DY260148

Overview
NameDY260148
Unique NameDY260148
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1112
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260148 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.843e-36
Identity = 97/256 (37.89%), Postives = 134/256 (52.34%), Query Frame = 3
Query:    6 SQA*LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGR--LYDFNNTGKPDPTLDATFLQQLRKLCPQG-GNGGVLANFDVTTPDVFDNKYFSHLRGRQSPLQSDQKL 764
            S A LS +FY+ +CP     + + ++ A SSD  +   L+RL FHDCFV GCD S+L+    T  S+    P N S  GF VI+++K  +E  CP  VSCADIL +AA  +V   GGP   +P GRRD R +  A    N+     T+D++ + F + GL+   DLV LSGAHT G A C  F  R  L    N    D +LD ++ Q L   C         + + D  T   FDN+Y+ +L   +   Q+D  L
Sbjct:   27 SVAELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSD----PGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVH-DLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSLDPTTTVVDNDPETSSTFDNQYYKNLLAHKGLFQTDSAL 277          
BLAST of DY260148 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.406e-36
Identity = 102/258 (39.53%), Postives = 140/258 (54.26%), Query Frame = 3
Query:   18 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDS-EKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAA-ERSVALSGGP-SWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQG--GNGGVLANFDVTTPDVFDNKYFSHLRGRQSPLQSDQKLFSTP 776
            L   +Y  TCP     ++  ++KA + +   GA++IR+ FHDCFV+GCDAS+LLD T    + EK AAPNN S RGFE+ID +K A+E ACP VVSCADI+  AA + S  LS G  S+ +P GR D   +N + + + L  P   L +L SSF   G++ + DLV LSGAHT GR+ C  F     D  +   P           LR  CP     +       DV TP+  D +Y+ ++        SD  L ++P
Sbjct:   35 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLE-DLVVLSGAHTVGRSHCSSFVSDRLDVPSDINP------ALAAFLRTRCPPNTTTSDDPTVMQDVVTPNAMDIQYYKNVLSHTVLFTSDAALLTSP 285          
BLAST of DY260148 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 4.538e-35
Identity = 87/249 (34.94%), Postives = 131/249 (52.61%), Query Frame = 3
Query:   18 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSHLRGRQSPLQSDQKL 764
            L   FY  TCP   + +  V+   +  +  + A+L+R+ FHDC V GCDAS+L+D T    SEK +   N   RGFE+ID  K  +E  CP+ VSCADI+TIA   S+AL+GGP + V  GRRD   +N   ++  L GP  ++     +F+++G N    +  + G HT G A C  F+ R+         DP +D+    +L+K C    +  V    D  TP   DN+ +  +  +++ L+ D  L
Sbjct:   22 LRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPTTERPSEK-SVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNP--SDVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRI--------KDPKMDSKLRAKLKKSCRGPNDPSVF--MDQNTPFRVDNEIYRQMIQQRAILRIDDNL 257          
BLAST of DY260148 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 8.559e-34
Identity = 89/260 (34.23%), Postives = 132/260 (50.77%), Query Frame = 3
Query:   18 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARG--FEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSHLRGRQSPLQSDQKLFSTPGADP 788
            L   +Y  TCP+    + + +           A  +RL FHDCF++GCDAS+L+ +TN+ +  +     N+S  G  F+++  +K A+E +CP VVSCADIL  A    V + GGP + V LGR+D   +       N+P    T+ ++   F+  G + + ++VALSGAHT G + C+ F  RLY      + D  ++  F   L+ LC        +A F DV TP  FDN YF +L+     L SD  L       P
Sbjct:   33 LRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLI-ATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLR-EMVALSGAHTIGFSHCKEFSDRLYG----SRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKP 286          
BLAST of DY260148 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 1.236e-32
Identity = 90/262 (34.35%), Postives = 131/262 (50.00%), Query Frame = 3
Query:   18 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDS-RTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD----VFDNKYFSHLRGRQSPLQSDQKLFSTPGADP 788
            LS S+Y  TCP V   +   L   F  D    A+L+RL FHDC V GCDASILL+        +  +  N   R  +++ ++K ++E  CP+ VSC+D++ +AA  +VAL+GGP  +VPLGR+DS  T ++ +A+  LP     +D   S F N G+  + + VA+ GAHT G   C     R   F+N       +D  F   LR  CP+       A       D    +FD  Y+      +  L+ D ++    GADP
Sbjct:   38 LSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIE-ESVAIMGAHTIGVTHCNNVLSR---FDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQTSVIFDTAYYDDAIAGRGNLRIDSEI----GADP 291          
BLAST of DY260148 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 7.498e-30
Identity = 87/276 (31.52%), Postives = 130/276 (47.10%), Query Frame = 3
Query:   18 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF---DVTTPDVFDNKYFSHLRGRQSPLQSDQKLFSTPGADPAAIVRTLGGTQMLFLK 836
            L  +FY  TCP   + + + +K  +        S +R  FHDC V+ CDAS+LLDST     EK     +   R F  I+ +K A+ER CP VVSC+DIL ++A   +   GGP   +  GRRD   +   +    LP   +++  +   F+++G+ D   LVAL G+H+ GR  C     RLY      + DP+L+   +  +   CP          +   D  TP V DN Y+ ++   +  L  D +L       P  IV+ +   Q  F K
Sbjct:   31 LMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEK-EHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGI-DTPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRP--IVKKMAKDQAYFFK 297          
BLAST of DY260148 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 9.793e-30
Identity = 83/261 (31.80%), Postives = 129/261 (49.43%), Query Frame = 3
Query:   18 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPS-WAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ---GGNGGVLANFDVTTPDVFDNKYFSHLRGRQSPLQSDQKLFSTPGADP 788
            L  ++Y  +CP     I   ++  +        S +R  FHDC V  CDAS+LL++   ++SE+  +  +   R F+ +  +K A+E+ CP  VSCADI+ ++A   + +  GP    +  GRRDSR +        +P   D+L  + S+F ++G+ D    VAL GAH+ GR  C     RLY        DPTLD ++   L+K CP      N  + +  D  TP V DN Y+ ++   +  L  D +L + P   P
Sbjct:   30 LEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQ-KSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGI-DVEATVALLGAHSVGRVHCVNLVHRLYP-----TIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAP 283          
BLAST of DY260148 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 6.347e-29
Identity = 74/173 (42.77%), Postives = 101/173 (58.38%), Query Frame = 3
Query:   18 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVERAC-PRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRT-ANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHT 527
            LS  FY  +CP   + +   ++ A   D+ + A L+RLHFHDCFV GCDAS+LLD + T   E+ A PN       F+ I+++   + + C   VVSC+D+L +AA  SV +SGGPS+ VPLGRRDS + A +      LP P   +  L +    + L D  DLVALSG HT
Sbjct:   41 LSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINL-DATDLVALSGGHT 212          
BLAST of DY260148 vs. ExPASy Swiss-Prot
Match: PERX_WHEAT (Peroxidase (Fragment) OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.916e-17
Identity = 45/78 (57.69%), Postives = 55/78 (70.51%), Query Frame = 3
Query:  237 RGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSF 470
            RGF VID++K  +E  C + VSCADILT+AA  SV   GGPSW VPLGRRDS  AN A AN +LPG   +  EL+++F
Sbjct:    3 RGFGVIDSIKTQIEAICNQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANEAEANSDLPGFNSSRSELEAAF 80          
BLAST of DY260148 vs. ExPASy Swiss-Prot
Match: PERX_LUPPO (Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.162e-14
Identity = 55/161 (34.16%), Postives = 73/161 (45.34%), Query Frame = 3
Query:  429 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGV-LANFDVTTPDVFDNKYFSHLRGRQSPLQSDQKLFSTPGADPAAIVRTLGGTQMLFLKTL*PPMIRKGNFEPPGREIKGEIR 908
            PGP   L  L + F   GL    DL  LSG HT G+++CQFF+ R+Y+       D  +D  F    +  CP    G   LA  D  TP+ FDN Y+  L   +  L SDQ LF+  G     +VRT     + F       +++     P    I GEIR
Sbjct:    2 PGPSSDLTTLTTKFAAKGLTPS-DLTVLSGGHTIGQSECQFFKTRIYN-------DTNIDTNFATSRQANCPFSAGGETNLAPLDSLTPNRFDNNYYKDLVSNRGLLHSDQVLFN--GGSQDTLVRTYSTNNVKFFSDFAAAIVKMSKISPL-TGIAGEIR 151          
The following BLAST results are available for this feature:
BLAST of DY260148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER18_ARATH1.843e-3637.89Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER2_MAIZE2.406e-3639.53Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER8_ARATH4.538e-3534.94Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER65_ARATH8.559e-3434.23Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER29_ARATH1.236e-3234.35Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER42_ARATH7.498e-3031.52Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH9.793e-3031.80Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER1_SORBI6.347e-2942.77Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PERX_WHEAT1.916e-1757.69Peroxidase (Fragment) OS=Triticum aestivum PE=3 SV... [more]
PERX_LUPPO1.162e-1434.16Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260148 ID=DY260148; Name=DY260148; organism=Citrus clementina; type=EST; length=1112bp
CACCATCTCAAGCTTAACTTTCTCCATCTTTTTATTCTTCCACATGCCCT
AATGTATTGAACACTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCCGA
TATCCGGATCGGTGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTG
TTGATGGGTGTGATGCATCGATTTTGCTGGACAGCACTAACACCATAGAC
AGCGAGAAATTTGCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGT
TATTGATAACATGAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTT
CCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCA
GGGGGTCCGTCATGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGC
AAACAGAGCTCTTGCAAATCAGAATCTTCCAGGACCATTTGATACTCTTG
ATGAGCTCAAATCTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGAT
CTTGTTGCACTCTCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATT
TTTCAGGGGCAGATTATACGATTTTAACAACACTGGCAAGCCAGACCCAA
CCCTAGACGCAACCTTCTTACAACAACTGAGGAAACTATGCCCACAAGGT
GGAAACGGCGGCGTTCTTGCTAATTTTGATGTCACGACACCTGATGTTTT
CGACAACAAATACTTCTCCCATCTTAGAGGCCGCCAAAGCCCTCTGCAGA
GTGATCAAAAGTTATTTTCAACTCCTGGGGCCGATCCCGCCGCCATTGTC
AGGACTTTGGGAGGAACCCAAATGCTTTTCTTAAAAACTTTGTGACCCCC
CATGATAAGAAAGGGAAATTTTGAACCCCCCGGCCGGGAAATCAAGGGGG
AAATTAGAATTGAACTGGCGGAGGGGCAATGGAAAACCGTTAATATTGGC
AACCAGATCCCCCATCCCCCAAGGGGGGATTTGGGCCCCTCCCTTTCAAA
ATAACCAGCTTTGCACCATAATGCCCCAAAAATTTTTTGGGGCTTAAAAA
ACCCCCAATTTTAAACCCGGACCGTTTTTTTCCCCGGAAAACATGGTTAT
GTTACCTTTTTC
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