DY260146

Overview
NameDY260146
Unique NameDY260146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1179
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1432 contig Ccv1_Contig1432:1..1179. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: APG_ARATH (Anter-specific proline-rich protein APG OS=Arabidopsis thaliana GN=APG PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.211e-17
Identity = 65/212 (30.66%), Postives = 99/212 (46.70%), Query Frame = 2
Query:  152 VPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFP-NGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQ--DILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNE---------DQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICVDWSGTNGGPP 751
            +P  F FGDS+ D GNNN L +  ++NY PYG+DF     TGRFSNG    D +A+ +G    +P Y   + Q  D+L GV++AS  AG    T  +  + I    Q+  +Q+ +++V  L+  E         ++    +S+ +  +  GSN  +  Y  +     ++ I       T            LY YGAR+I     G  G PP
Sbjct:  202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVKEIVPAYLDPKIQPNDLLTGVSFASGGAGYNPTTS-EAANAIPMLDQLTYFQDYIEKVNRLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITYFGSGAQRLKNDI---DSYTTIIADSAASFVLQLYGYGARRI-----GVIGTPP 404          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GLIP6_ARATH (GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=GLIP6 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.012e-17
Identity = 81/304 (26.64%), Postives = 136/304 (44.74%), Query Frame = 2
Query:   83 VVMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNN-QLSSLARANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIP----PYSAARG-QDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICVDWSGTNG-GPPQSFGSKNPKRKNFVAKDGMTQPKFQKKAQRASV*KFKHNNSKPNFSHIQVLGFSPEIQPTPPPYIF*RLQNWGC 973
            ++M LL+LI+       AK++  VP  F FGDS+ D GNN+   +  A+A++ PYG  F + PTGRF+NG+T  D I++ +G     P          G  +   G+N+ASA +G+  +T + +G        V   Q  +QQ   L+       + +   ++ +  GSN   N +LP    F   +++P +++     Q+       +Y  GAR+I     G  G  P ++     P  K F   + M +   ++     ++   K+  +   F    V G +   Q  P  Y F  + N  C
Sbjct:    9 LLMCLLLLISPVVL---AKSSSTVPAIFTFGDSIFDAGNNHYNKNCTAQADFPPYGSSFFHRPTGRFTNGRTVADFISEFVGLPLQKPFLELQIQILNGTSNFSNGINFASAGSGLLLDTNKFMG--------VTPIQTQLQQFQTLVEQNLIEKSIIQESLFLLETGSNDIFNYFLP----FRAPTLSPDAYVNAMLDQVN-KTIDQIYKLGARRIAFFSLGPVGCVPARAMLPNAPTNKCFGKMNVMAKMYNKRLEDIVNIIPTKYPGAIAVFG--AVYGITHRFQTYPARYGFSDVSNACC 294          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GLIP5_ARATH (GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 7.852e-17
Identity = 65/190 (34.21%), Postives = 98/190 (51.58%), Query Frame = 2
Query:  152 VPCYFIFGDSLVDNGNNNQLSS--LARANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPPY-SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARK 712
            V   F+FGDS +D GNNN +++  L +AN+ PYG  F   PTGRFS+G+   D IA+       IPP+      Q  L GVN+ASA AG   ET +  G  I+   Q+ +Y+  V+++      ++++   +SR +Y I +GSN Y + +L    L     I+   H+      +T      +Y  G RK
Sbjct:   46 VTALFLFGDSFLDAGNNNYINTTTLDQANFPPYGQTFFGLPTGRFSDGRLISDFIAEYANLP-LIPPFLEPGNSQKKLYGVNFASAGAGALVETFQ--GSVINLRTQLDHYKK-VERLWRTNFGKEESKKRISRAVYLISIGSNDYSSIFLTNQSL----PISMSQHVDIVIGNLTT-FIHEIYKIGGRK 226          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: EXL4_ARATH (GDSL esterase/lipase EXL4 OS=Arabidopsis thaliana GN=EXL4 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.254e-14
Identity = 61/214 (28.50%), Postives = 97/214 (45.33%), Query Frame = 2
Query:   92 VLLVLINIQNYYYGAKAAP-QVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFP-NGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAA--RGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            + LVL    +Y+    A     P    FGDS++D GNNN L +  + N  PYG  F     TGRF NG+   D++A+ LG    +P Y        D+  GV +AS  AG+   T + L   ++   QV +++  ++++    G   +A++ +S  +  +  G+N    +Y   P    R     P+   T          + LY+ GARK  V
Sbjct:    5 ITLVLTLFSSYFISTDAVNGSFPALLAFGDSILDTGNNNFLLTFMKGNIWPYGRSFSMRRATGRFGNGRVFSDIVAEGLGIKKILPAYRKLFNSPSDLRTGVCFASGGAGVDPVTSKLL-RVLTPKDQVNDFKGYIRKLKATAG-PSRASSIVSNAVILVSQGNNDIGISYFGTPTAAFRG--LTPNRYTTKLAGWNKQFMKELYDQGARKFAV 214          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL85_ARATH (GDSL esterase/lipase At5g45950 OS=Arabidopsis thaliana GN=At5g45950 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.793e-14
Identity = 59/197 (29.95%), Postives = 98/197 (49.75%), Query Frame = 2
Query:  140 AAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPN-GPTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            A   V    +FGDS VD GNNN + +  + N+ PYG +F N  PTGR  +G    D IA+ +G+   IP +   +    D+ RG ++ASA +G  + T   + +  SF+ Q   + +    +  L+G   ++A  ++  I+ + +GSN +L NYL   + F R           F     L+  + L+  GA+++ V
Sbjct:   34 AKHNVTSILVFGDSSVDPGNNNFIKTEMKGNFPPYGENFINHKPTGRLCDGLLAPDYIAEAMGYPP-IPAFLDPSLTQADLTRGASFASAGSGYDDLTA-NISNVWSFTTQANYFLHYKIHLTKLVG-PLESAKMINNAIFLMSMGSNDFLQNYL---VDFTRQKQFTVEQYIEFLSHRMLYDAKMLHRLGAKRLVV 224          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: EXL5_ARATH (GDSL esterase/lipase EXL5 OS=Arabidopsis thaliana GN=EXL5 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.061e-13
Identity = 64/229 (27.95%), Postives = 104/229 (45.41%), Query Frame = 2
Query:   89 MVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVI---------------AQLLGFDGYIPPYSA--ARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICV 721
            M++L L +I      A      P    FGDS+VD GNNN L +L + NY PYG +F +  PTGRF NG+   DV+               A+ LG    +P Y        D+  GV++AS  AG+   T + L   +S + QVK+++   +++  ++G   +A   ++  +  +  G+N     Y    +      +  P    +  +       + LY++GARK  V
Sbjct:    6 MLVLALFSIYFLSIEAVRNESFPALLAFGDSMVDTGNNNYLLTLMKGNYWPYGWNFDSKIPTGRFGNGRVFSDVVGIILKSSLQCFFVISAEGLGIKRIVPAYRKLYIAPSDLKTGVSFASGGAGVDPVTSKLL-RVLSPADQVKDFKGYKRKLKGVVG-RSKAKKIVANSVILVSEGNNDIGITY---AIHDAGMRLMTPKVYTSKLVGWNKKFIKDLYDHGARKFAV 229          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GLIP2_ARATH (GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=GLIP2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.088e-13
Identity = 62/187 (33.16%), Postives = 90/187 (48.13%), Query Frame = 2
Query:  164 FIFGDSLVDNGNNNQLSSLA--RANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPPY-SAARGQD-ILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARK 712
            F+FGDS+ D GNNN + +L   R+NY PYG      PTGR S+G+T  D IA+       IP Y   + G++    GV++ASA AG     G   G  I+   Q+ N++   + + + LG E Q    +SR +Y   +G N Y   +     +F  S   P      F +  T    + +Y  G RK
Sbjct:   41 FVFGDSVFDAGNNNYIDTLPSFRSNYWPYGQTTFKFPTGRVSDGRTIPDFIAEYAWLP-LIPAYLQPSNGKNQFPYGVSFASAGAGAL--VGTFPGMVINLKSQLNNFKKVEKLLRSTLG-EAQGKMVISRAVYLFHIGVNDYQYPFSTNSSIFQSS---PQEIYVDFVVGNTTAVIKEVYKIGGRK 220          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GLIP1_ARATH (GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.088e-13
Identity = 61/198 (30.81%), Postives = 92/198 (46.46%), Query Frame = 2
Query:  164 FIFGDSLVDNGNNNQLSSLA--RANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARG-QDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARKICVDWSGTNGGP 748
            F+FGDS+ D GNNN + +L+  R+NY PYG      PTGR S+G+   D IA+        P      G      GVN+AS  AG     G   G  I+   Q+ N++   + + + LG + +    +SR +Y   +G N Y   +     LF   SI+   ++  + +      F+ +YN G RK  +     N GP
Sbjct:   39 FVFGDSVFDAGNNNYIDTLSSVRSNYWPYGQTTFKSPTGRVSDGRLIPDFIAEYAWLPLIPPNLQPFNGNSQFAYGVNFASGGAGAL--VGTFSGLVINLRTQLNNFKKVEEMLRSKLG-DAEGKRVISRAVYLFHIGLNDYQYPFTTNSSLF--QSISNEKYVD-YVVGNMTDVFKEVYNLGGRKFGI----LNTGP 226          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GRIP4_ARATH (GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 6.879e-13
Identity = 59/189 (31.22%), Postives = 88/189 (46.56%), Query Frame = 2
Query:  164 FIFGDSLVDNGNNNQLSSLA--RANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPP--YSAARGQDILRGVNYASAAAGIREET--GRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHYLNNYLPAPLLFNRSSITPPSHMQTFFIQITLHHFQALYNYGARK 712
            F FGDSL + GNNN   S++  R+N+ PYG      PTGR S+G+  +D IA+       IPP          +  G+N+A+ AAG+   T  G           Q+ N++N  + + + LG + +A   +S+ +Y   +G+N Y   +      F   S T       F I  T    + LY  GARK
Sbjct:   39 FAFGDSLFEAGNNNYFDSISSFRSNFWPYGKTTFKFPTGRVSDGRIMIDFIAEYAWLP-LIPPNLQPGYSNSQLTYGLNFATTAAGVFAGTFPGSVTNLSKDLGTQLNNFKNVEKTLRSNLG-DAEARRVISKAVYLFHIGANDYQYPFFANTSTF---SNTTKERFIDFVIGNTTTVIEELYKLGARK 222          
BLAST of DY260146 vs. ExPASy Swiss-Prot
Match: GDL16_ARATH (GDSL esterase/lipase At1g31550 OS=Arabidopsis thaliana GN=At1g31550 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.001e-12
Identity = 50/146 (34.25%), Postives = 75/146 (51.37%), Query Frame = 2
Query:  170 FGDSLVDNGNNNQLS---SLARANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQDILRGVNYASAAA-----GIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIG-LGSNHY 580
            FGDS+ D GN   LS   +L  + + PYG  F + PTGRFS+G+  +D IA+ LG   Y+PPY  +   +  +GVN+A A+A        EE G       S   Q+K ++   Q + NL G      + +   +  +G +G+N Y
Sbjct:   40 FGDSIADTGNLLGLSDHNNLPMSAFPPYGETFFHHPTGRFSDGRLIIDFIAEFLGLP-YVPPYFGSTNGNFEKGVNFAVASATALESSFLEEKGYHCPHNFSLGVQLKIFK---QSLPNLCGLPSDCRDMIGNALILMGEIGANDY 181          
The following BLAST results are available for this feature:
BLAST of DY260146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
APG_ARATH1.211e-1730.66Anter-specific proline-rich protein APG OS=Arabido... [more]
GLIP6_ARATH6.012e-1726.64GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=... [more]
GLIP5_ARATH7.852e-1734.21GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=... [more]
EXL4_ARATH1.254e-1428.50GDSL esterase/lipase EXL4 OS=Arabidopsis thaliana ... [more]
GDL85_ARATH2.793e-1429.95GDSL esterase/lipase At5g45950 OS=Arabidopsis thal... [more]
EXL5_ARATH1.061e-1327.95GDSL esterase/lipase EXL5 OS=Arabidopsis thaliana ... [more]
GLIP2_ARATH3.088e-1333.16GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=... [more]
GLIP1_ARATH3.088e-1330.81GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=... [more]
GRIP4_ARATH6.879e-1331.22GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=... [more]
GDL16_ARATH2.001e-1234.25GDSL esterase/lipase At1g31550 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260146 ID=DY260146; Name=DY260146; organism=Citrus clementina; type=EST; length=1179bp
TCAATTTTGATCTTTCCTCATCTCATCTGGGTTTTAGAATTTGTTTCCTC
TTTCGGGCTTGATGGATTTAAGAAAATGGTGGGTGGTGATGGTGTTGTTG
GTTTTGATCAATATACAGAATTATTATTATGGGGCTAAAGCAGCGCCTCA
AGTGCCTTGCTACTTCATATTTGGGGATTCATTGGTGGATAACGGGAATA
ATAATCAACTATCTTCATTGGCTAGAGCTAATTATTTGCCTTATGGAATT
GACTTCCCTAATGGTCCTACAGGAAGATTTTCCAATGGCAAAACTACCGT
CGATGTCATTGCCCAACTTCTGGGCTTCGACGGTTACATTCCTCCATATT
CGGCTGCAAGAGGTCAGGATATACTCAGAGGAGTCAATTATGCATCTGCA
GCTGCTGGTATCAGGGAGGAAACTGGTCGACAGCTGGGAGATCGAATCAG
TTTTAGTGGGCAGGTAAAGAATTACCAAAACACGGTTCAGCAAGTAGTGA
ACTTACTAGGAAATGAAGATCAAGCTGCAAATTACCTGAGCCGATGCATA
TACTCAATCGGATTAGGCAGCAACCACTACCTCAACAACTACCTCCCAGC
CCCTCTATTATTCAACCGGTCGTCCATTACACCCCCGAGCCATATGCAGA
CCTTCTTTATTCAAATTACACTCCACCACTTTCAGGCGTTGTACAACTAT
GGGGCAAGGAAAATTTGTGTTGATTGGAGTGGAACAAATGGGGGGCCCCC
CCAATCATTTGGCTCAAAAAATCCCAAAAGGAAAAACTTTGTTGCCAAAG
ATGGAATGACCCAACCTAAATTTCAAAAAAAGGCCCAAAGGGCCTCCGTT
TAAAAATTTAAACACAACAATTCGAAGCCCAATTTTTCTCACATCCAGGT
TTTGGGGTTTTCCCCAGAAATACAACCCACCCCCCCCCCCTATATTTTTT
AAAGATTACAAAATTGGGGGTGCGTGTGGGTTTGAAAAAAAAAAAAGGGG
AAAATTTATTCTTTTTCCTCCCTCCTCAAAAACCACCCCTCCCAACAAAG
AGAAGGGGAAAATTTGTGTTTTTGGAGGGTTCTTTTCATTCCTATATGGA
AAACGGCGTATAAAAAAATAAAACTCTCTCCACCCCAAAATTTTTATTCT
CTTCTTTTGATATATATCTCTTATTCTAA
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