DY260277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_SULSO (Translation initiation factor 1A OS=Sulfolobus solfataricus GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 127 RELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 366 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPRPEEGQTICVVKKMLGGDHLIVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_HALMA (Translation initiation factor 1A OS=Haloarcula marismortui GN=eif1a PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.191e-12 Identity = 33/89 (37.08%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 124 KRELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 390 ++ L E+ + +A V+ MLG R + C+DG +R I GKM K++WI D++LV D+QD+KAD+ +Y +A L+ G + E Sbjct: 7 RKNLRMPEEDEVFAVVMDMLGANRVKVRCMDGVERTARIPGKMQKRIWIREDDVVLVEPWDWQDEKADITWRYEKQDADQLREEGHIQE 95
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_HALS3 (Translation initiation factor 1A OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.086e-12 Identity = 35/87 (40.23%), Postives = 50/87 (57.47%), Query Frame = 1 Query: 124 KRELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGEL 384 ++ L ED + +A V MLG R + C DG +R I G+M K++WI DI+LV D+QDDKADV +Y +A L+ G + Sbjct: 8 RKNLRMPEDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPWDWQDDKADVTWRYEKSDADQLREEGHI 94
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A1_HALSA (Translation initiation factor 1A 1 OS=Halobacterium salinarium GN=eIF1A1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.086e-12 Identity = 35/87 (40.23%), Postives = 50/87 (57.47%), Query Frame = 1 Query: 124 KRELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGEL 384 ++ L ED + +A V MLG R + C DG +R I G+M K++WI DI+LV D+QDDKADV +Y +A L+ G + Sbjct: 8 RKNLRMPEDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPWDWQDDKADVTWRYEKSDADQLREEGHI 94
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_METKA (Translation initiation factor 1A OS=Methanopyrus kandleri GN=eIF1A PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.056e-11 Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 127 RELVFKEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 390 +++ ++G+ + V +MLGN R + C+DG R+ I GKM K+VWI GD++LV ++Q ++ADV +Y + LK G+L E Sbjct: 11 KKIRLPKEGEIFGVVEKMLGNDRVQVRCVDGKTRVARIPGKMRKRVWIREGDVVLVKPWEFQPERADVTWRYTRVQVDWLKRKGKLDE 98
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_PICTO (Translation initiation factor 1A OS=Picrophilus torridus GN=eif1a PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.801e-11 Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 142 KEDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 390 K+ G+ Y V +M G R MC DG R C I GKM K++WI GD+++V ++QD+K D+I +Y +A L LPE Sbjct: 17 KKSGEIYGIVEKMSGASRLIVMCEDGVTRNCRIPGKMKKRMWIREGDLVIVKPWEFQDEKGDIIYRYTKTQAAYLSRNHMLPE 99
BLAST of DY260277 vs. ExPASy Swiss-Prot
Match: IF1A_DESK1 (Translation initiation factor 1A OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=eIF1A PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.940e-11 Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 145 EDGQEYAPVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 390 ++G V+R LG A C+DG R I GK+ +KVWI GDIILVGL D+ +K +V+ KY +E L G +P+ Sbjct: 25 DEGTIICGVVRHLGGDYLIAKCLDGVDRKIRIPGKLRRKVWITEGDIILVGLWDFSSEKGEVVYKYGKNEVNKLVEKGVVPK 106 The following BLAST results are available for this feature:
BLAST of DY260277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260277 ID=DY260277; Name=DY260277; organism=Citrus clementina; type=EST; length=852bpback to top |