAATGGTGGGTGGTGATGGTGTTGTTG
GTTTTGATCAATATACAGAATTATTATTATGGGGCTAAAGCAGCGCCTCA
AGTGCCTTGCTACTTCATATTTGGGGATTCATTGGTGGATAACGGGAATA
ATAATCAACTATCTTCATTGGCTAGAGCTAATTATTTGCCTTATGGAATT
GACTTCCCTAATGGTCCTACAGGAAGATTTTCCAATGGCAAAACTACCGT
CGATGTCATTGCCCAACTTCTGGGCTTCGACGGTTACATTCCTCCATATT
CGGCTGCAAGAGGTCAGGATATACTCAGAGGAGTCAATTATGCATCTGCA
GCTGCTGGTATCAGGGAGGAAACTGGTCGACAGCTGGGAGATCGAATCAG
TTTTAGTGGGCAGGTAAAGAATTACCAAAACACGGTTCAGCAAGTAGTGA
ACTTACTAGGAAATGAAGATCAAGCTGCAAATTACCTGAGCCGATGCATA
TACTCAATCGGATTAGGCAGCAACCACTACCTCAACAACTACCTCCCAGC
CCCTCTATTATTCAACCGGTCGTCCATTACACCCCCGAGCCATATGCAGA
CCTTCTTTATTCAAATTACACTCCACCACTTTCAGGCGTTGTACAACTAT
GGGGCAAGGAAAATTTGTGTTGATTGGAGTGGAACAAATGGGGGGCCCCC
CCAATCATTTGGCTCAAAAAATCCCAAAAGGAAAAACTTTGTTGCCAAAG
ATGGAATGACCCAACCTAAATTTCAAAAAAAGGCCCAAAGGGCCTCCGTT
TAAAAATTTAAACACAACAATTCGAAGCCCAATTTTTCTCACATCCAGGT
TTTGGGGTTTTCCCCAGAAATACAACCCACCCCCCCCCCCTATATTTTTT
AAAGATTACAAAATTGGGGGTGCGTGTGGGTTTGAAAAAAAAAAAAGGGG
AAAATTTATTCTTTTTCCTCCCTCCTCAAAAACCACCCCTCCCAACAAAG
AGAAGGGGAAAATTTGTGTTTTTGGAGGGTTCTTTTCATTCCTATATGGA
AAACGGCGTATAAAAAAATAAAACTCTCTCCACCCCAAAATTTTTATTCT
CTTCTTTTGATATATATCTCTTATTCTAA
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