DY260443

Overview
NameDY260443
Unique NameDY260443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1203
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260443 vs. ExPASy Swiss-Prot
Match: CALS8_ARATH (Putative callose synthase 8 OS=Arabidopsis thaliana GN=CALS8 PE=3 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.279e-36
Identity = 81/165 (49.09%), Postives = 108/165 (65.45%), Query Frame = 2
Query:   71 ELRFWASYRAQTLARTVRGMMYYRKALMLQAYLERMTSGDTEAALSSLDASDTQGFELSREARAHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRNEALRVAFIDDVETLKDGKVHREFYSKLVKGDINGKDKEIYSIKLPGNPKLGEGKPENQNPAVIFT 565
            ELR WAS+R QTL+RTVRGMMY R+AL LQA+L+     D E  L      +     L+ +  A AD+KFTYVV+ Q++G QK    P A DI  LM +  +LRVA++++ E +      + +YS LVK  +NG D+EIY +KLPG P +GEGKPENQN A++FT
Sbjct: 1202 ELRNWASFRGQTLSRTVRGMMYCREALKLQAFLDM---ADDEDILEGYKDVERSNRPLAAQLDALADMKFTYVVSCQMFGAQKSSGDPHAQDILDLMIKYPSLRVAYVEEREEIVLDVPKKVYYSILVKA-VNGFDQEIYRVKLPGPPNIGEGKPENQNHAIVFT 1362          

HSP 2 Score: 28.4906 bits (62), Expect = 1.279e-36
Identity = 16/33 (48.48%), Postives = 19/33 (57.58%), Query Frame = 1
Query:  643 LNNFLLIQVYVPLPFLGVREHVFPWSVLSLALF 741
            L  FL  +   P   LG+REH+F  SV SLA F
Sbjct: 1388 LQEFLRNRGRRPPTILGLREHIFTGSVSSLAWF 1420          
BLAST of DY260443 vs. ExPASy Swiss-Prot
Match: CALSB_ARATH (Callose synthase 11 OS=Arabidopsis thaliana GN=CALS11 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.051e-28
Identity = 84/194 (43.30%), Postives = 110/194 (56.70%), Query Frame = 2
Query:   65 ILELRFWASYRAQTLARTVRGMMYYRKALMLQAYLE-------RMTSGDTEAALSSLDASD--------TQGFELSREAR-----------AHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRNEALRVAFIDDVETLKDGKVHREFYSKLVKGDIN-GKDKEIYSIKLPGNPKLGEGKPENQNPAVIFT 565
            + +LR WASYR QTL+RTVRGMMYY  AL   A+L+       RM +     A  S   +D        T   E+SR A              A +KFTYVV  Q+YG+ K      A +I  LM+ ++ALR+A++D+V+    G+   E+YS LVK D    ++ EIY I+LPG  KLGEGKPENQN A+IFT
Sbjct:  967 VRDLRLWASYRGQTLSRTVRGMMYYYSALKKLAFLDSASEMDIRMGTQIAPEARRSYYTNDGGDNTLQPTPSQEISRMASGITHLLKGSEYGSAMMKFTYVVACQVYGQHKARGDHRAEEILFLMKNHDALRIAYVDEVDL---GRGEVEYYSVLVKFDQQLQREVEIYRIRLPGPLKLGEGKPENQNHALIFT 1157          
BLAST of DY260443 vs. ExPASy Swiss-Prot
Match: FKS3_YEAST (1,3-beta-glucan synthase component FKS3 OS=Saccharomyces cerevisiae GN=FKS3 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.151e-20
Identity = 61/174 (35.06%), Postives = 89/174 (51.15%), Query Frame = 2
Query:   56 PSDILELRFWASYRAQTLARTVRGMMYYRKALMLQAYLERMTSGDTEAALSSLDASDTQGFELSREARAHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRNEALRVAFIDDVETLKDGKVHREFYSKLVKG-----DINGKDKEIYSIKLPGNPKLGEGKPENQNPAVIF 562
            PS  L  R WAS R QTL RT+ G M Y KA+ L   +E         +L SL   + +  E   E  A    KF  VV  Q Y K  +D+  EA ++ L    N  + ++++  +E L+  +  + +YS L  G     + +G  K I+ I+L GNP LG+GK +NQN ++IF
Sbjct:  848 PSYTLRTRIWASLRTQTLYRTLSGFMNYSKAIKLLYRIEN-------PSLVSLYRGNNEALENDLENMASR--KFRMVVAMQRYAKFNKDEV-EATELLLRAYPN--MFISYL--LEELEQNESEKTYYSCLTNGYAEFDEESGLRKPIFKIRLSGNPILGDGKSDNQNHSIIF 1007          

HSP 2 Score: 38.891 bits (89), Expect = 5.151e-20
Identity = 23/58 (39.66%), Postives = 34/58 (58.62%), Query Frame = 3
Query:  567 RGNAIQTIDMNQDNYFEEPLKMKNLPEQFPADPGIRPPTIPGGQGTCFPLECPLLSLI 740
            RG  IQ ID NQDNY EE LK++++  +F  +     PTIP   G  +  E P ++++
Sbjct: 1009 RGEYIQVIDANQDNYLEECLKIRSVLSEF--EELELNPTIPYIPGIEYEEEPPPIAIV 1064          
BLAST of DY260443 vs. ExPASy Swiss-Prot
Match: FKS1_YEAST (1,3-beta-glucan synthase component FKS1 OS=Saccharomyces cerevisiae GN=FKS1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 8.704e-20
Identity = 57/174 (32.76%), Postives = 89/174 (51.15%), Query Frame = 2
Query:   53 SPSDILELRFWASYRAQTLARTVRGMMYYRKALMLQAYLERMTSGDTEAALSSLDASDTQGFELSREARAHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRNEALRVAFIDDVETLKDGKVHREFYSKLVKGDI----NGKDKEIYSIKLPGNPKLGEGKPENQNPAVIF 562
            +P   L  R WAS R+QTL RT+ G M Y +A+ L   +E          +  +   + +G E  RE    A  KF ++V+ Q   K K  +   A     L++    L++A++D+   L +G+  R  YS L+ G      NG+ +  + ++L GNP LG+GK +NQN A+IF
Sbjct:  932 APEYTLRTRIWASLRSQTLYRTISGFMNYSRAIKLLYRVEN-------PEIVQMFGGNAEGLE--RELEKMARRKFKFLVSMQRLAKFKPHELENAE---FLLRAYPDLQIAYLDEEPPLTEGEEPR-IYSALIDGHCEILDNGRRRPKFRVQLSGNPILGDGKSDNQNHALIF 1092          

HSP 2 Score: 36.965 bits (84), Expect = 8.704e-20
Identity = 20/45 (44.44%), Postives = 26/45 (57.78%), Query Frame = 3
Query:  567 RGNAIQTIDMNQDNYFEEPLKMKNLPEQF---------PADPGIR 674
            RG  IQ ID NQDNY EE LK++++  +F         P  PG+R
Sbjct: 1094 RGEYIQLIDANQDNYLEECLKIRSVLAEFEELNVEQVNPYAPGLR 1138          
BLAST of DY260443 vs. ExPASy Swiss-Prot
Match: FKS2_YEAST (1,3-beta-glucan synthase component GSC2 OS=Saccharomyces cerevisiae GN=GSC2 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.914e-19
Identity = 57/174 (32.76%), Postives = 88/174 (50.57%), Query Frame = 2
Query:   53 SPSDILELRFWASYRAQTLARTVRGMMYYRKALMLQAYLERMTSGDTEAALSSLDASDTQGFELSREARAHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRNEALRVAFIDDVETLKDGKVHREFYSKLVKGDI----NGKDKEIYSIKLPGNPKLGEGKPENQNPAVIF 562
            +P   L  R WAS R+QTL RT+ G M Y +A+ L   +E          +  +   +  G E  RE    A  KF ++V+ Q   K K  +   A     L++    L++A++D+   L +G+  R  YS L+ G      NG+ +  + ++L GNP LG+GK +NQN A+IF
Sbjct:  951 APEYTLRTRIWASLRSQTLYRTISGFMNYSRAIKLLYRVEN-------PEIVQMFGGNADGLE--RELEKMARRKFKFLVSMQRLAKFKPHELENAE---FLLRAYPDLQIAYLDEEPPLNEGEEPR-IYSALIDGHCEILENGRRRPKFRVQLSGNPILGDGKSDNQNHALIF 1111          

HSP 2 Score: 36.1946 bits (82), Expect = 1.914e-19
Identity = 19/45 (42.22%), Postives = 26/45 (57.78%), Query Frame = 3
Query:  567 RGNAIQTIDMNQDNYFEEPLKMKNLPEQF---------PADPGIR 674
            RG  IQ ID NQDNY EE LK++++  +F         P  PG++
Sbjct: 1113 RGEYIQLIDANQDNYLEECLKIRSVLAEFEELGIEQIHPYTPGLK 1157          
BLAST of DY260443 vs. ExPASy Swiss-Prot
Match: FKS1_ASPNC (1,3-beta-glucan synthase component FKS1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=fksA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.488e-19
Identity = 59/179 (32.96%), Postives = 88/179 (49.16%), Query Frame = 2
Query:   53 SPSDILELRFWASYRAQTLARTVRGMMYYRKALMLQAYLE-----RMTSGDTEAALSSLDASDTQGFELSREARAHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRNEALRVAFIDDVETLKDGKVHREFYSKLVKGDI----NGKDKEIYSIKLPGNPKLGEGKPENQNPAVIF 562
            +P   L  R W+S R+QTL RT+ G M Y +A+ L   +E     +M  G++E              +L RE    A  KF   V+ Q Y K     K E  +   L++    L++A++D+     +G+  R  YS L+ G      NG  K  + I+L GNP LG+GK +NQN ++IF
Sbjct:  963 APEYTLRTRIWSSLRSQTLYRTISGFMNYSRAIKLLYRVENPEVVQMFGGNSE--------------KLERELERMARRKFKICVSMQRYAKFN---KEERENTEFLLRAYPDLQIAYLDEEPPANEGEEPR-LYSALIDGHCELLDNGMRKPKFRIQLSGNPILGDGKSDNQNHSIIF 1123          

HSP 2 Score: 36.5798 bits (83), Expect = 2.488e-19
Identity = 20/44 (45.45%), Postives = 25/44 (56.82%), Query Frame = 3
Query:  567 RGNAIQTIDMNQDNYFEEPLKMKNLPEQF---------PADPGI 671
            RG  IQ ID NQDNY EE LK++++  +F         P  PGI
Sbjct: 1125 RGEYIQVIDANQDNYLEECLKIRSVLAEFEELTTDNVSPYTPGI 1168          
BLAST of DY260443 vs. ExPASy Swiss-Prot
Match: BGS3_SCHPO (1,3-beta-glucan synthase component bgs3 OS=Schizosaccharomyces pombe GN=bgs3 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.564e-18
Identity = 58/173 (33.53%), Postives = 86/173 (49.71%), Query Frame = 2
Query:   53 SPSDILELRFWASYRAQTLARTVRGMMYYRKALMLQAYLERMTSGDTEAALSSLDASDTQGFELSREARAHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRNEALRVAFIDDVETLKDGKVHREFYSKLVKGDI---NGKDKEIYSIKLPGNPKLGEGKPENQNPAVIF 562
            +P   L  R WAS R+QTL RT  GMM Y +AL L   +E+          + LD  D     L  +    A  KF   ++ Q Y K   D+   A     L++ +  L++A++D  +  +DG+   + Y+ L+ G     NG+    Y I+L GNP LG+GK +NQN A+ F
Sbjct:  909 APEYTLRTRIWASLRSQTLYRTASGMMNYSRALKLLYRVEQP---------NLLDDCDGNFERLEHQLEQMAYRKFRLCISMQRYAKFNRDEYENA---EFLLRAHPELQIAYLDQ-DPSEDGE-EPKVYATLINGFCPFENGRRLPKYRIRLSGNPILGDGKADNQNMALPF 1067          

HSP 2 Score: 36.5798 bits (83), Expect = 1.564e-18
Identity = 15/29 (51.72%), Postives = 21/29 (72.41%), Query Frame = 3
Query:  567 RGNAIQTIDMNQDNYFEEPLKMKNLPEQF 653
            RG  +Q ID NQDNY EE +K++N+  +F
Sbjct: 1069 RGEYLQLIDANQDNYIEECMKIRNVLSEF 1097          
BLAST of DY260443 vs. ExPASy Swiss-Prot
Match: BGS1_SCHPO (1,3-beta-glucan synthase component bgs1 OS=Schizosaccharomyces pombe GN=bgs1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.159e-17
Identity = 57/177 (32.20%), Postives = 81/177 (45.76%), Query Frame = 2
Query:   53 SPSDILELRFWASYRAQTLARTVRGMMYYRKALMLQAYLE-----RMTSGDTEAALSSLDASDTQGFELSREARAHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRNEALRVAFIDDVETLKDGKVHREFYSKLVKGDI----NGKDKEIYSIKLPGNPKLGEGKPENQNPAV 556
            +P   L  R WAS R QTL RT+ G   Y +A+ L    E       T+GD                 L  E    A+ KF + V+ Q Y K     K EA +   L++    L++A++D+    +     R  YS L+ G      NGK +  Y I+L GNP LG+GK +NQN ++
Sbjct:  813 TPEYTLRTRIWASLRTQTLYRTINGFSNYSRAIKLLYRTETPELVEWTNGDP--------------VRLDEELDLMANRKFRFCVSMQRYAKFT---KEEAENAEFLLRAYPDLQIAYMDEDPQSRHND-ERHLYSVLIDGHCPIMENGKRRPKYRIRLSGNPILGDGKSDNQNMSI 971          

HSP 2 Score: 35.8094 bits (81), Expect = 2.159e-17
Identity = 15/29 (51.72%), Postives = 21/29 (72.41%), Query Frame = 3
Query:  567 RGNAIQTIDMNQDNYFEEPLKMKNLPEQF 653
            RG  +Q ID NQDNY EE LK++++  +F
Sbjct:  975 RGEYVQMIDANQDNYLEECLKIRSILAEF 1003          
BLAST of DY260443 vs. ExPASy Swiss-Prot
Match: BGS2_SCHPO (1,3-beta-glucan synthase component bgs2 OS=Schizosaccharomyces pombe GN=bgs2 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.201e-14
Identity = 61/174 (35.06%), Postives = 87/174 (50.00%), Query Frame = 2
Query:   53 SPSDILELRFWASYRAQTLARTVRGMMYYRKALMLQAYLERMTSGDTEAALSSLDASDTQGFELSREARAHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRNEALRVAFIDDVETLKDGKVHREFYSKLVKG----DINGKDKEIYSIKLPGNPKLGEGKPENQNPAVIF 562
            +P   L  R WAS R+QTL RTV G M Y +A+ L   L R+ + D           D   +EL R A      KF   V+ Q Y K   D   E  +   +++    L +A++D+ +  K+G+   + Y+ L+ G    D N K K  Y IKL GNP LG+GK +NQN ++ F
Sbjct:  971 TPEYTLRTRIWASLRSQTLYRTVSGFMNYSRAIKL---LYRVENPDVAQLFEG--QMDVLEYELDRMASR----KFKMCVSMQRYAKFTAD---EIENTEFILRAYPDLLIAYLDE-DPPKEGETTPQLYAALIDGYSELDENKKRKPKYRIKLSGNPILGDGKSDNQNLSLPF 1131          
BLAST of DY260443 vs. ExPASy Swiss-Prot
Match: BGS4_SCHPO (1,3-beta-glucan synthase component bgs4 OS=Schizosaccharomyces pombe GN=bgs4 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.589e-12
Identity = 56/178 (31.46%), Postives = 86/178 (48.31%), Query Frame = 2
Query:   56 PSDILELRFWASYRAQTLARTVRGMMYYRKALMLQAYLE-----RMTSGDTEAALSSLDASDTQGFELSREARAHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRNEALRVAFIDDVETLKDGKVHREFYSKLVKGDI----NGKDKEIYSIKLPGNPKLGEGKPENQNPAVIF 562
            P   L  R WAS R+QTL RT+ G M Y +A+ L   +E     +M  G+T+               L RE    A  KF  VV+ Q Y K     K E  +   L++    L++A++D+    ++G    + ++ L+ G      N + +  Y I+L GNP LG+GK +NQN ++ F
Sbjct:  996 PEYTLRTRIWASLRSQTLYRTISGFMNYSRAIKLLYRVENPEIVQMFGGNTD--------------RLERELDRMARRKFKLVVSMQRYAK---FTKEEYENAEFLLRAYPDLQIAYLDEDPPEEEG-AEPQLFAALIDGHSEIMENERRRPKYRIRLSGNPILGDGKSDNQNMSLPF 1155          
The following BLAST results are available for this feature:
BLAST of DY260443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
CALS8_ARATH1.279e-3649.09Putative callose synthase 8 OS=Arabidopsis thalian... [more]
CALSB_ARATH2.051e-2843.30Callose synthase 11 OS=Arabidopsis thaliana GN=CAL... [more]
FKS3_YEAST5.151e-2035.061,3-beta-glucan synthase component FKS3 OS=Sacchar... [more]
FKS1_YEAST8.704e-2032.761,3-beta-glucan synthase component FKS1 OS=Sacchar... [more]
FKS2_YEAST1.914e-1932.761,3-beta-glucan synthase component GSC2 OS=Sacchar... [more]
FKS1_ASPNC2.488e-1932.961,3-beta-glucan synthase component FKS1 OS=Aspergi... [more]
BGS3_SCHPO1.564e-1833.531,3-beta-glucan synthase component bgs3 OS=Schizos... [more]
BGS1_SCHPO2.159e-1732.201,3-beta-glucan synthase component bgs1 OS=Schizos... [more]
BGS2_SCHPO2.201e-1435.061,3-beta-glucan synthase component bgs2 OS=Schizos... [more]
BGS4_SCHPO4.589e-1231.461,3-beta-glucan synthase component bgs4 OS=Schizos... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YI02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260443 ID=DY260443; Name=DY260443; organism=Citrus clementina; type=EST; length=1203bp
CCTTTCTCGAATTGTTTGTGATGAAAATTCGCAAGACACTGAACTTTTTG
ATAGTCCTAGTGATATCCTTGAACTTCGATTTTGGGCCTCATATCGCGCA
CAGACATTAGCCAGAACAGTTCGGGGGATGATGTATTATAGAAAAGCTCT
TATGCTTCAGGCCTATTTAGAAAGAATGACCTCTGGAGATACGGAAGCCG
CGCTTTCCAGTCTTGATGCATCTGATACTCAAGGTTTTGAGTTGTCTCGT
GAAGCTCGGGCTCATGCAGATCTTAAGTTTACATATGTTGTTACAAGTCA
AATTTACGGAAAACAGAAAGAGGACCAAAAACCTGAGGCTGCTGATATTG
CACTGCTGATGCAAAGAAATGAAGCTCTTCGCGTTGCTTTCATTGATGAT
GTTGAAACACTGAAGGATGGTAAAGTGCATAGGGAATTCTACTCAAAGCT
TGTAAAGGGCGATATCAATGGGAAAGATAAGGAAATCTACTCCATAAAAT
TGCCTGGAAATCCAAAACTTGGTGAAGGGAAACCAGAGAACCAAAACCCT
GCAGTAATATTTACCACGAGGAAATGCCATTCAAACCATTGACATGAATC
AGGACAATTACTTTGAGGAACCCTTGAAGATGAAAAATCTTCCTGAACAA
TTTCCTGCTGATCCAGGTATACGTCCCCCTACCATTCCTGGGGGTCAGGG
AACATGTTTTCCCCTGGAGTGTCCTCTCCTTAGCCTTATTTTATGTCCCA
CCCAAAAAACCCCTTTTTGTCCCCCCTGGGCCGCCCGGGTTTGGCCCAAC
ACCCCCCCAACGCCCTCAACCCCATTTGGCGCCCCCCGACGCCTTTACCA
CACGTTCTCCCTTCTAACAGCGCGGCCGGCCCCACCCCAAACCCCCCTCG
GCTACCCAAAATAAATCAAAACCACTCCAACGACCACTCTTACCACCCCA
ACTGCCGAACGAGCGTACCTGCTTCCTCCGCCCACCCATTTGCCTCAAGG
GCATACCCTATCGGCCGGGCTCGGCCCTATCCCCGCCCCCCCCCCCCACC
TGGCCTGCCGCGCTCGCCGCCCGCCTTCCTGACCGCCACTCTCTCCTCAC
CTCACCCTCCCACTCTCTAACCCATCGCCCCCACCCTATCCGCGCCACCC
ACTTCGTCCCGTCTTCACGGTCAGCTACGCCTCACAGGCGGGCCCCGCAC
ACG
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