DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_RICPU (Ribonuclease 3 OS=Rickettsia peacockii (strain Rustic) GN=rnc PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11 Identity = 51/197 (25.89%), Postives = 89/197 (45.18%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSS------YTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD-----LQKLWMIFRGL-----LEPIVTLEELQQQPQPVTLLFKLCQKNG 683 +E +++Y+FKNK LL EAL+H S Y D Y+RLEF+GDA L L ++ +F + + G L+ +R+ + E + V K ++ + E DN + + E++ AAIY+D + + ++KLW F + +P L+E Q +++L ++ G Sbjct: 7 LEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNFANYNEGNLAKIRSYLVCKETICMVGAKLTLKNYI---------IMTHGEEVAGGRDNL----------NNIENATEALIAAIYLDSNIETTHDIIEKLWAEFIKVQNLTDYDPKTALQEWAQASDHHLPIYRLIKREG 184
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_RICM5 (Ribonuclease 3 OS=Rickettsia massiliae (strain Mtu5) GN=rnc PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11 Identity = 51/197 (25.89%), Postives = 89/197 (45.18%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSS------YTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD-----LQKLWMIFRGL-----LEPIVTLEELQQQPQPVTLLFKLCQKNG 683 +E +++Y+FKNK LL EAL+H S Y D Y+RLEF+GDA L L ++ +F + + G L+ +R+ + E + V K ++ + E DN + + E++ AAIY+D + + ++KLW F + +P L+E Q +++L ++ G Sbjct: 7 LEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNFANYNEGHLAKIRSYLVCKETICMVGAKLTLKNYI---------IMTHGEEVAGGRDNL----------NNIENATEALIAAIYLDSNIETTYDIIEKLWAEFIKVQNLTDYDPKTALQEWAQASDHHLPIYRLIKREG 184
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_RICAE (Ribonuclease 3 OS=Rickettsia africae (strain ESF-5) GN=rnc PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11 Identity = 51/197 (25.89%), Postives = 89/197 (45.18%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSS------YTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD-----LQKLWMIFRGL-----LEPIVTLEELQQQPQPVTLLFKLCQKNG 683 +E +++Y+FKNK LL EAL+H S Y D Y+RLEF+GDA L L ++ +F + + G L+ +R+ + E + V K ++ + E DN + + E++ AAIY+D + + ++KLW F + +P L+E Q +++L ++ G Sbjct: 7 LEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNFANYNEGNLAKIRSYLVCKETICMVGAKLTLKNYI---------IMTHGEEVAGGRDNL----------NNIENATEALIAAIYLDSNIETTHDIIEKLWAEFIKVQNLTDYDPKTALQEWAQASDHHLPIYRLIKREG 184
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_NEIG1 (Ribonuclease 3 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=rnc PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11 Identity = 63/243 (25.93%), Postives = 108/243 (44.44%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQP-VTLLFKLCQ-------KNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMPV 845 ++ + Y F++ LL ALTH S+ + +R EF+GD+ L ++ +F A+P+L G+LS LRA+ ++ LA +A + + A L + P +LAD +E++ AA+ D DF+ + + R L V + Q Q + T L + Q K + I H + I+ + FV A ++ A+ AA+EAL L + +P+ Sbjct: 14 IQKKLGYAFRDMSLLRRALTHRSH-HAKHNERFEFVGDSILNYTVARMLFDAFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLGAGELK-------------------SSGFRRPSILADAMEAMFAAVSFDADFNTAE--KVVRHLFAERVRRADFQNQAKDGKTALQEALQARRFALPKYRIEEQIGHADDSMFVISCDLGELGFVCRAKGTSRKAAEQEAAKEALKWLEEKLPL 234 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |