DY260244

Overview
NameDY260244
Unique NameDY260244
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1068
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260244 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.029e-40
Identity = 91/224 (40.62%), Postives = 125/224 (55.80%), Query Frame = 1
Query:   37 TDDEVMAMFQAWLVKHGQAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKV-GLNRFADLTHEEYRSLPLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDPEEDYPLQAIDGSCDTYRKNAKVVTIDDYEDVPPK*PESLAKG 702
            ++ +    F  W +K  + Y++  E   R+ IFK N+ ++D  NS+  +  V GLN FAD+T+EEYR   LG R  A   +    R    +  + +  P S+DWR K AV  +KDQG CGSCW+FST  + EG + + T  L+SLSEQ LVDC     N GC+GGLM+ AF++II N GID E  YP  A  GS   + K+    TI  Y ++      SL  G
Sbjct:   28 SESQYRTAFTEWTLKFNRQYSS-SEFSNRYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHSYNGYDGREVLNVEDL-QTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCSGPEENFGCDGGLMNNAFDYIIKNKGIDTESSYPYTAETGSTCLFNKSDIGATIKGYVNITAGSEISLENG 249          

HSP 2 Score: 26.1794 bits (56), Expect = 7.029e-40
Identity = 11/30 (36.67%), Postives = 19/30 (63.33%), Query Frame = 2
Query:  689 ALQKAVCNPPLSVALEGGGMAFPLYESGIF 778
            +L+    + P+SVA++    +F LY SGI+
Sbjct:  245 SLENGAQHGPVSVAIDASHNSFQLYTSGIY 274          
BLAST of DY260244 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 9.177e-40
Identity = 85/186 (45.70%), Postives = 110/186 (59.14%), Query Frame = 1
Query:   79 KHGQAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTHEEYRSLPLGARFGAKRTSLKSKRSNRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDPEEDYPLQAIDGSC 615
            K G+ Y    E+  R  +F + L+FI EHN        TY + +N F+DLTHEE  +   G          + +     LP+     P +  VDWR KGAV  VKDQG CGSCWAFS +AA+EG + + TG L+SLSEQ LVDC +SY N+GCNGG    A+++II N GID E  YP +AID +C
Sbjct:   26 KFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMT--------RRRHPLSVLPKSAPTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNC 203          

HSP 2 Score: 28.1054 bits (61), Expect = 9.177e-40
Identity = 14/34 (41.18%), Postives = 21/34 (61.76%), Query Frame = 2
Query:  680 DQKALQKAVCNP-PLSVALEGGGMAFPLYESGIF 778
            D+ ALQ AV N  P+SV ++ G  +F  Y  G++
Sbjct:  224 DESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVY 257          
BLAST of DY260244 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.205e-39
Identity = 70/116 (60.34%), Postives = 89/116 (76.72%), Query Frame = 1
Query:  325 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDPEEDYPLQAIDGSCDTYRKNAKVVTIDDYEDVP 672
            LP+ +DWRKKGAV  VK+QGSCGSCWAFST++ VE IN+I TG+LISLSEQELVDCD   N GC GG   +A+++II+NGGID + +YP +A+ G C   +  +KVV+ID Y  VP
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK-NHGCLGGAFVFAYQYIINNGGIDTQANYPYKAVQGPC---QAASKVVSIDGYNGVP 112          

HSP 2 Score: 38.1206 bits (87), Expect = 1.205e-39
Identity = 17/39 (43.59%), Postives = 25/39 (64.10%), Query Frame = 2
Query:  680 DQKALQKAVCNPPLSVALEGGGMAFPLYESGIFTGRCGT 796
            ++ AL++AV   P +VA++     F  Y SGIF+G CGT
Sbjct:  115 NEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGT 153          
BLAST of DY260244 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 2.021e-39
Identity = 82/207 (39.61%), Postives = 119/207 (57.49%), Query Frame = 1
Query:   61 FQAWLVKHGQAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTHEEYRSLPLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGS---LISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDPEEDYPLQAIDGSCDTYRKNAKVVTIDDYEDV 669
            F  W+  H + Y++  E   R++IFK N+ ++ + NS+     +GLN FAD+T++EYR+  LG  F         +       ++      +VDWR +GAV  +K+QG CG CW+FST  + EG + I +G+   L+SLSEQ L+DC  SY N GC GGLM  AFE+II+N GID E  YP  A DG    ++ +     I  Y++V
Sbjct:   30 FTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDGSALIGTEEE------KIFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKECKFKTSNIGAQIVSYQNV 229          

HSP 2 Score: 33.8834 bits (76), Expect = 2.021e-39
Identity = 15/32 (46.88%), Postives = 22/32 (68.75%), Query Frame = 2
Query:  683 QKALQKAVCNPPLSVALEGGGMAFPLYESGIF 778
            + +LQ A  N P+SVA++    +F LYESGI+
Sbjct:  234 EASLQSASNNAPVSVAIDASNESFQLYESGIY 265          
BLAST of DY260244 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.634e-39
Identity = 88/188 (46.81%), Postives = 114/188 (60.64%), Query Frame = 1
Query:   61 FQAWLVKHGQAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTHEEYRSLPLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG--SLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDPEEDYPLQAIDGSC 615
            F  W++ H + Y++  E   RF IFK N+ +I+E N++     +GLN FAD+T+EEYR+  LG  F A  +SL+   S +     G    +SVDWR KGAV  +K+QG CG CW+FS   A EG   I  G   L S+SEQ+L+DC  SY N GC GGLM  AFE+II+NGGID E  YP  A    C
Sbjct:   30 FTNWMIAHQRHYSS-EEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGTPFDA--SSLEMTPSEKVF---GGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSYGNNGCEGGLMTLAFEYIINNGGIDTESSYPFTANTEKC 211          

HSP 2 Score: 23.8682 bits (50), Expect = 2.634e-39
Identity = 11/29 (37.93%), Postives = 15/29 (51.72%), Query Frame = 2
Query:  692 LQKAVCNPPLSVALEGGGMAFPLYESGIF 778
            L   V   P SVA++    +F  Y SGI+
Sbjct:  236 LAAKVTQGPTSVAIDASQPSFQFYSSGIY 264          
BLAST of DY260244 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.868e-39
Identity = 88/198 (44.44%), Postives = 118/198 (59.60%), Query Frame = 1
Query:   61 FQAWLVKHGQAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTHEEYRSLPLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDPEEDYPLQAIDGSCDTYRKNAKVVTI 651
            F  + ++H + Y+++ E ++RFEIF +NL+ I  HN +  +YK+G+N F DLT +E+R   LGA      T+    + N  L  V   LP++ DWRK G V+ VK QG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+D EE YP    +G C   + N  V  I
Sbjct:   57 FARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNCSATT----KGNLKLTNV--VLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNGICKFSQANIGVKVI 248          
BLAST of DY260244 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 4.478e-39
Identity = 87/219 (39.73%), Postives = 131/219 (59.82%), Query Frame = 1
Query:   25 SSWRTDDEVMAMFQAWLVKHGQAYNALGEKEKRFEIFKENLRFIDEHNSENRT---YKVGLNRFADLTHEEYRSLPLGARFGAKRTSLKSKRSNRYLPRVGEAL---PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDPEEDYPLQAIDGSCDTYRKNAKVVTIDDYE 663
            + + T  +V ++FQ W  +HG+ Y+   E+ KR EIFK N  +I + N+  ++   +++GLN+FAD+T +E+    L A    K  S + K +N+ + +   +    P S DWRKKG + +VK QG CG  WAFS   A+E  + I TG L+SLSEQELVDC    +EG   G    +FE+++++GGI  ++DYP +A +G C   +   K VTID YE
Sbjct:   32 TKFTTQKQVSSLFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQA---PKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDC-VEESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEGRCKANKIQDK-VTIDGYE 245          

HSP 2 Score: 26.9498 bits (58), Expect = 4.478e-39
Identity = 14/40 (35.00%), Postives = 22/40 (55.00%), Query Frame = 2
Query:  683 QKALQKAVCNPPLSVALEGGGMAFPLYESGIFTGRCGTSP 802
            ++A   A+   P+SV+++     F LY  GI+ G   TSP
Sbjct:  259 EQAFLSAILEQPISVSIDAKD--FHLYTGGIYDGENCTSP 296          
BLAST of DY260244 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.879e-39
Identity = 85/206 (41.26%), Postives = 120/206 (58.25%), Query Frame = 1
Query:   61 FQAWLVKHGQAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTHEEYRSLPLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG--SLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDPEEDYPLQAIDGSCDTYRKNAKVVTIDDYEDV 669
            F  W++ H + Y++  E   R+ IFK N+ +++E N++     +GLN FAD+++EEYR+  LG  F A  +SL+   S++      +     VDWR +GAV  +K+QG CG CW+FST  A EG   +  G  +L+SLSEQ L+DC  SY N GC GGLM  AFE+II+N GID E  YP  A DG    +        +  Y +V
Sbjct:   30 FTNWMIAHQRHYSS-EEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGTPFDA--SSLEMTESDKIFDASAQ-----VDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDCSGSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKKCKFNPKNVAAQLSSYVNV 227          

HSP 2 Score: 26.1794 bits (56), Expect = 9.879e-39
Identity = 12/29 (41.38%), Postives = 16/29 (55.17%), Query Frame = 2
Query:  692 LQKAVCNPPLSVALEGGGMAFPLYESGIF 778
            L   V   P SVA++    +F LY SGI+
Sbjct:  235 LAAKVTQGPTSVAIDASNQSFQLYVSGIY 263          
BLAST of DY260244 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 5.410e-38
Identity = 91/215 (42.33%), Postives = 125/215 (58.14%), Query Frame = 1
Query:   61 FQAWLVKHGQAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTHEEYRSLPLGARFGAKRTSLKSKRSNR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDPEEDYPLQAIDGSCDTYR-------KNAKVVTIDD 657
            F ++  K  ++Y    E + RF +FK NL     H + + T + G+ +F+DLT  E+R   LG +   KR  L +       LP     LP+  DWR+KGAV  VKDQGSCGSCWAFST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+++++GG+  E+DY     DGSC   +        N  VVT+D+
Sbjct:   48 FTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLK---KRLRLPAHAQKAPILPTTN--LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDKSKVVASVSNFSVVTLDE 257          
BLAST of DY260244 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 5.410e-38
Identity = 87/199 (43.72%), Postives = 119/199 (59.80%), Query Frame = 1
Query:   61 FQAWLVKHGQAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTHEEYRSLPLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDPEEDYPLQAIDGSCDTYRKNAKVVTID 654
            F  +  ++G+ Y  + E + RF IFKENL  I   N +  +YK+G+N+FADLT +E++   LGA   A+  S   K S++       ALP++ DWR+ G V+ VKDQG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+D E+ YP    D +C    +N  V  ++
Sbjct:   59 FARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGA---AQNCSATLKGSHKVTEA---ALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDETCKFSAENVGVQVLN 251          
The following BLAST results are available for this feature:
BLAST of DY260244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CYSP2_DICDI7.029e-4040.63Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CRUST_PANBO9.177e-4045.70Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
ERVC_TABDI1.205e-3960.34Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
CYSP4_DICDI2.021e-3939.61Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CYSP6_DICDI2.634e-3946.81Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
CYSP3_SOLLC2.868e-3944.44Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
P34_SOYBN4.478e-3939.73P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CYSP7_DICDI9.879e-3941.26Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CYSP_PEA5.410e-3842.33Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
ALEU_ARATH5.410e-3843.72Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YN10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260244 ID=DY260244; Name=DY260244; organism=Citrus clementina; type=EST; length=1068bp
GATAAAACCCCTCTTTCCAAATCCAGCAGCTGGAGGACCGACGATGAGGT
TATGGCTATGTTCCAGGCCTGGCTCGTGAAGCATGGCCAGGCTTATAACG
CTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTAGG
TTTATTGATGAACATAACTCCGAGAACCGGACCTACAAGGTTGGGTTGAA
CCGGTTTGCTGATTTGACCCACGAGGAGTACCGGTCCCTGCCTCTGGGTG
CACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACCGT
TATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAA
GAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCT
GGGCATTTTCCACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACA
GGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATC
ATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCA
TTATTGATAATGGAGGTATTGACCCAGAAGAAGATTACCCCCTACAAGCC
ATTGATGGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACCAT
TGATGACTATGAAGATGTTCCCCCTAAATGACCAGAAAGCCTTGCAAAAG
GCCGTTTGCAATCCACCCCTGAGTGTTGCCCTTGAAGGAGGTGGCATGGC
ATTCCCGTTATATGAATCCGGTATATTTACCGGAAGATGTGGGACCTCCC
CTGGACCTTGGTGTTACCTGCTGTTGGATATGGCCCCAAAAATGGACCCC
GATTACCTGAATTGTGAAAAATTTCCGGGGGGCGTAGCCCGGGGAGAAGG
CCGGCCTAATTTAGGAAGGGACCCCTACCGCGGCCGGGCCCCCCCCCCCG
GCCAATGGTGGAAATTCCCCCGGGCGGCCCCCCCCACCCCCTAAAAAAAA
GGCCCAAAACCCCCCCCCCCCCGGACCCCCCCCCCCCCCCCCCCCCCCAA
AAAAGCCCCCCCGGCGGG
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