DY260441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.669e-23 Identity = 61/189 (32.28%), Postives = 96/189 (50.79%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKG 655 GYD ++T FSPDG ++Q++YA +AV T IGIK K +V+ EK A ++ S ++ + H G + AGLA+DGR ++ A++ A + +Y EP+ + L + VA + T + +RPFG +++ G D+ P+L+M EPSG Y AIG+G Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKKGW---------------------------TAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLFMTEPSGQYMPYQAVAIGQG 170
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSA5_YEAST (Proteasome component PUP2 OS=Saccharomyces cerevisiae GN=PUP2 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 3.669e-23 Identity = 71/209 (33.97%), Postives = 100/209 (47.85%), Query Frame = 2 Query: 92 YDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTL------------YWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEI 679 YD V+TFSP+GR+FQ+EY+ +A+ T IGI K+G+V+GVEK S ++ S +I + RH G A++GL AD R ++ A++ A + Y E I V+ L Q V C L RPFG +++ G+D DG QL+ EPSG YRY AIG G A+ E+ Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGS---------------------------TAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSV------CDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAEL 183
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 4.792e-23 Identity = 67/216 (31.02%), Postives = 112/216 (51.85%), Query Frame = 2 Query: 92 YDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPG-SNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRD-GPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDLPNKGFIEL 733 YD T FSP+GR++Q+EYA +A+ N+G + IGI KDG+V+ EK + SK++ S +++ + H AVAG+ +D ++ A+ +A Y Y EP+PV++L Q + T + LRPFG + G+D++ G QLYM +PSG + TAIG AA++ + + +++D+ + ++L Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAG---------------------------SAIGILAKDGVVLIGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLK--QDYKDDVTREDAVKL 191
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.067e-22 Identity = 62/190 (32.63%), Postives = 99/190 (52.11%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGTAIGKG 655 GYD ++T FSPDG ++Q++YA +AV T +G+K K G+V+ EK A++++ +I + H G AGLA+DGR ++ A+S+A + +Y EPI ++ L + ++ T + +RPFG +I+GG D+ P+L M EPSG Y+ AIG+G Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKRGW---------------------------TTLGVKTKSGVVLLAEKRKATQLLDVDGIEKIFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHGGVRPFGVALIVGGIDKGKQPKLLMTEPSGQFMPYYAVAIGQG 171
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.067e-22 Identity = 73/233 (31.33%), Postives = 116/233 (49.79%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDLPNKGFIELPKNHLRRC--PNEA*GKG 781 GYD ++T FSPDG ++Q++YA +AV T +G+K K+ +V+ EK AS+++ S ++ + H G + AGLA+DGR ++ A++ + + VY EPI + L + ++ + T + +RPFG +I+GG DR +L+M EPSG Y AIG+G A + K ++ DL + I L N L+ P E G G Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKKGW---------------------------TTLGVKTKNAVVILGEKKKASQLLDVDSIEKVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQHGGVRPFGVALIVGGVDRGVTKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEK--NYKEDLSVEETILLALNALKVTLKPGEKLGPG 212
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSA5_TRYBB (Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.067e-22 Identity = 69/212 (32.55%), Postives = 99/212 (46.70%), Query Frame = 2 Query: 71 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTL-----------YWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKT 673 M S T YD V TFSP+GR+FQIEYA +A+ T +GI+ D +++ EK + S ++ P S +I + H G ++G+ AD R +V A+ EA N+ Y EP+ V+ A + C L RPFG +++ G D +GPQL+ +PSG RY AIG G AA+T Sbjct: 1 MFSSKTEYDRGVNTFSPEGRIFQIEYAIEAIKLGS---------------------------TSLGIQTPDAVIIAAEKRVPSTLVDPSSVNKILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCA------LATCDLSVQFGESGGRKKLMSRPFGVSLLIAGVDENGPQLWQTDPSGTYTRYDAQAIGGGAEAAQT 179
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSA2_DROME (Proteasome subunit alpha type-2 OS=Drosophila melanogaster GN=Pros25 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.067e-22 Identity = 64/198 (32.32%), Postives = 94/198 (47.47%), Query Frame = 2 Query: 92 YDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGK 685 Y S+TTFSP G++ Q+EYA AV +GI +G+V+ E S + S R+ ++ H GM +G+ D R +V +A+ A Y Y EPIPV +L QRVA+ + T +RPFG +++ G+D D P LY +PSG + + TA+GK KT + K Sbjct: 6 YSFSLTTFSPSGKLVQLEYALAAVSGGA---------------------------PSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEK 176
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 3.106e-22 Identity = 65/216 (30.09%), Postives = 111/216 (51.39%), Query Frame = 2 Query: 92 YDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPG-SNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRD-GPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGKFEAFRNDLPNKGFIEL 733 YD T FSP+GR++Q+EYA +A+ N+G + IGI KDG+V+ EK + SK++ S+ +++ + H AVAG+ +D ++ A+ +A Y Y EP+PV++L Q + T Y L PFG + G+D++ G QL+M +PSG + AIG AA++ + + +++D+ + ++L Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAG---------------------------SAIGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLK--QDYKDDITREEAVQL 191
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSA2_RAT (Proteasome subunit alpha type-2 OS=Rattus norvegicus GN=Psma2 PE=1 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 3.106e-22 Identity = 65/199 (32.66%), Postives = 96/199 (48.24%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGK 685 GY S+TTFSP G++ QIEYA AV +GIK +G+V+ EK S + S ++ + +H G+ +G+ D R +V RA+ A Y VY EPIP +L QRVAS + T +RPFG +++ G++ P L+ +PSG + + TA+GK KT + K Sbjct: 5 GYSFSLTTFSPSGKLVQIEYALAAVAGGA---------------------------PSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEK 176
BLAST of DY260441 vs. ExPASy Swiss-Prot
Match: PSA2_MOUSE (Proteasome subunit alpha type-2 OS=Mus musculus GN=Psma2 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 3.106e-22 Identity = 65/199 (32.66%), Postives = 96/199 (48.24%), Query Frame = 2 Query: 89 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG*VXXXXXXXXXXXXXXXXXXXXXXARRTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGTAIGKGRPAAKTEIGK 685 GY S+TTFSP G++ QIEYA AV +GIK +G+V+ EK S + S ++ + +H G+ +G+ D R +V RA+ A Y VY EPIP +L QRVAS + T +RPFG +++ G++ P L+ +PSG + + TA+GK KT + K Sbjct: 5 GYSFSLTTFSPSGKLVQIEYALAAVAGGA---------------------------PSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEK 176 The following BLAST results are available for this feature:
BLAST of DY260441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260441 ID=DY260441; Name=DY260441; organism=Citrus clementina; type=EST; length=1052bpback to top |