DY260437

Overview
NameDY260437
Unique NameDY260437
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1252
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260437 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.040e-14
Identity = 39/107 (36.45%), Postives = 67/107 (62.62%), Query Frame = 2
Query:    2 EVYSMELKSLAMNLISKMGKVLNIKDEELREFF--DNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAFIVNIGDTLE 316
            E Y+  L ++   L   +   L ++ +EL++    DN    +++NYYPPCP+P+  +G+  H+D S +TIL+  N+V+GLQ   DG+W  +  +PNA +++IGD +E
Sbjct:  162 EEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDNLEYLLKINYYPPCPRPDLALGVVAHTDMSTVTILVP-NDVQGLQACKDGRWYDVKYIPNALVIHIGDQME 267          
BLAST of DY260437 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.358e-14
Identity = 38/103 (36.89%), Postives = 60/103 (58.25%), Query Frame = 2
Query:    8 YSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAFIVNIGDTLE 316
            +S ++K L   L+  + + L +    L+++ D        NYYPPCPQPE  MG   H+D   +TILLQ +++ GLQ+ +   W+ + P P + +VNIGD L+
Sbjct:  179 FSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQ-DDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQ 280          
BLAST of DY260437 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.160e-14
Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = 2
Query:    8 YSMELKSLAMNLISKMGKVLNIKDEELREF---FDNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAFIVNIGDTLE 316
            Y+ +L+ LA  ++  +   L + +  L +     +     M++NYYP CPQPE  +G+  H+D SALT +L  N V GLQ+  +GKW+    +PN+ +++IGDTLE
Sbjct:  176 YAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLE 280          
BLAST of DY260437 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.160e-14
Identity = 39/107 (36.45%), Postives = 63/107 (58.88%), Query Frame = 2
Query:    2 EVYSMELKSLAMNLISKMGKVLNIKDEELREFF--DNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAFIVNIGDTLE 316
            E Y   ++ +   +   +   L ++  E+ E    D     +++NYYPPCP+P+  +G+  H+D S +TIL+  NEV+GLQ+  DG W  +  +PNA IV+IGD +E
Sbjct:  173 EEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVP-NEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVE 278          
BLAST of DY260437 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.392e-14
Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 2
Query:    2 EVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAFIVNIGDTLE 316
            E Y  E+  +A  +   +GK +N+  E     F+     +R+N Y P     +V GL PH+D S LTIL Q +++ GL+++N+G+WI + P   A  VNIGD  +
Sbjct:  157 ETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENSFLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQ-DQIGGLELENNGQWISVKPCLEALTVNIGDMFQ 260          

HSP 2 Score: 24.6386 bits (52), Expect = 6.392e-14
Identity = 18/52 (34.62%), Postives = 24/52 (46.15%), Query Frame = 3
Query:  315 SIEHRAIVNSIQERLSIATFYTKRLDGEIYPASSLISEKTPALFRRVTVEEY 470
            S+ HR I  +  ER+SIA F    L+ EI           P  +RR +  EY
Sbjct:  269 SVRHRVISPANIERMSIAFFVCPYLETEIDCFG------YPKKYRRFSFREY 314          
BLAST of DY260437 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.802e-14
Identity = 38/106 (35.85%), Postives = 68/106 (64.15%), Query Frame = 2
Query:    8 YSMELKSLAMNLISKMGKVLNIKDEELREF---FDNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAFIVNIGDTLE 316
            Y+ ++++LA  +++ +   L +++  L +     ++    M++NYYP CPQPE  +G+  H+D SALT +L  N V GLQ+  +G+W+    +PN+ I++IGDT+E
Sbjct:  176 YAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIE 280          
BLAST of DY260437 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.802e-14
Identity = 39/107 (36.45%), Postives = 66/107 (61.68%), Query Frame = 2
Query:    2 EVYSMELKSLAMNLISKMGKVLNIKDEELREFF--DNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAFIVNIGDTLE 316
            E Y+  ++ +   L + +   L ++   L+E    D+    +++NYYPPCP+P+  +G+  H+D SALT+L+  NEV GLQ+  D +WI    +PNA +++IGD +E
Sbjct:  160 EEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVP-NEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIE 265          
BLAST of DY260437 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.802e-14
Identity = 36/103 (34.95%), Postives = 61/103 (59.22%), Query Frame = 2
Query:    8 YSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAFIVNIGDTLE 316
            YS ++ +L   L   + + L ++   L +   +    M  +YYPPCP+P+  +G + HSD S LT+LL  +++EGLQ++ +G W  +  +  A I+NIGD L+
Sbjct:  184 YSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLP-DQIEGLQVRREGHWFDVPHVSGALIINIGDLLQ 285          
BLAST of DY260437 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.150e-13
Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 2
Query:    8 YSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQSMRM---NYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQ--IKNDGKWIPITPLPNAFIVNIGDTLE 316
            YS+E++ L M ++  + + L +K      +FDN    ++M   NYYPPCP P   +G   H DG+ +T+L Q  ++ GLQ  I  D  WI + P+P AF+VN+G TL+
Sbjct:  161 YSVEVRKLTMRMLDYICEGLGLK----LGYFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQ--DLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLK 262          
BLAST of DY260437 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.501e-13
Identity = 37/106 (34.91%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    8 YSMELKSLAMNLISKMGKVLNIKDEELREFF--DNGFQ-SMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNDGKWIPITPLPNAFIVNIGDTLE 316
            ++++L+ LA  L+  + + L ++   L++ F   NG     +++ YPPCP PE + GL  H+D   L +L Q ++V GLQ+  DG+WI + P+ ++ ++N+GD LE
Sbjct:  117 FALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLE 222          
The following BLAST results are available for this feature:
BLAST of DY260437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
FLS_MALDO1.040e-1436.45Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
ACCH3_SOLLC1.358e-1436.891-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
LDOX_MALDO5.160e-1437.74Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FLS_PETHY5.160e-1436.45Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
G2OX7_ARATH6.392e-1436.19Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
LDOX_PETHY8.802e-1435.85Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
FLS_CITUN8.802e-1436.45Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
ACCH3_ARATH8.802e-1434.951-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
HY6H_HYONI1.150e-1338.89Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
ACCO_PRUMU1.501e-1334.911-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YH20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260437 ID=DY260437; Name=DY260437; organism=Citrus clementina; type=EST; length=1252bp
GGAAGTTTACTCAATGGAGTTAAAATCTTTGGCCATGAACCTGATATCGA
AAATGGGAAAAGTTTTAAATATCAAAGATGAAGAATTGAGAGAATTCTTT
GACAATGGTTTCCAATCAATGAGGATGAACTATTACCCTCCATGTCCTCA
GCCAGAAAAGGTTATGGGCCTCACCCCTCATTCTGATGGCTCTGCTCTTA
CCATTCTGCTACAAATCAATGAAGTAGAAGGTCTCCAGATCAAGAACGAT
GGAAAATGGATTCCTATCACACCGCTGCCAAATGCTTTCATTGTCAACAT
CGGAGACACATTAGAGCATTGAGCATCGTGCAATTGTGAACTCTATACAA
GAAAGACTTTCCATTGCCACATTTTACACAAAGAGATTAGATGGTGAAAT
ATATCCAGCATCCAGTTTGATATCTGAAAAAACTCCTGCATTGTTTCGAA
GAGTGACGGTTGAAGAATACTTTAGGAGCCGATTTGCTCGTGAGCTTAGG
GGAAAATCTCACCTGGATGACCTGAGAATTCAACATGGTCGAGGCTAGCA
TAAATTATTTTGGATAGTTGCAGATTTGTGCCAGGGAATTTTCTGATGAT
AATTGTGCTTATTTTGGACCCGTGTCCTTTCATTTTTGGAATAAAATTTT
TGCCGGCCTTGTCAGTTTTTTATCAGATTTCCAAGACACATTTTCCCTTA
AAAAAAAAAAAAAAAAAAAAAAACCCCCACTTTCTTGGAAAAAGTTGGGA
TCAATAAAAAAGCCTTTGCCTTACCATTTTGTTGGCACTAAACGGGTCCA
CCATCCATACAAAAAAAAAACCATTTTTTTCCCCCCACCCCCAGAAACAC
CCCCCCATAGGTGATTCAACATAACCTGGCCACAACCTTTTTTCCGCCTC
CCCCCCCCGCGCCCGCCTCCCCAAAAACCTCAAATGTGACACTCCTCCCC
ACTAAAACAAACCTCTCTCTCACTCTCTGTAACTAAAACCCTCTTGCGTC
CTTCGACACACCAACAGCCAAACTTTCTCTCCATACACCGATAGAACACT
CACTCCCCTTCATCATTCAAAAAAAAACCTGCTCTTTCCTCAAATAGCCA
GACAACAACACCAACCCCAACGAGCGGCACTATACTATCACAAAGCATGG
CCACCGCACCCGCGCGCGCACACGCACACCACCCAACTCTACGCACCCCC
TCCCTCCTCATCGCTCGCTAACAATATAACCCCGACGTCAACCACCGGTC
TT
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