DY260170

Overview
NameDY260170
Unique NameDY260170
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1049
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 8.901e-34
Identity = 82/192 (42.71%), Postives = 112/192 (58.33%), Query Frame = 3
Query:   45 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKP-MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            MA +K++GS  S    R  A L E   EYE+VP+D   GEHK    L+ NPFGQVP L+ GD  L+ESRAI +Y+ ++      +L   G  K  A + VW EVE+ Q+ P  + + ++ + +P MFG   D   VEEN  KL K+L+VYEARL++ KYLA D  ++ DL H+     L  TP   + DA P
Sbjct:    1 MAPMKLYGSTLSWNVTRCVAVLEEAGAEYEIVPLDFSKGEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRK---NKPELLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYP 189          

HSP 2 Score: 30.4166 bits (67), Expect = 8.901e-34
Identity = 12/24 (50.00%), Postives = 17/24 (70.83%), Query Frame = 1
Query:  610 PHVTAWAADITSRPAWAKVLALLK 681
            PHV AW  D+ +RP+  KV +L+K
Sbjct:  189 PHVKAWWTDLMARPSSQKVASLMK 212          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 136.346 bits (342), Expect = 1.510e-33
Identity = 80/191 (41.88%), Postives = 112/191 (58.64%), Query Frame = 3
Query:   45 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            MA +K++G+V S    R   +L E   +YE+VP++    EHK    L  NPFGQVP L+ GD  LFESRAI +Y A++      +L   G  +  A + VW EVEA Q+    + + ++++  PM G TTD   V+EN  KL K+L+VYEARL++ KYLA D  +L DL+H+     L  TP   + DA P
Sbjct:    1 MAPMKLYGAVMSWNLTRCATALEEAGSDYEIVPINFATAEHKSPEHLVRNPFGQVPALQDGDLYLFESRAICKYAARK---NKPELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYP 188          

HSP 2 Score: 28.8758 bits (63), Expect = 1.510e-33
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 1
Query:  610 PHVTAWAADITSRPAWAKVLALLK 681
            PHV AW + +  RP+  KV AL+K
Sbjct:  188 PHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 2.561e-33
Identity = 82/192 (42.71%), Postives = 108/192 (56.25%), Query Frame = 3
Query:   45 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKP-MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            M  +KV G   ST   RV   L E   EYE+V VD    EHK    L  NPFGQ+P  + GD  LFESRAI +YI +++  +   L   G  +  A + VW EVE  Q++   S + +E +  P M G+ T+   V+E+  KL K+L+VYEARLSQS YLA D  +  DL+H P     +GTP   LFD+ P
Sbjct:    1 MTPVKVFGPAQSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYP 192          

HSP 2 Score: 23.8682 bits (50), Expect = 2.561e-33
Identity = 9/23 (39.13%), Postives = 15/23 (65.22%), Query Frame = 1
Query:  610 PHVTAWAADITSRPAWAKVLALL 678
            PHV AW   + +RP+  K+ A++
Sbjct:  192 PHVKAWWERLMARPSVKKLAAVM 214          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 9.599e-33
Identity = 73/183 (39.89%), Postives = 116/183 (63.39%), Query Frame = 3
Query:   54 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK 593
            + ++  +F+++ +R   +L EK + +E V VD+  GE ++  +L++ PFG++PVL  GD K+FESRAI +YIA+++  +G  L   GK I     +  W +VEA  + PP   L   +V+ P+ G   D   ++E+E KLA++LDVYEA+LS+++YLA D  +L DL HLP    L+G P+ K
Sbjct:    3 LTIYAPLFASS-KRAVVTLVEKGVSFETVNVDLMKGEQRQPEYLAIQPFGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGPDLL--GKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVG-PIGK 181          

HSP 2 Score: 26.1794 bits (56), Expect = 9.599e-33
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  613 HVTAWAADITSRPAWAKVLA 672
            HV+AW   I+SR AW +V A
Sbjct:  190 HVSAWWDKISSRAAWKEVSA 209          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.285e-31
Identity = 75/177 (42.37%), Postives = 103/177 (58.19%), Query Frame = 3
Query:   54 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQL---TCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLL 575
            +KV+G + +   QRV     EK++E+E++ VD+   E KK   L   PFGQVP +E G  KLFESRAI +Y A ++ D+GT L   T  G+ I     W EVE   F   +  L   +V+KP  G   D A VEE + K  K+LDVYE RL+ ++YL  D FTL DL H+P +  ++
Sbjct:    3 VKVYGQIKAANPQRVLLCFLEKDIEFEVIHVDLDKLEQKKPQHLLRQPFGQVPAIEDGYLKLFESRAIARYYATKYADQGTDLLGKTLEGRAIVD--QWVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIM 177          

HSP 2 Score: 24.6386 bits (52), Expect = 2.285e-31
Identity = 8/21 (38.10%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  613 HVTAWAADITSRPAWAKVLAL 675
            ++  W  +I++RPAW K++ L
Sbjct:  191 NLNRWWNEISARPAWKKLMEL 211          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.450e-30
Identity = 75/189 (39.68%), Postives = 108/189 (57.14%), Query Frame = 3
Query:   54 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDK---GTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            +KV+G   S    R   +L E  ++YELVP+  + G+H++   L+ NPFG+VPVLE GD  LFESRAI +++ ++   +   G +L    +  A + VW EVEA Q  PP+  +  E V+ P  G   + A V+EN  KL K+L+VYEARL+   YLA D  +L DL     ++ L+ T    L  A P
Sbjct:    6 VKVYGWAISPFVSRALLALEEAGVDYELVPMSRQDGDHRRPEHLARNPFGKVPVLEDGDLTLFESRAIARHVLRKHKPELLGGGRL----EQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAALVHALP 190          

HSP 2 Score: 27.335 bits (59), Expect = 1.450e-30
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  592 SCLMHA-PHVTAWAADITSRPAWAKV 666
            + L+HA PHV+AW   + +RPA  KV
Sbjct:  183 AALVHALPHVSAWWQGLAARPAANKV 208          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.411e-29
Identity = 79/197 (40.10%), Postives = 107/197 (54.31%), Query Frame = 3
Query:   45 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEF-PDKGTQLTCPGKPIAPLL---VWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            M+ +KV G    T   RV   L E   EYELVP+D  AGEHK+   + LNPF ++P  + GD  LFESRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS T  DL+H+P     + TP  K+FD  P
Sbjct:    1 MSPVKVFGHPMLTNVARVLLFLEEVGAEYELVPMDFVAGEHKRPQHVQLNPFAKMPGFQDGDLVLFESRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYP 197          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.446e-27
Identity = 75/197 (38.07%), Postives = 105/197 (53.30%), Query Frame = 3
Query:   45 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEF-PDKGTQLTCPGKPIAPLL---VWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARP 611
            M+ +KV G    T   RV   L E   EYELVPVD  AGEHK+   + LNPF ++P  + G+    +SRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS +  DL+H+P     + TP  K+FD  P
Sbjct:    1 MSPVKVFGHPMLTNVARVLLFLEEVGAEYELVPVDFVAGEHKRPQHVQLNPFAKMPGFQDGESLHIKSRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAKVFDEYP 197          
BLAST of DY260170 vs. ExPASy Swiss-Prot
Match: GSTF5_ARATH (Glutathione S-transferase PM239X14 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.703e-26
Identity = 70/175 (40.00%), Postives = 106/175 (60.57%), Query Frame = 3
Query:   45 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFL-SLNPFGQVPVLEHGD-QKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWK--EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLP 557
            M  +K++G  +ST T+RV+ +  E  ++ ++VPVD+  GEHK+ A+L + +PFG +PVLE  D  K++ESRAI++Y+  ++    + L  P  P A  L  +   VE   FDPP+S L +E V+  M G+ T+    ++    L   +D YE  LS+ KYLA + FTL DL HLP
Sbjct:    1 MVTVKLYGMAYSTCTKRVYTTAKEIGVDVKIVPVDLMKGEHKEPAYLDNYHPFGVIPVLEDEDGTKIYESRAISRYLVAKYGKGSSLLPSPSDPKAYGLFEQAASVEYSSFDPPASSLAYERVFAGMRGLKTNEELAKKYVDTLNAKMDGYERILSKQKYLAGNDFTLADLFHLP 175          
The following BLAST results are available for this feature:
BLAST of DY260170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF2_ORYSJ8.901e-3442.71Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF1_MAIZE1.510e-3341.88Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF1_ORYSJ2.561e-3342.71Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF3_ARATH9.599e-3339.89Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH2.285e-3142.37Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF4_MAIZE1.450e-3039.68Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_WHEAT3.411e-2940.10Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_WHEAT5.446e-2738.07Glutathione S-transferase 2 OS=Triticum aestivum G... [more]
GSTF5_ARATH2.703e-2640.00Glutathione S-transferase PM239X14 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YI17FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260170 ID=DY260170; Name=DY260170; organism=Citrus clementina; type=EST; length=1049bp
AAGTCACAACTCTTAATAACAAGCGAGGGAAGGAAGACCCAAAGATGGCA
GGCATCAAGGTCCACGGTTCTGTTTTCTCAACTGCTACGCAGCGAGTTTT
CGCATCCCTCTACGAGAAGGAGCTCGAATACGAGCTTGTTCCCGTAGACA
TGAAGGCTGGTGAACACAAAAAGGAGGCCTTCCTTTCTTTGAATCCATTC
GGTCAAGTTCCGGTGCTTGAACACGGCGACCAGAAGCTCTTCGAATCAAG
GGCAATCACCCAATACATCGCCCAGGAGTTTCCAGACAAAGGCACCCAGT
TAACATGCCCAGGCAAGCCCATCGCCCCGTTATTGGTATGGAAGGAGGTG
GAGGCACTCCAGTTCGACCCCCCATCATCGAAGCTCAACTGGGAGCTCGT
GTACAAGCCAATGTTTGGAATGACCACTGATCCAGCTGCGGTTGAAGAAA
ATGAAGCTAAGCTTGCCAAAATTTTAGATGTTTACGAGGCCCGTTTGTCT
CAGTCCAAATACTTGGCGTGCGACAGCTTCACCTTGGTCGATTTGCATCA
TCTCCCCAATATTAATTTGTTGTTGGGGACGCCTGTCAAGAAGCTGTTTG
ATGCACGCCCCCCATGTTACCGCATGGGCAGCTGATATCACTTCCAGACC
GGCTTGGGCTAAGGTCCTTGCCTTGCTCAAACACTGAACACTCTGCCCGC
TACCTACTAAACGTTAGTCCCTCCTCGGTGGTCACTTATCTTTTGTAATA
CCTATTAAGCTGGTTTTCCAATTCCTATTCTCTTGTTTGGCGTTTGTCTC
CCATATTCTGCAAAATATTGAGGCCTTGTAATTTGGACCACCCGTTTCTG
ATTTTCACCGCACCGCCCCCAAATCAACTTTTAAGTTGAGGCGCTGAGGT
TTTAATTTTACCCAAGCACCCCAACAAAACCAAAACCCGGAAAAATTCCT
GCCTAAAGGCCCCCGCTGGCTAAAATTCCTAATCCACATGCACCCACCCG
CCCCCCGGGGCTTCTTCCCCAAAAACAAATCGAAAAAATCAAAAACCCA
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