DY260491

Overview
NameDY260491
Unique NameDY260491
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1299
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_NEIMB (Inorganic pyrophosphatase OS=Neisseria meningitidis serogroup B GN=ppa PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.247e-18
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 2
Query:  281 IFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADD 574
            I NVV EI  GS  K E ++K    ++DR+  +    P NYGFIP+TL ED D +DVL++ ++P+  G FL A+ IG+M  +D GE DDKI+ V ADD
Sbjct:   17 IINVVNEIPAGSNHKIEWNRKLAAFQLDRVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGEVDDKIVCVPADD 114          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_NEIMA (Inorganic pyrophosphatase OS=Neisseria meningitidis serogroup A GN=ppa PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.247e-18
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 2
Query:  281 IFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADD 574
            I NVV EI  GS  K E ++K    ++DR+  +    P NYGFIP+TL ED D +DVL++ ++P+  G FL A+ IG+M  +D GE DDKI+ V ADD
Sbjct:   17 IINVVNEIPAGSNHKIEWNRKLAAFQLDRVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGEVDDKIVCVPADD 114          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_CORGL (Inorganic pyrophosphatase OS=Corynebacterium glutamicum GN=ppa PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.247e-18
Identity = 44/97 (45.36%), Postives = 66/97 (68.04%), Query Frame = 2
Query:  290 VVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADDPR 580
            V VEI KGS+ KYE+D +TG + +DR L++ + YP +YG+I  TL ED DP+D L+++ E V P   ++++ IG+  M D    DDK+++V  DDPR
Sbjct:    5 VTVEIPKGSRNKYEIDHETGKVYLDRYLFTPMAYPLDYGYIDHTLGEDGDPLDALVILPESVFPAVVVKSRIIGVFKMTDEAGGDDKLLSV-LDDPR 100          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_RICFE (Inorganic pyrophosphatase OS=Rickettsia felis GN=ppa PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.628e-18
Identity = 43/93 (46.24%), Postives = 64/93 (68.82%), Query Frame = 2
Query:  287 NVVVEISKG-SKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAV 562
            NV++EI      +KYE DK++G + VDR + +++ YP NYGFIP TL  D DP+DVL++   PV+PG  ++ +A+G++ M D    D+KIIAV
Sbjct:   16 NVIIEIPMNIGPIKYEFDKESGAVFVDRFMQTTMSYPCNYGFIPHTLSNDGDPVDVLVVAHHPVVPGSVIKCRAVGVLMMEDESGLDEKIIAV 108          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_HELPJ (Inorganic pyrophosphatase OS=Helicobacter pylori J99 GN=ppa PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.628e-18
Identity = 46/106 (43.40%), Postives = 69/106 (65.09%), Query Frame = 2
Query:  254 LEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCAD 571
            LE+   A ++  VV+EISK S +KYELDK++G + VDR+LY +  YP NYGF+P TL  D DP+D L+L       G  ++A+ +G++ M D    D+K++A+  D
Sbjct:    6 LEVSHDADSLC-VVIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLLALPID 110          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR1_PSESM (Inorganic pyrophosphatase 1 OS=Pseudomonas syringae pv. tomato GN=ppa1 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.778e-18
Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 2
Query:  263 GPGAPTIFNVVVEI-SKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCAD 571
            G   P    V +EI +  + +KYE+DK T  + VDR + + + YP NYGFIP TL +D DP+DVL++   PV PG  +RA+ +G++ M D G  D K+IAV  D
Sbjct:    9 GKDLPNDIYVAIEIPANHAPIKYEIDKDTDCLFVDRFMATPMFYPANYGFIPNTLADDGDPLDVLVVTPYPVTPGSVIRARPVGILHMTDDGGGDAKVIAVPHD 112          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_PSEPK (Inorganic pyrophosphatase OS=Pseudomonas putida (strain KT2440) GN=ppa PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.056e-17
Identity = 45/104 (43.27%), Postives = 65/104 (62.50%), Query Frame = 2
Query:  263 GPGAPTIFNVVVEI-SKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCAD 571
            G   P    V +EI +  + +KYE+DK +  + VDR + + + YP NYGFIP TL +D DP+DVL++   PV PG  +RA+ +G++ M D G  D K+IAV  D
Sbjct:    9 GKDLPNDIYVAIEIPANHAPIKYEIDKDSDTLFVDRFMATPMFYPANYGFIPNTLADDGDPLDVLVVTPYPVAPGSVIRARPVGVLNMTDDGGGDAKVIAVPHD 112          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_RHORT (Inorganic pyrophosphatase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=ppa PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.379e-17
Identity = 42/104 (40.38%), Postives = 69/104 (66.35%), Query Frame = 2
Query:  254 LEIGPGAPTIFNVVVEISK-GSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAV 562
            + +G   P   NV++EI      VKYE+DK++G + VDR L++++ YP NYGF+P TL +D DP+DV+++ + PV  G  +R + +G++ M D   +D+KI+ V
Sbjct:    6 IPVGKNPPQDVNVIIEIPLLADPVKYEVDKESGAMFVDRFLHTAMHYPCNYGFVPHTLSDDGDPVDVMVVGRIPVAVGSVMRTRPVGVLYMEDEAGRDEKILGV 109          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_PSEAE (Inorganic pyrophosphatase OS=Pseudomonas aeruginosa GN=ppa PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.800e-17
Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 2
Query:  263 GPGAPTIFNVVVEI-SKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCAD 571
            G   P    V +EI +  + +KYE+DK T  + VDR + + + YP NYGFIP TL +D DP+DVL++   PV PG  +RA+ +G++ M D    D K+IAV  D
Sbjct:    9 GKDLPNDIYVAIEIPANHAPIKYEIDKDTDCLFVDRFMATPMFYPANYGFIPNTLADDGDPLDVLVVTPYPVAPGSVIRARPVGVLHMTDEAGGDAKLIAVPHD 112          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_BUCAI (Inorganic pyrophosphatase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ppa PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.184e-16
Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 2
Query:  263 GPGAPTIFNVVVEISKGSK-VKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAV 562
            G   P    V++EIS  S  +KYE+DKK+G++ VDR + + + YP NYG+I  TL  D DP+DVL+    P+   C +  K IG++ M D    D KIIAV
Sbjct:    9 GDDIPNDIYVIIEISSNSSPIKYEVDKKSGMLFVDRFIPTPMFYPCNYGYINHTLSLDGDPLDVLVPSHYPIKSSCVIHCKPIGILNMQDESGDDAKIIAV 109          

HSP 2 Score: 21.557 bits (44), Expect = 1.184e-16
Identity = 11/33 (33.33%), Postives = 17/33 (51.52%), Query Frame = 3
Query:  579 EYKPYNDIKSFPLLVLPRSFLSFENY*KNDKQR 677
            EYK  NDI     L+  +    F+NY   +K++
Sbjct:  117 EYKNINDISDISELLKKQITHFFQNYKTLEKEK 149          
The following BLAST results are available for this feature:
BLAST of DY260491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
IPYR_NEIMB1.247e-1847.96Inorganic pyrophosphatase OS=Neisseria meningitidi... [more]
IPYR_NEIMA1.247e-1847.96Inorganic pyrophosphatase OS=Neisseria meningitidi... [more]
IPYR_CORGL1.247e-1845.36Inorganic pyrophosphatase OS=Corynebacterium gluta... [more]
IPYR_RICFE1.628e-1846.24Inorganic pyrophosphatase OS=Rickettsia felis GN=p... [more]
IPYR_HELPJ1.628e-1843.40Inorganic pyrophosphatase OS=Helicobacter pylori J... [more]
IPYR1_PSESM2.778e-1844.23Inorganic pyrophosphatase 1 OS=Pseudomonas syringa... [more]
IPYR_PSEPK1.056e-1743.27Inorganic pyrophosphatase OS=Pseudomonas putida (s... [more]
IPYR_RHORT1.379e-1740.38Inorganic pyrophosphatase OS=Rhodospirillum rubrum... [more]
IPYR_PSEAE1.800e-1743.27Inorganic pyrophosphatase OS=Pseudomonas aeruginos... [more]
IPYR_BUCAI1.184e-1643.56Inorganic pyrophosphatase OS=Buchnera aphidicola s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YK15FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260491 ID=DY260491; Name=DY260491; organism=Citrus clementina; type=EST; length=1299bp
TTAATCATGCCAAAACATTAATATATTATAGATGGCAATAGATCCATTGC
TGTATCACTCTATGAATCTCCTCTCAAGATTACACCTACAGTAAGTGATT
ATATGTTATGTTGGGGCAGAGATGAGTGAGGAGGCGGCGCATGGAGATGG
AAGTGAAGCTGTTGAAGCTCCACAGGGTTCAGTTCCTCGGCTGAACGAGA
GGATCCTCTCATCTATGTCGAGGAGATCAGTTGCTGCACATCCTTGGCAT
GATCTTGAAATTGGACCTGGAGCTCCCACCATCTTCAATGTTGTTGTTGA
GATATCAAAGGGAAGTAAGGTCAAATATGAACTTGACAAGAAAACAGGAT
TGATTAAGGTTGATCGAATTCTTTATTCCTCTGTGGTCTATCCTCATAAC
TATGGTTTCATCCCTCGCACATTATGTGAAGATAATGATCCAATGGATGT
TTTGATTCTTATGCAGGAGCCAGTCCTTCCCGGATGTTTCCTGCGGGCCA
AGGCTATTGGATTAATGCCCATGATTGATCACGGAGAAAAAGATGATAAG
ATCATTGCAGTTTGTGCCGATGATCCCAGAGTATAAGCCCTACAATGACA
TCAAGAGCTTCCCCCTCCTCGTCCTTCCAAGATCCTTCCTTTCTTTTGAA
AACTACTAGAAAAATGACAAACAAAGGAGGTAGCCGTTTAATGAATCTTT
CCCTTCTTCCGCTGCTGTTGAACCCTCCCCCACCTCAAAGGAACCCTTTA
TCCCGAGAAATTTCTCGCCCCACCCCAACCCGTCAGGCACTTTCCCCTTT
CCCTTCCCTCCCCCCACCTCTTTTCATCACCACTGGACCTTCCACCCTCC
TTACACCTCTCCTTTTCCCCCTCCCTCCTCGAACACGATAACACCACCGC
CCACCACCCCCTACTCGGCACCCACCCCCACCAACCCCCCTGCCCCCCCC
TCCTCACCCACCAATCACCCCCCGCACCTCACCCACAGCCTCCTACCTCT
CACCCCCCCACCACACAAAAACTACAACAATCAAAAACCAGCAACCCTCT
ACCGCCCTCCAATACCTGCCCCCTTCTTCCCTCGCCTCCTCCTCTGGAAT
CCTTGCATCCCGTTTCGTACTTGCCTGCCCCGCATTCTTTCACTCTCCGC
AATAAATTCTGACATATCGCCTCGAGCCCATCCCTACTGCTTTCCACCTC
CTCCTCTCCCTCTCATACTTCAGATCCTCTCCCCGCTCACCTCCTCCCGC
ACCCCTCTACCATACGCACCTTCATATGCTTTCTCTCTCAGCTTCAGTT
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