DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCL1_ASPOR (Dicer-like protein 1 OS=Aspergillus oryzae GN=dcl1 PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 7.105e-17 Identity = 72/258 (27.91%), Postives = 118/258 (45.74%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTS----YQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSI-------KAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI---VTLEELQQQPQPVTLL----------FKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMP 842 VE + Y FK RLL A TH SY + + YQRLEF+GD+ L + + +F YP DP L+ + A +S + L +AVK G + +RH + L ++ +AE + +N + G++ PK L D+VE+ A +VD DF + + F+ ++ +T+ + P T L C K G+ + + +A+V V +A ++ AK+ A+ +AL L P Sbjct: 1244 VEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVPCYQRLEFLGDSLLDMVCVDDLFYRYPDKDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLRHFSNPLQSQITHYAEEIQAAENES--QGAVDYWLVTKDPPKCLPDMVEAYLGAAFVDSDFQFRVVEDFFQRHVKSYFHDMTIYDTFANKHPTTFLQNRLTNEYGCTNYCLKAGEIPVVDGGTVS--VLAAVIVHEVVIAEGTASSGRYAKVKASEKALSVLENMGP 1497
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_HELPG (Ribonuclease 3 OS=Helicobacter pylori (strain G27) GN=rnc PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 9.279e-17 Identity = 66/233 (28.33%), Postives = 118/233 (50.64%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKV-LADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQS 836 +E + Y+FK+KRLLE+ALTH S + + +RLEF+GDA LGL + ++ + Q D G+LS LRAA +S ++A ++R S++ K +E +S + G ++A + I++++ Y + DL+ L+M ++ L+EL Q V ++L Q+ G +++ ++Y+ A+A + K+ A+ A AL KL ++ Sbjct: 21 LEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGKLSKLRAAIVSAHGFTKLAKAIALQDYLRVSSSEEISKGREKPSILSSAFEALMAGVYLEAGLAKVRKIIQNLLNRAYKRL--DLEHLFMDYK------TALQELTQAQFCVIPTYQLLQEKGPD-------HHKEFEMALYIQDKMYATAKGKSKKEAEQQCAYYALQKLKEA 238
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_NITSB (Ribonuclease 3 OS=Nitratiruptor sp. (strain SB155-2) GN=rnc PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.212e-16 Identity = 71/239 (29.71%), Postives = 117/239 (48.95%), Query Frame = 3 Query: 144 ENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI--------------VTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREAL 818 E + Y+F++K+LL+EALTH SY + +RLEF+GDA L L + Y+F +P+ + G+LS LRA+ ++ E A++A K K++ S A +E+N G K P +L++ E++ AIY ++ L+K+ + LLE L+E Q +T +KL +G K +A V + +++A K+ A+ AA+EAL Sbjct: 8 EKKLGYSFEDKKLLKEALTHKSYKSPVNNERLEFLGDAVLDLVVGEYLFKKFPKANEGELSKLRASLVNEEGFAKLAQKLDIGKYIFISQA--------------EENNQ----GRTK-PSLLSNAFEAVMGAIY--LEKGLEKVRELSLKLLEEAYPKIDLDSLFKDFKTALQEFTQAHYGITPTYKLLGSSGPD------HKKEFEVA-VLLHEETISTAKGRSKKAAQQEAAKEAL 218
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_HELP2 (Ribonuclease 3 OS=Helicobacter pylori (strain P12) GN=rnc PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.212e-16 Identity = 70/250 (28.00%), Postives = 120/250 (48.00%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDID------------------FDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQS 836 +E + Y+FK+KRLLE+ALTH S + + +RLEF+GDA LGL + ++ + Q D G+LS LRA+ +S HGF K + A AL D ++ VS + + + P +L+ E++ A +Y++ DL+ L+M ++ L+EL Q V ++L Q+ G +++ ++Y+ A+A + K+ A+ A +AL KL ++ Sbjct: 21 LEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGKLSKLRASIVSA---------HGFTKLAK--AIALQDYLR-----VSSSEEIS---NGREKPSILSSAFEALMAGVYLEAGLAKVRKIIQNLLNRAYKRLDLEHLFMDYK------TALQELTQAQFCVIPTYQLLQEKGPD-------HHKEFEMALYIQDKMYATAKGKSKKEAEQQCAYQALQKLKEA 238
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCL1_MAGGR (Dicer-like protein 1 OS=Magnaporthe grisea GN=DCL1 PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 1.583e-16 Identity = 63/210 (30.00%), Postives = 102/210 (48.57%), Query Frame = 3 Query: 96 LTSLPSPEMEDAVFYVENIINYNFKNKRLLEEALTHSSYT----DSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQE----DNTAVYGGSIK-------------APKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI---VTLEELQQQPQPVT 653 L++ PS + ++N + Y FKN RLL A H SY + SYQRLEF+GD+ L + +Y+F +P DP L+ + A +S + VAV GF++ + H AL + E+AE V+++ AV G + PK L DI+E+ A++VD +D + F ++P +++ ++ PVT Sbjct: 1231 LSTPPSQTQLELCSQIKNKMGYRFKNPRLLRCAFMHPSYPRQYENIPSYQRLEFLGDSLLDMVCVDYLFKKHPDKDPQWLTEHKMAMVSNQFFGCVAVGLGFHRHLIHMQPALGGSITEWAELVTKKREEARQLAVRRGQREEDYARDFWIEVHHPPKCLPDILEAYVGALFVDTGYDYSAVVGFFDRHIKPYFADMSIYDMYSSKHPVT 1440
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_HELPY (Ribonuclease 3 OS=Helicobacter pylori GN=rnc PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 2.700e-16 Identity = 70/246 (28.46%), Postives = 119/246 (48.37%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI--------------VTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQS 836 +E + Y+FK+KRLLE+ALTH S + + +RLEF+GDA LGL + ++ + Q D G+LS LRA+ +S HGF K + A AL D ++ VS + + + P +L+ E++ A +Y ++ L K+ I + LL L+EL Q V ++L ++ G +++ ++Y+ A+A + K+ A+ A +AL KL ++ Sbjct: 21 LEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGKLSKLRASIVSA---------HGFTKLAK--AIALQDYLR-----VSSSEEIS---NGREKPSILSSAFEALMAGVY--LEAGLAKVQKIMQNLLNRAYKRLDLEHLFMDYKTALQELTQAQFCVIPTYQLLKEKGPD-------HHKEFEMALYIQDKMYATAKGKSKKEAEQQCAYQALQKLKEA 238
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BACHD (Ribonuclease 3 OS=Bacillus halodurans GN=rnc PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.526e-16 Identity = 69/244 (28.28%), Postives = 117/244 (47.95%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDSTSYQ------RLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWM-----------IFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 +N F NK+LL +A THSSY + Q RLEF+GDA L LA+S Y++ A+ Q+ G ++ LRA+ + LA++A + F + V L K +E G K P +LAD+ ES A+Y+D D L++ F +++ L+E Q+ + +++ Q+ G NR+ ++ V ++ + + K+ A+ +AA++AL L+Q Sbjct: 42 LNLTFANKKLLVQAFTHSSYVNEHRIQSCKDNERLEFLGDAVLELAVSQYLYKAFEQMSEGDMTKLRASIVCEPSLAQLAEELHFGELV------LLGKGEEMT-------------GGRKRPALLADVFESFVGALYLDQGMDAVYLFLERTIYPKISEGAFSHMMDFKSQLQEFIQRDNLGHIHYEIVQERGP-------AHNREFVSEVVLNNETLGVGTGRSKKEAEQHAAQQALITLSQ 259
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_ARCB4 (Ribonuclease 3 OS=Arcobacter butzleri (strain RM4018) GN=rnc PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 4.605e-16 Identity = 69/240 (28.75%), Postives = 121/240 (50.42%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVA--VKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI------VTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNI-ASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 +E ++Y FKNK L+ EALTH S+ + +RLEF+GDA L L + Y++L +P+ + G+LS +RA+ ++ R+A +K G Y F+ + ++E N G KA +L+D E+I AIY++ + K +I R L E V + + Q +T + +++ + ++K S+++DG AS + K++A+ AA+ A+ KL + Sbjct: 7 LEKCLDYQFKNKNLIIEALTHKSFKKPYNNERLEFLGDAVLNLIVGEYLYLKFPKSNEGELSKIRASLVNETGFTRLANEIKLGEYIFI----------------STAEERNK----GRTKA-SILSDAFEAIMGAIYLESGLNTLKP-IILRILEESYDKINLDVLFSDYKTALQEITQA-RFASIPEYKIEGSYGPDHKKEFEVSIWIDGKNYGKASGKSKKLAQQAAAKIAIDKLKE 223
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_LACAC (Ribonuclease 3 OS=Lactobacillus acidophilus GN=rnc PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.015e-16 Identity = 66/239 (27.62%), Postives = 113/239 (47.28%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYV-----DGSFVASASSEQKEIAKLNAAREALXK 824 ++N N F N++LLEEA THSSY++ Y++LEF+GDA L LA+SNY++ YP+L+ G+L+ LR+ + TE + A++ GF K + N G+ +L D+ E+ A+++D + ++ + P++ E T L +L Q+NG V+I++ + + S +V + K+ A+ AA+ AL K Sbjct: 10 LKNEYNIEFNNEKLLEEAFTHSSYSNEHPDDGIRDYEKLEFLGDAVLELAVSNYLYRHYPKLNEGELTRLRSNIVRTEGFSEFAIECGFQKEIHLG-------------------NGEEKAGARNRKTLLEDVFEAFNGALFLDQGMPAVERFLHL--TVYPLIAKGEFDDSRDYKTDLQELLQQNG-PVNIEYSVISESQLPSHFVVELKINDQVQTQGEGHNKKAAEQQAAKAALQK 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_HELPS (Ribonuclease 3 OS=Helicobacter pylori (strain Shi470) GN=rnc PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.026e-15 Identity = 69/245 (28.16%), Postives = 118/245 (48.16%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI--------------VTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 +E + Y+FK+KRLLE+ALTH S + + +RLEF+GDA LGL + ++ + Q D G+LS LRA+ +S HGF K + A ++++ S E+ + G K P +L+ E++ A +Y ++ L K+ I + LL L+EL Q V ++L ++ G +++ ++Y+ A+A + K+ A+ A +AL KL + Sbjct: 20 LEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGKLSKLRASIVSA---------HGFTKLAKVIA------LQDYLHISSSEE---ISNGREK-PSILSSAFEALMAGVY--LEAGLAKVQKIIQNLLNRAYKRLDLEHLFMDYKTALQELTQAQFCVIPTYQLLKEKGPD-------HHKEFEMALYIQDKIYATAKGKSKKEAEQQCAYQALQKLKE 236 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |