DY260146

Overview
NameDY260146
Unique NameDY260146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1179
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1432 contig Ccv1_Contig1432:1..1179. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL44_ARATH (GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana GN=At2g31550 PE=2 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 3.406e-20
Identity = 68/200 (34.00%), Postives = 100/200 (50.00%), Query Frame = 2
Query:  134 AKAAPQVPCYFIFGDSLVDNGNNNQ-LSSLARANYLPYGIDFPNGPT-GRFSNGKTTVDVIAQLLGFDGYIPPYSAAR--GQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            A   P  P   IFGDS VD GNNN  L ++ RA + PYG+D P+G   GRFSNGK   D+IA  L    +IPP+       QDIL GV +ASA AG  + T       I  S Q   +++ + ++  ++G++ +A   ++     +  G N ++ NY   P    R      S  Q F ++   +  + LY+ G R + V
Sbjct:   27 ATTKPLFPAILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQPNLSDQDILTGVCFASAGAGYDDLTSLST-QAIRVSEQPNMFKSYIARLKGIVGDK-KAMEIINNAFVVVSAGPNDFILNYYDIP--SRRLEYPFISGYQDFILKRLENFVRELYSLGVRNVLV 222          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL43_ARATH (GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana GN=At2g31540 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.406e-20
Identity = 68/200 (34.00%), Postives = 100/200 (50.00%), Query Frame = 2
Query:  134 AKAAPQVPCYFIFGDSLVDNGNNNQ-LSSLARANYLPYGIDFPNGPT-GRFSNGKTTVDVIAQLLGFDGYIPPYSAAR--GQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            A   P  P   IFGDS VD GNNN  L ++ RA + PYG+D P+G   GRFSNGK   D+IA  L    +IPP+       QDIL GV +ASA AG  + T       I  S Q   +++ + ++  ++G++ +A   ++     +  G N ++ NY   P    R      S  Q F ++   +  + LY+ G R + V
Sbjct:   27 ATTKPLFPAILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQPNLSDQDILTGVCFASAGAGYDDLTSLST-QAIRVSEQPNMFKSYIARLKGIVGDK-KAMEIINNAFVVVSAGPNDFILNYYEIP--SRRLEYPFISGYQDFILKRLENFVRELYSLGVRNVLV 222          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL42_ARATH (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana GN=At2g30310 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.588e-20
Identity = 74/217 (34.10%), Postives = 107/217 (49.31%), Query Frame = 2
Query:   86 VMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLS-SLARANYLPYGIDFP-NGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAAR--GQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHF-QALYNYGARKICV 721
            V  LLV  N+      A   P  P   IFGDS VD GNNN  S ++ +A +LPYG+D P +   GR+SNGK   DVIA  L     +PP+       QDI+ GV++ASA AG  + +       I  S Q   ++N + ++  ++G++ +A   ++  +  I  G N ++ N+   P    R    P  H    FI   L  F + LY+ G R I V
Sbjct:   13 VATLLVSCNVAA---NATTQPLFPAILIFGDSTVDTGNNNYHSQTIFKAKHLPYGVDLPGHEANGRYSNGKVISDVIASKLNIKELVPPFLQPNISHQDIVTGVSFASAGAGYDDRSSLS-SKAIPVSQQPSMFKNYIARLKGIVGDK-KAMEIINNALVVISAGPNDFILNFYDIP---TRRLEYPTIHGYQEFILKRLDGFVRELYSLGCRNIVV 221          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL41_ARATH (GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana GN=At2g30220 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.588e-20
Identity = 66/196 (33.67%), Postives = 100/196 (51.02%), Query Frame = 2
Query:  146 PQVPCYFIFGDSLVDNGNNNQLS-SLARANYLPYGIDFP-NGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAAR--GQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            P  P   IFGDS  D GNNN  S ++ +AN+LPYG+D P +   GRFSNGK   DVI+  L    ++PP+       QDI+ GV +ASA AG  +ET       I  S Q   ++N + ++  ++G++ +A   ++  +  I  G N ++ N+   P+   R         Q F ++      + LY+ G R I V
Sbjct:   29 PLFPAILIFGDSTADTGNNNYYSQAVFKANHLPYGVDLPGHEANGRFSNGKLISDVISTKLNIKEFVPPFLQPNISDQDIVTGVCFASAGAGYDDETSLS-SKAIPVSQQPSMFKNYIARLKGIVGDK-KAMEIINNALVVISAGPNDFILNFYDIPI--RRLEYPTIYGYQDFVLKRLDGFVRELYSLGCRNILV 220          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL86_ARATH (GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 9.910e-20
Identity = 63/203 (31.03%), Postives = 106/203 (52.22%), Query Frame = 2
Query:  134 AKAAPQ----VPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPN-GPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAAR--GQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            AK+ P+    V    +FGDS VD GNNN + ++ + N+ PYG+DF N  PTGRF NG+   D IA  +G    +PPY        +++ GV++ASA +G    T   + + I    Q++ ++   +++   +G ++    ++   ++ +  G+N ++ NY   P+   R + T  ++ Q F I       Q L+  GARKI V
Sbjct:   35 AKSEPKRKHSVSAILVFGDSTVDPGNNNYIDTVFKCNFPPYGLDFRNKTPTGRFCNGRLVTDFIASYIGVKENVPPYLDPNLGINELISGVSFASAGSGYDPLT-PTITNVIDIPTQLEYFREYKRKLEGKMGKQEM-EKHIEEAMFCVSAGTNDFVINYFTIPI--RRKTFTIEAYQQ-FVISNLKQFIQGLWKEGARKITV 232          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL47_ARATH (GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana GN=At2g40250 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.766e-19
Identity = 65/214 (30.37%), Postives = 108/214 (50.47%), Query Frame = 2
Query:   89 MVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            ++LL L+N+ N    A  +P +   + FGDS VD+GNNN + +L ++N+ PYG  FP+   TGRFS+GK   D I   LG    +P Y   + +  D+L GV++ASA  G+ + T +     I+   Q   ++  + ++ +L+G + +    +   ++ I  G+N  + N     L     S+   S  Q   +       Q LY  GAR+I +
Sbjct:   17 ILLLQLLNLTN----ASPSPPITALYAFGDSTVDSGNNNYIPTLFQSNHPPYGKSFPSKLSTGRFSDGKLATDFIVSSLGLKPTLPAYLNPSVKPVDLLTGVSFASAGGGLDDRTAKS-SLTITMDKQWSYFEEALGKMKSLVG-DSETNRVIKNAVFVISAGTNDMIFNVYDHVL----GSLISVSDYQDSLLTKVEVFVQRLYEAGARRITI 220          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL4_ARATH (GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana GN=At1g20120 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.096e-18
Identity = 64/193 (33.16%), Postives = 100/193 (51.81%), Query Frame = 2
Query:  155 PCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPL---LFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKI 715
            P  F FGDS++D GNN+ + +L +AN+LPYG++FP+  PTGRF NGK   D IA  +G    +P Y       +D+L GV++AS  +G    T   +   I  S Q+  +Q  +++V   +G E +A + +S+ +  +  GS+   N Y    L   L++  + T      +F           LY  GA+KI
Sbjct:   77 PAIFAFGDSILDTGNNDYILTLIKANFLPYGMNFPDKVPTGRFCNGKIPSDFIADYIGVKPVVPAYLRPGLTQEDLLTGVSFASGGSGYDPLTPIVV-SAIPMSKQLTYFQEYIEKVKGFVGKE-KAEHIISKGLAIVVAGSDDLANTYYGEHLEEFLYDIDTYT------SFMASSAASFAMQLYESGAKKI 261          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL5_ARATH (GDSL esterase/lipase At1g23500 OS=Arabidopsis thaliana GN=At1g23500 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.441e-18
Identity = 66/213 (30.99%), Postives = 106/213 (49.77%), Query Frame = 2
Query:   92 VLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPYSAAR--GQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            V L  +     + G+ A   V   F FGDS++D GNNN L++L++ N+ PYG +F  G  TGRF NG+   D+IA+ L     +P Y        D+  GV +AS  +G+ E T R  G  I    QVK+++  + ++  ++ ++ +    +S  +Y I  G+N     Y   P L  + ++   S      +  T +  ++LY  GARK  V
Sbjct:   16 VCLFFVGYAQQFSGSVA---VSALFAFGDSILDTGNNNNLNTLSKCNFFPYGRNFIGGKATGRFGNGRVFSDMIAEGLNVKKLLPAYRDPNLSKNDLPTGVCFASGGSGLDERTARSQG-VIWVPDQVKDFKEYIMKLNGVVRDKRKVNAIISNAVYLISAGNNDLAITY---PTLMAQYTV---STYTDLLVTWTDNLLKSLYAMGARKFAV 218          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: APG_BRANA (Anther-specific proline-rich protein APG (Fragment) OS=Brassica napus GN=APG PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.188e-18
Identity = 64/209 (30.62%), Postives = 98/209 (46.89%), Query Frame = 2
Query:  152 VPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--------SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICVDWSGTNGGPP 751
            +P  F FGDS+ D GNNN L +  + NY PYG+DFP G  TGRFSNG+   D I++ LG    +P Y        +  +  D+L GV++AS  AG   +T  +     +   Q+  +Q+  +++  L+G + +    +S+    +  GSN  +  Y        ++ +       T            LY YGAR+I     G  G PP
Sbjct:  123 IPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTS-ESWKVTTMLDQLTYFQDYKKRMKKLVGKK-KTKKIVSKGAAIVVAGSNDLIYTYFGNGAQHLKNDV---DSFTTMMADSAASFVLQLYGYGARRI-----GVIGTPP 321          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: EXL3_ARATH (GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.438e-18
Identity = 68/231 (29.44%), Postives = 114/231 (49.35%), Query Frame = 2
Query:   80 WVVMVLLVLINIQNYYYGAKAAPQ--VPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNY--LPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICVDWSGTNGGPP 751
            W + +L VL  +       K  P+  +P    FGDS+VD G NN + ++ + ++LPYGI+F +G  TGRF +G+   D++A+ LG    +P Y     + +D+L GV++AS  +G    T + L   IS   Q+  ++  +++V N++G E +    ++  ++ +  GS+   N Y  L A   ++  S T      T            LY YG R++ V      G PP
Sbjct:   16 WKICLLSVLF-LTETITAVKLPPKLIIPAVIAFGDSIVDTGMNNNVKTVVKCDFLPYGINFQSGVATGRFCDGRVPADLLAEELGIKSIVPAYLDPNLKSKDLLTGVSFASGGSGYDPITPK-LVAVISLEDQLSYFEEYIEKVKNIVG-EARKDFIVANSLFLLVAGSDDIANTYYTLRARPEYDVDSYT------TLMSDSASEFVTKLYGYGVRRVAV-----FGAPP 232          
The following BLAST results are available for this feature:
BLAST of DY260146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
GDL44_ARATH3.406e-2034.00GDSL esterase/lipase At2g31550 OS=Arabidopsis thal... [more]
GDL43_ARATH3.406e-2034.00GDSL esterase/lipase At2g31540 OS=Arabidopsis thal... [more]
GDL42_ARATH7.588e-2034.10GDSL esterase/lipase At2g30310 OS=Arabidopsis thal... [more]
GDL41_ARATH7.588e-2033.67GDSL esterase/lipase At2g30220 OS=Arabidopsis thal... [more]
GDL86_ARATH9.910e-2031.03GDSL esterase/lipase At5g45960 OS=Arabidopsis thal... [more]
GDL47_ARATH3.766e-1930.37GDSL esterase/lipase At2g40250 OS=Arabidopsis thal... [more]
GDL4_ARATH1.096e-1833.16GDSL esterase/lipase At1g20120 OS=Arabidopsis thal... [more]
GDL5_ARATH2.441e-1830.99GDSL esterase/lipase At1g23500 OS=Arabidopsis thal... [more]
APG_BRANA3.188e-1830.62Anther-specific proline-rich protein APG (Fragment... [more]
EXL3_ARATH5.438e-1829.44GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP11YH08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260146 ID=DY260146; Name=DY260146; organism=Citrus clementina; type=EST; length=1179bp
TCAATTTTGATCTTTCCTCATCTCATCTGGGTTTTAGAATTTGTTTCCTC
TTTCGGGCTTGATGGATTTAAGAAAATGGTGGGTGGTGATGGTGTTGTTG
GTTTTGATCAATATACAGAATTATTATTATGGGGCTAAAGCAGCGCCTCA
AGTGCCTTGCTACTTCATATTTGGGGATTCATTGGTGGATAACGGGAATA
ATAATCAACTATCTTCATTGGCTAGAGCTAATTATTTGCCTTATGGAATT
GACTTCCCTAATGGTCCTACAGGAAGATTTTCCAATGGCAAAACTACCGT
CGATGTCATTGCCCAACTTCTGGGCTTCGACGGTTACATTCCTCCATATT
CGGCTGCAAGAGGTCAGGATATACTCAGAGGAGTCAATTATGCATCTGCA
GCTGCTGGTATCAGGGAGGAAACTGGTCGACAGCTGGGAGATCGAATCAG
TTTTAGTGGGCAGGTAAAGAATTACCAAAACACGGTTCAGCAAGTAGTGA
ACTTACTAGGAAATGAAGATCAAGCTGCAAATTACCTGAGCCGATGCATA
TACTCAATCGGATTAGGCAGCAACCACTACCTCAACAACTACCTCCCAGC
CCCTCTATTATTCAACCGGTCGTCCATTACACCCCCGAGCCATATGCAGA
CCTTCTTTATTCAAATTACACTCCACCACTTTCAGGCGTTGTACAACTAT
GGGGCAAGGAAAATTTGTGTTGATTGGAGTGGAACAAATGGGGGGCCCCC
CCAATCATTTGGCTCAAAAAATCCCAAAAGGAAAAACTTTGTTGCCAAAG
ATGGAATGACCCAACCTAAATTTCAAAAAAAGGCCCAAAGGGCCTCCGTT
TAAAAATTTAAACACAACAATTCGAAGCCCAATTTTTCTCACATCCAGGT
TTTGGGGTTTTCCCCAGAAATACAACCCACCCCCCCCCCCTATATTTTTT
AAAGATTACAAAATTGGGGGTGCGTGTGGGTTTGAAAAAAAAAAAAGGGG
AAAATTTATTCTTTTTCCTCCCTCCTCAAAAACCACCCCTCCCAACAAAG
AGAAGGGGAAAATTTGTGTTTTTGGAGGGTTCTTTTCATTCCTATATGGA
AAACGGCGTATAAAAAAATAAAACTCTCTCCACCCCAAAATTTTTATTCT
CTTCTTTTGATATATATCTCTTATTCTAA
back to top