DY262442

Overview
NameDY262442
Unique NameDY262442
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1264
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262442 vs. ExPASy Swiss-Prot
Match: CP17A_CAPHI (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra hircus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.429e-11
Identity = 63/294 (21.43%), Postives = 127/294 (43.20%), Query Frame = 1
Query:  166 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVN-SFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEW-VWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNKDFIDVLRKVQKS--------DHLDVPLTDNNLWLLFRKSFLAGVQPSTATLKWIM 1017
            ++G L    +  + H++F KL EK GPI+  +LG    V++   +LA++VL    + F+ RP + +   +S     + F+ +G +W+  RK+ +      K  N   + ++++E N     +  + G   D+S+ +    T+      F   F   ++E    K + +V   + E+L+     D F    ++P          ++    LLN   EI +K  +         F      + + +L + + +        D     L++ ++       F AGV+ +T+ +KWI+
Sbjct:   36 LVGSLLFLPRRGQQHENFFKLQEKYGPIYSFRLGSKTTVMIGHHQLAREVLLKKGKEFSGRPKVATLDILSDNQKGIAFADHGAHWQLHRKLVLNAFALFKDGNLKLEKIINQEANVLCDFLATQHGQSIDLSEPLSLAVTNIISFICFNFSF---KNEDPALKAIQNVNDGILEVLSKEILLDIFPALKIFPSKAMEKMKGCVETRNELLN---EILEKCQEN--------FTSDSITNLLHILMQAKVNADNNNAGPDQDSKLLSNRHMLATIADIFGAGVETTTSVIKWIV 315          
BLAST of DY262442 vs. ExPASy Swiss-Prot
Match: CP17A_MESAU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocricetus auratus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.173e-11
Identity = 64/296 (21.62%), Postives = 130/296 (43.92%), Query Frame = 1
Query:  166 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVN-SFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDK-TSKRKQPLGTGAFLLHGNKDFIDVLRKVQKSDHLD----------VPLTDNNLWLLFRKSFLAGVQPSTATLKWIM 1017
            ++G L    +   PH +F KL EK GPI+ ++LG    V++   +LAK+VL    + F+ RP +++   +S     + F+ +G  W+  RK+ ++     +  N   + ++ ++ +     +        D+S+ IF   T+  C+  FG+ + E+ D       LA++    E +L     G+     ++P WLT +  + +   +  +   DE+      K K+   + +         +D+L  +Q   + D             +D ++       F AG++ + + L WI+
Sbjct:   36 LVGSLPFIPRHGHPHVNFFKLQEKYGPIYSLRLGSTTTVIIGQYQLAKEVLVKKGKEFSGRPHMVTLGLLSDQGKGIAFADSGGSWQLHRKLALSSFALFRDGNQKLEKIICQKASSLCDFLLTHNEESIDLSEPIFNSITNIICIICFGISY-ENRD-----PILATIKSFTEGILNSL--GNDHLVDIFP-WLTIFPNKTVDMIKKNVKIRDEVLSGILEKCKEKFNSDSI-----SSLMDLL--IQAKTNADNNNTSEGQGSNAFSDMHILATIADIFGAGIETTASVLSWII 315          
BLAST of DY262442 vs. ExPASy Swiss-Prot
Match: CP17A_FELCA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Felis catus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.173e-11
Identity = 41/153 (26.80%), Postives = 73/153 (47.71%), Query Frame = 1
Query:  166 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICV-TELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRF 621
            ++G L    +   PHK+F KL +K GPI+  +LG    V+V   +LAK+VL    + F+ RP +++   +S     + F+ +G  W+  RK+ + T  L        + ++  E++     +  + G   D+   +F   T+  CL  F   F
Sbjct:   36 LVGSLLFLPRSGHPHKNFFKLQKKYGPIYSFRLGTKTTVMVGDHQLAKEVLVKKGKEFSGRPHVVTLDILSDNQKGIAFADHGASWQMHRKLALATFALFKDGDQRLEKIICREISLLCDNLAMQDGQSIDLYLPLFLAVTNIICLICFNSSF 188          
BLAST of DY262442 vs. ExPASy Swiss-Prot
Match: CP17A_SHEEP (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ovis aries GN=CYP17A1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 4.144e-11
Identity = 62/291 (21.31%), Postives = 128/291 (43.99%), Query Frame = 1
Query:  166 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVN-SFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLNAVDEIFDKTSKRKQPLGTGAFLLHGNKDFIDVLRKVQKSDHLDVP------LTDNNLWLLFRKSFLAGVQPSTATLKWIM 1017
            ++G L    +  + H++F KL EK GPI+  +LG    V++   +LA++VL    + F+ RP + +   +S     + F+ +G +W+  RK+ +      K  N   + ++++E N     +  + G   D+S+ +    T+      F   F   ++E    K + +V   + E+L      D F        L  +  + ++  +  +   +E+  +  ++ Q   T   +   N   I +  KV   ++   P      L++ ++       F AGV+ +T+ +KWI+
Sbjct:   36 LVGSLPFLPRRGQQHENFFKLQEKYGPIYSFRLGSKTTVMIGHHQLAREVLLKKGKEFSGRPKVATLDILSDNQKGIAFADHGAHWQLHRKLVLNAFALFKDGNLKLEKIINQEANVLCDFLATQHGQSIDLSEPLSLAVTNIISFICFNFSF---KNEDPALKAIQNVNDGILEVLGKEVLLDIFPA------LKIFPSKAMEKMKGCVETRNELLSEILEKCQENFTSDSIT--NLLHILMQAKVNADNNNTGPEQDSKLLSNRHMLATIADIFGAGVETTTSVIKWIV 315          
BLAST of DY262442 vs. ExPASy Swiss-Prot
Match: CP17A_MOUSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus musculus GN=Cyp17a1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.144e-11
Identity = 61/287 (21.25%), Postives = 120/287 (41.81%), Query Frame = 1
Query:  166 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLL-NAVDEIFDKTSKR--KQPLGTGAFLLHGNKDFIDVLRKVQKSDHLDVPLTDNNLWLLFRKSFLAGVQPSTATLKWIM 1017
            ++G L    +    H +F KL EK GPI+ ++LG   AV+V   +LA++VL    + F+ RP +++   +S     V F+ +   W+  RK+  +     +     + ++ +E N     +    G   D+S LIF    +  C   F + F        K   L ++    E ++    + D    + W          +IK    +    + E+F+K  ++   + L +   +L   K   +     +  D      +D ++ +     F AG++ +++ L WI+
Sbjct:   36 LVGSLPFLPRRGHMHANFFKLQEKYGPIYSLRLGTTTAVIVGHYQLAREVLVKKGKEFSGRPQMVTLGLLSDQGKGVAFADSSSSWQLHRKLVFSTFSLFRDDQKLEKMICQEANSLCDLILTYDGESRDLSTLIFKSVINIICTICFNISF------ENKDPILTTIQTFTEGIVDVLGHSDLVDIFPWLKIFPNKNLEMIKEHTKIREKTLVEMFEKCKEKFNSESLSSLTDILIQAKMNAENNNTGEGQD--PSVFSDKHILVTVGDIFGAGIETTSSVLNWIL 314          
The following BLAST results are available for this feature:
BLAST of DY262442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
CP17A_CAPHI2.429e-1121.43Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra ... [more]
CP17A_MESAU3.173e-1121.62Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocr... [more]
CP17A_FELCA3.173e-1126.80Steroid 17-alpha-hydroxylase/17,20 lyase OS=Felis ... [more]
CP17A_SHEEP4.144e-1121.31Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ovis a... [more]
CP17A_MOUSE4.144e-1121.25Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AA01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262442 ID=DY262442; Name=DY262442; organism=Citrus clementina; type=EST; length=1264bp
AGCGAGTAGAGAGGAAATTAAGTTGAGGGACTAATGGCCAACTTTAGCCC
CGAAATCCTCTTTCTGTCATTCGTTGTCTCGACGGCAATCCTCTACATGA
TTAATAATCGGCGAAGGTCACTGCCAAATTCACCGTCACTGCCGTCACCA
CCAAACAAACTTCCGATAATAGGTCACCTTCATCTCTTCTACAAAGAGCG
CAAGCCACATAAAAGTTTCGCTAAACTCGCAGAGAAGCTGGGTCCCATAT
TTTACATCCAGCTCGGCCGAGTCCCCGCCGTTGTAGTCTCCTCTAAAGAG
CTGGCCAAACAAGTTCTCAAAACTCACGACCAGGTCTTCGCCAGCCGCCC
AAGCATCCTCAGCGCCAAGCACGTCTCCGTCGGCCCCGCTGACGTCACCT
TCTCCCCCAACGGCCCTTACTGGCGCCAAGCTCGCAAGATCTGCGTCACC
GAGTTACTCAGCCCAAAACGAGTCAACTCTTTCAAAGTCGTCCTAGATGA
GGAAGTGAACCGGTTTATGAGCCGCGTGAAAGCCCGCTGTGGGTTAGAAA
CAGACATGAGTGATCTTATTTTCGCCTTCTGTACTGATTTCTTTTGCCTT
GCAGCATTTGGGGTGAGGTTCATGGAAGATGAAGACGAAGGGCAAAAGAG
TAAATACTTGGCGAGTGTTTTCATAGAGGTTGAAGAGTTGCTGACAGGGT
TTTATTATGGGGATTTTTTCTCGGAGTGGGTTTGGCCCGGCTGGCTCACT
GGGTACACACCTAGGGTGATCAAGGGTTCTCGGAACTTGTTGAATGCTGT
TGATGAGATTTTCGATAAGACTTCCAAGAGGAAGCAGCCGCTGGGTACCG
GCGCATTCTTATTGCACGGTAATAAAGATTTTATTGATGTTTTGCGTAAA
GTCCAAAAAAGCGACCATTTGGATGTGCCCCTCACTGACAACAATCTTTG
GCTATTGTTTCGGAAAAGTTTCTTGGCGGGAGTTCAACCGTCGACAGCAA
CACTAAAATGGATAATGAACGATCTGGGCTAAGCACCCAAAAATGGAGAA
AAAAGCACAGGAAAAAAATTTCAAACCTAATTACTGCCTTCTGGGAAGTG
GGGAAATTTGAAGAAAAACCCATTCTATCAACTCAAATAAAAAGAAAAGC
GTGTGTAAAAAGGAAGTTAAAGGAAAAATAACACCCCAATTTAAAATTTT
TATTGAATTTCCAAAAAAAGACCCCCCTCCAAAAAAATAAACACCCACCT
TTTGTAAGAAAGGC
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