DY260151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PPR94_ARATH (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.263e-13 Identity = 62/228 (27.19%), Postives = 100/228 (43.86%), Query Frame = 3 Query: 75 FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFS-----SNAHALVEELLQQGCNLDQMAYSPLIRGLCKEK 743 F +LI + A+ LVD+MV+ G + L + +V GLC R I LL+KM K + D N +I CK + D +F M +G+ + +Y++L+ LC G D RK P + +L++ + L E+ +L++ M+ RS IF + GF A + E ++ + C + + YS LI+G CK K Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC-KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI-----KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.261e-13 Identity = 57/243 (23.46%), Postives = 111/243 (45.68%), Query Frame = 3 Query: 15 DRDEYERKLSKIIEDSMIPN---FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLC 734 D D+ ++++ ++P+ +NS+I + + A+ +++ MV+ G +++++ G C+S K G L+KM + D + +LL+ CK G + +KIFD M +RGL E +Y TLL KG + ++H D+ P L+ + + +++ +F M + + LC +G +A E+++ +G + + Y+ LI GLC Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS-GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 452
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.261e-13 Identity = 56/224 (25.00%), Postives = 104/224 (46.43%), Query Frame = 3 Query: 66 IPNFNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCK 737 + +N+LI + L+ M G E +L ++ ++ GLC +K + +L +M + LD+ + N LI+ CK+G + ML+ GLT +YT+L+ S+CK G + F D + R P +LV+ K + E+ ++ M + + CVTG +A A++E++ ++G + D ++YS ++ G C+ Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE-GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PP106_ARATH (Pentatricopeptide repeat-containing protein At1g64582, mitochondrial OS=Arabidopsis thaliana GN=At1g64582 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.566e-13 Identity = 63/268 (23.51%), Postives = 117/268 (43.66%), Query Frame = 3 Query: 75 FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDI-----------------------CY--------------IFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCK----EKSFQL 755 +N+LI + G L AL L++EM + G + ++ L+ GLC S A L + M + N D + LI K+G + + ++++ M+Q + N +Y +++ LC G + D +D+ ++ P + +L+ C +++ E ++LF+ M SC +DI C+ I L LCV G +A +++ + + +AY+ +I GLCK EK+++L Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP-DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM--SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWEL 443
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.240e-12 Identity = 66/271 (24.35%), Postives = 110/271 (40.59%), Query Frame = 3 Query: 75 FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFS-----SNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKSFQLPLKCWTPCGIKNWAPCLDVFCFFIPPLFPTGRTEKAVRL 872 FN+LI + A+ L+D MV G + L + +V GLC R I LL+KM K + D +I A C V D +F M +G+ +Y +L+ LC G D RK P + +L++ + L E+ +L++ M+ RS IF + GF A + E ++ + C + + Y+ LI+G CK K + ++ + + + I LF G + A ++ Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC-KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI-----KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PP325_ARATH (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.240e-12 Identity = 77/325 (23.69%), Postives = 134/325 (41.23%), Query Frame = 3 Query: 21 DEYERKLSKIIEDSMIPN---FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKG-------FIKDL---------------------HAFWDIAQN-------RKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKSFQLPLKCWTPCGIKNWAPCLDVFCFFIPPLFPTGRTEKAVRLRRD 881 +E + SK+ E + PN FN++I + G A + ++MV G E +L +S LVKGL ++ I +L++M K + N LI + + G + +I D M+ +GL++ + +Y TL+ CK G +K++ H +D A R PG +L+ LC ++L+L+ L + + L LC G A + +E+L +GC +D+++Y+ LI G C +K + P + I LF + E+A++ D Sbjct: 290 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAK-RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 613
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.240e-12 Identity = 63/236 (26.69%), Postives = 106/236 (44.92%), Query Frame = 3 Query: 66 IPNFNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVS--CPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCK----EKSFQL 755 + +N LI M+ G L A L D M + G ++ + +V LC S+ +AC + E+M D+ + LI K G V D K+++ ML + YT+L+ + G +D H + N+ P L+ + ++C+ ++ +FE + P RS I + L GF++ + L + +QGC LD AY+ +I G CK K++QL Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA-MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS--YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PPR9_ARATH (Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.619e-12 Identity = 50/226 (22.12%), Postives = 97/226 (42.92%), Query Frame = 3 Query: 66 IPNFNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEK 743 I +N++IK G + A+ + +M G E + +++ C + S +C L ++M + ++ + +L+I CK+G + +G +F+ M+++G YT L+ K G ++D + + P + +V LC ++E+L F + S ++ L G A L EE+ ++GC D Y+ LI K + Sbjct: 257 IVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQA-CYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHR 481
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PP389_ARATH (Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.619e-12 Identity = 66/286 (23.08%), Postives = 125/286 (43.71%), Query Frame = 3 Query: 36 KLSKIIEDSMIPNFNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICY-IFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKSFQLPLKCWTP---CGIKNWAPCLDVFCFFIPPLFPTGRTEKAVRLRRD 881 K+ K+ + I F SL+ + AL + D+MV G + ++ +++ ++ GLC S+ + LL +M K D + N LI C G D ++ M +R + + ++ L+ + K+G + + F++ R P + L+ LC L E+ ++F M VS C + Y I + C + + L E+ Q+G + + Y+ LI+G C+ + + + CG+ P + + + L G+ EKA+ + D Sbjct: 141 KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK-QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM-VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH---PNIITYNVLLHGLCDNGKIEKALVILAD 421
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.762e-12 Identity = 64/241 (26.56%), Postives = 106/241 (43.98%), Query Frame = 3 Query: 33 RKLSKIIEDSMIPN---FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKS 746 R LS +IE + P+ F++LI G L A L DEMV+ + S+ +S+L+ G C + + E M D + N LI+ CK V +G ++F M QRGL +Y L+ L + G + + P + +L++ LC L++++ +FE + S I +E +C G + L L +G D +AY+ +I G C++ S Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM-HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551 HSP 2 Score: 68.1662 bits (165), Expect = 8.886e-11 Identity = 65/272 (23.90%), Postives = 112/272 (41.18%), Query Frame = 3 Query: 75 FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESL--NLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICY-IFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKSFQLPLKCWTPCGIKNWAPCLDVFCFFIPPLFPTGRTEKAVRLRRD 881 FN+LI + A+ L+D MV G + L + +V GLC R LL KM + KL+ L N +I CK + D +F M +G+ +Y++L+ LC G D RK P + +L++ + L E+ +L++ M V S + Y + C+ A + E ++ + C D + Y+ LI+G CK K + ++ + + + I LF G + A + ++ Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC-KRGDTDLAFNLLNKMEQ--GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM-VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456 The following BLAST results are available for this feature:
BLAST of DY260151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260151 ID=DY260151; Name=DY260151; organism=Citrus clementina; type=EST; length=1011bpback to top |