DY260197

Overview
NameDY260197
Unique NameDY260197
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1085
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260197 vs. ExPASy Swiss-Prot
Match: SAHH_SULSO (Adenosylhomocysteinase OS=Sulfolobus solfataricus GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.188e-14
Identity = 43/104 (41.35%), Postives = 53/104 (50.96%), Query Frame = 3
Query:  126 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            +K+KDLS A  G+ +IE AE  MP LM  R  F   +P KG  I+  LH+T +TA L++TL   GA V     N  STQD               WKGE   EY
Sbjct:    3 YKIKDLSLASEGKKQIEWAERHMPTLMEIRKRFKAEKPLKGINISAVLHVTKETAALVKTLKIGGANVALAGSNPLSTQDDVAAALVEEGISVFAWKGENETEY 106          

HSP 2 Score: 23.483 bits (49), Expect = 5.188e-14
Identity = 11/28 (39.29%), Postives = 18/28 (64.29%), Query Frame = 2
Query:  488 DLIVDDGGDATLLIHEGVKAE-EIYQKT 568
            ++++DDG D    IHE V ++ +IY  T
Sbjct:  120 NIVMDDGADLHAYIHEKVSSKLDIYGGT 147          
BLAST of DY260197 vs. ExPASy Swiss-Prot
Match: SAHH_METKA (Adenosylhomocysteinase OS=Methanopyrus kandleri GN=ahcY PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.089e-13
Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 3
Query:  123 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            E+ ++D S A  GR  IE A   MP L A R  F   +P +G  +  +LH+  +TAVL+ETL A GAEV    CN  ST+D               W+GET +EY
Sbjct:    8 EYAIRDPSLAPKGRDMIEWARDHMPVLGAIRERFEEERPLEGITVGMTLHLEAKTAVLVETLMAGGAEVAITGCNPLSTKDEVAAALVEEGVHVYAWRGETEEEY 112          

HSP 2 Score: 23.0978 bits (48), Expect = 7.089e-13
Identity = 19/77 (24.68%), Postives = 25/77 (32.47%), Query Frame = 2
Query:  488 DLIVDDGGDATLLIHEGVKAEEIYQKTGKLPHPALTDNAEFPIVLTILTDGVEGRTPKSTHKMKERLVGVPQETTTG 718
            D+IVDDG D    +H                        EFP                    + ER++G  +ETTTG
Sbjct:  125 DIIVDDGADCIARVH-----------------------TEFP-------------------DLAERVIGATEETTTG 159          
BLAST of DY260197 vs. ExPASy Swiss-Prot
Match: SAHH_METMP (Adenosylhomocysteinase OS=Methanococcus maripaludis GN=ahcY PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.094e-13
Identity = 40/102 (39.22%), Postives = 54/102 (52.94%), Query Frame = 3
Query:  132 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            VKD+S A  G L++E A+  MP L     EF   +PF+G  I  +LH+  +TA+L ETL   GA++    CN  STQD               W+GET +EY
Sbjct:    4 VKDMSLAPSGHLKMEWAKRHMPVLCRIAEEFKNDKPFEGLTIGMALHLEAKTAILAETLLEGGAKIVITGCNPLSTQDDVAAACVEKGMEVYAWRGETNEEY 105          

HSP 2 Score: 25.0238 bits (53), Expect = 7.094e-13
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  488 DLIVDDGGDATLLIH 532
            D+I+DDG D   LIH
Sbjct:  118 DIIIDDGADLIFLIH 132          
BLAST of DY260197 vs. ExPASy Swiss-Prot
Match: SAHH_METJA (Adenosylhomocysteinase OS=Methanocaldococcus jannaschii GN=ahcY PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.620e-12
Identity = 39/104 (37.50%), Postives = 55/104 (52.88%), Query Frame = 3
Query:  126 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            ++V+D++    G  +I+ A+  MP L   R  F   +PFKG  I  +LH+  +TAVL ETL   GAE+    CN  STQD               W+GET++EY
Sbjct:    2 YEVRDINLWKEGERKIQWAKQHMPVLNLIRERFKEEKPFKGITIGMALHLEAKTAVLAETLMEGGAEIAITGCNPLSTQDDVAAACAKKGMHVYAWRGETVEEY 105          

HSP 2 Score: 22.7126 bits (47), Expect = 2.620e-12
Identity = 7/15 (46.67%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  488 DLIVDDGGDATLLIH 532
            D+++DDG D   L+H
Sbjct:  118 DIVIDDGCDLIFLLH 132          
BLAST of DY260197 vs. ExPASy Swiss-Prot
Match: SAHH_PYRHO (Adenosylhomocysteinase OS=Pyrococcus horikoshii GN=ahcY PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 3.401e-12
Identity = 42/107 (39.25%), Postives = 58/107 (54.21%), Query Frame = 3
Query:  117 GREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            GR++ VKDLS AD G  +I+     MP L   R EF   +PFKG +I  +LH+ ++TA L+ TL A GAEV   + N  STQD                +GE+ ++Y
Sbjct:    4 GRDYCVKDLSLADEGWKKIDWVSRFMPVLQHIRREFEEKKPFKGVRIAATLHLEMKTAFLLLTLKAGGAEVSAAASNPLSTQDDVVAALAKAGVKVYAIRGESKEQY 110          

HSP 2 Score: 22.3274 bits (46), Expect = 3.401e-12
Identity = 7/16 (43.75%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  488 DLIVDDGGDATLLIHE 535
            ++I+DDG D   L+H+
Sbjct:  123 NIIIDDGADMISLVHK 138          
BLAST of DY260197 vs. ExPASy Swiss-Prot
Match: SAHH_METTH (Adenosylhomocysteinase OS=Methanobacterium thermoautotrophicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 9.668e-12
Identity = 40/104 (38.46%), Postives = 52/104 (50.00%), Query Frame = 3
Query:  126 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            +KVKD+S A  G  +I   +  MP L   +++F   +PFKG  I   LH+  +T  L  TL A GAEV    CN  STQD               W+GET +EY
Sbjct:    3 YKVKDISLAPQGEKKIRWVQEHMPVLERIKSDFSEEKPFKGVTIGSCLHLEPKTINLGLTLQAGGAEVAMTGCNPLSTQDDATAAGAKMGLNMYGWRGETNEEY 106          

HSP 2 Score: 22.3274 bits (46), Expect = 9.668e-12
Identity = 6/15 (40.00%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  488 DLIVDDGGDATLLIH 532
            ++++DDG D   L+H
Sbjct:  119 EILIDDGADMIFLVH 133          
BLAST of DY260197 vs. ExPASy Swiss-Prot
Match: SAHH_AQUAE (Adenosylhomocysteinase OS=Aquifex aeolicus GN=ahcY PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.978e-11
Identity = 40/81 (49.38%), Postives = 49/81 (60.49%), Query Frame = 3
Query:  123 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 365
            EF VKDLS A+ G   IE AE++MP L   R  F   +P KG KI+  LH+T +TA L+ TL   GAEV   + N  STQD
Sbjct:    2 EFDVKDLSLAEEGLKRIEWAEMDMPVLRQIRERFSKEKPLKGKKISACLHVTTETANLMRTLKEGGAEVYLTASNPLSTQD 82          
BLAST of DY260197 vs. ExPASy Swiss-Prot
Match: SAHH_PYRAE (Adenosylhomocysteinase OS=Pyrobaculum aerophilum GN=ahcY PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.559e-11
Identity = 41/105 (39.05%), Postives = 53/105 (50.48%), Query Frame = 3
Query:  123 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            E +VKD S AD GR ++  AE+ MP L+  R  F   +P  G  I   LH+T +T VL+ TL A GAEV     N  STQD               W+G + +EY
Sbjct:    3 ESRVKDSSLADRGREQLYWAELNMPVLLEIRRRFEKEKPLSGHVIAACLHVTKETGVLVRTLAAGGAEVVLIPSNPLSTQDDVAAALAQEGIHVYAWRGMSEREY 107          

HSP 2 Score: 20.7866 bits (42), Expect = 3.559e-11
Identity = 10/25 (40.00%), Postives = 15/25 (60.00%), Query Frame = 2
Query:  491 LIVDDGGDATLLIHE---GVKAEEI 556
            + +DDG D T  IH+   GV+ + I
Sbjct:  121 ITMDDGADLTATIHKIGHGVRDQTI 145          
BLAST of DY260197 vs. ExPASy Swiss-Prot
Match: SAHH_PYRFU (Adenosylhomocysteinase OS=Pyrococcus furiosus GN=ahcY PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 4.625e-11
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 3
Query:  117 GREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            G+++ VKDLS A+ G  +I+     MP L   + EF   +PFKG +I  +LH+ ++TA L+ TL A GAEV   + N  STQD                +GE+ ++Y
Sbjct:    4 GKDYCVKDLSLAEEGWKKIDWVSRFMPVLQYIKREFEEKKPFKGVRIAATLHLEMKTAFLLLTLKAGGAEVSAAASNPLSTQDDVVAALAKAGVKVYAIRGESREQY 110          

HSP 2 Score: 22.3274 bits (46), Expect = 4.625e-11
Identity = 7/16 (43.75%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  488 DLIVDDGGDATLLIHE 535
            ++I+DDG D   L+H+
Sbjct:  123 NIIIDDGADMISLVHK 138          
The following BLAST results are available for this feature:
BLAST of DY260197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
SAHH_SULSO5.188e-1441.35Adenosylhomocysteinase OS=Sulfolobus solfataricus ... [more]
SAHH_METKA7.089e-1340.00Adenosylhomocysteinase OS=Methanopyrus kandleri GN... [more]
SAHH_METMP7.094e-1339.22Adenosylhomocysteinase OS=Methanococcus maripaludi... [more]
SAHH_METJA2.620e-1237.50Adenosylhomocysteinase OS=Methanocaldococcus janna... [more]
SAHH_PYRHO3.401e-1239.25Adenosylhomocysteinase OS=Pyrococcus horikoshii GN... [more]
SAHH_METTH9.668e-1238.46Adenosylhomocysteinase OS=Methanobacterium thermoa... [more]
SAHH_AQUAE1.978e-1149.38Adenosylhomocysteinase OS=Aquifex aeolicus GN=ahcY... [more]
SAHH_PYRAE3.559e-1139.05Adenosylhomocysteinase OS=Pyrobaculum aerophilum G... [more]
SAHH_PYRFU4.625e-1136.45Adenosylhomocysteinase OS=Pyrococcus furiosus GN=a... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YK12FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260197 ID=DY260197; Name=DY260197; organism=Citrus clementina; type=EST; length=1085bp
CACTTTGTTTGGTTTTTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCT
TCTTCCTTTTAGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGT
CCAGAAATCCGCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGG
CTGACTTCGGCCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGG
CTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGC
CAAGATCACCGGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCG
AGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATC
TTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTC
CGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTACCTGGTGGTGCACG
GAGAAAGCCCCTGGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCG
ATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAG
GAGATCTACCAGAAGACCGGGAAGTTGCCCCACCCGGCCCTCACCGACAA
CGCCGAGTTTCCGATTGTTTTGACTATCCTTACAGATGGGGTTGAAGGCC
GAACCCCAAAAAGTACCCACAAAATGAAGGAAAGATTAGTTGGCGTTCCC
CAAGAAACCACCACCGGGCGTCCAGAGATTGGAATCCAAGGCAAGAAAAA
TGGAACCCCCCTTGTTCCCCGCCATCCAATGGCCAATGCCCCTGCTCCCC
AAAAGCCAGTTTTGATAACTCTGGATGGAAGCCCCCCCCCCCCCTCCCCG
AATGGTTTGGTAGACAACCCCCACGAGGTAACACACTCCCCGAAACGGTG
GCCGGTTCCTCCGCGCGTCACCGCAAACCCTAGGCAAACGGGCTTGGACC
TCTCTCTTTTTAAACGCACACCGGTGGCCTCTGTTTATTCGTTTCCCACA
ACATGACTCGATTCTTGCGCCTCCCGCCGGGCCTCCTTCGGGAGGACCCC
CCCTCCCTCTCATACCCCCGCACTGGAAAGGCCAT
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