DY260277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_DICDI (Eukaryotic translation initiation factor 1A OS=Dictyostelium discoideum GN=eif1a PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.516e-34 Identity = 69/95 (72.63%), Postives = 78/95 (82.11%), Query Frame = 1 Query: 121 EKRELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLN 405 +KREL FKE+GQEYA VLRMLGNGR EA C DG KRLCHI G++ KK WI GDIIL+ LRDYQ+DKADVIL+Y DEAR LK YGELPE+ R+N Sbjct: 21 QKRELQFKEEGQEYAQVLRMLGNGRLEASCFDGEKRLCHISGRLRKKEWINNGDIILIQLRDYQNDKADVILRYNVDEARNLKTYGELPETARIN 115
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_YEAST (Eukaryotic translation initiation factor 1A OS=Saccharomyces cerevisiae GN=TIF11 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.955e-31 Identity = 61/94 (64.89%), Postives = 75/94 (79.79%), Query Frame = 1 Query: 124 KRELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLN 405 KREL++KE+GQEYA + +MLGNGR EA C DG KR+ HIRGK+ KKVW+ GDIILV LRD+QDD+ DV+ KY DEAR LK GELPE+ ++N Sbjct: 23 KRELIYKEEGQEYAQITKMLGNGRVEASCFDGNKRMAHIRGKLRKKVWMGQGDIILVSLRDFQDDQCDVVHKYNLDEARTLKNQGELPENAKIN 116
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_SCHPO (Eukaryotic translation initiation factor 1A OS=Schizosaccharomyces pombe GN=tif11 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 2.263e-30 Identity = 63/96 (65.62%), Postives = 75/96 (78.12%), Query Frame = 1 Query: 118 HEKRELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLN 405 +EKREL + E+GQ YA V +MLGNGR EA C DG KRL HIRGK+ KKVWI GDIIL+ LR++QD+K DVILKY DEAR LK GELPE+ ++N Sbjct: 21 NEKRELTYAEEGQMYAQVTKMLGNGRIEAACFDGVKRLGHIRGKLRKKVWINQGDIILLSLREFQDEKGDVILKYTADEARTLKNQGELPETAKIN 116
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_NATPD (Translation initiation factor 1A OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eif1a PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.552e-13 Identity = 35/90 (38.89%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 124 KRELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPES 393 ++ L E + +A V MLG R + C+DGT+R I G+M K++WI D++LV D+QD+KADV+ +Y EA L+ G + +S Sbjct: 7 RKNLRMPEGDEVFAVVTNMLGANRVKVRCMDGTERTARIPGRMQKRIWIREDDVVLVEPWDWQDEKADVVWRYEKQEADQLREEGHITDS 96
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_SULIY (Translation initiation factor 1A OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 127 RELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 366 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_SULIN (Translation initiation factor 1A OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 127 RELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 366 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_SULIM (Translation initiation factor 1A OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 127 RELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 366 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_SULIL (Translation initiation factor 1A OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 127 RELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 366 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_SULIK (Translation initiation factor 1A OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 127 RELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 366 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_SULIA (Translation initiation factor 1A OS=Sulfolobus islandicus (strain M.16.27) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 127 RELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 366 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92 The following BLAST results are available for this feature:
BLAST of DY260277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260277 ID=DY260277; Name=DY260277; organism=Citrus clementina; type=EST; length=852bpback to top |