DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_HELAH (Ribonuclease 3 OS=Helicobacter acinonychis (strain Sheeba) GN=rnc PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.899e-15 Identity = 69/243 (28.40%), Postives = 116/243 (47.74%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI--------------VTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 +E + Y+FK+K LLE+ALTH S + + +RLEF+GDA LGL + ++ + Q D G+LS LRA+ +S + GF K R A +L D ++ VS + T+ + P +L+ E++ A +Y++ D K+ I + LL L+EL Q V ++L ++ G +++ +Y+ A+A + K+ A+ A +AL KL Sbjct: 16 LEKALGYSFKDKHLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGKLSKLRASIVSAQ---------GFTKLAR--AISLQDYLR-----VSSSEETS---KGREKPSILSSAFEALMAGVYLEAGLD--KVRKIMQNLLNRAYKRLDLEHLSVDYKTALQELTQAQFCVIPTYQLLKEKGP-------AHHKEFEMVLYIQNQMYATAKGKSKKEAEQQCAYQALQKL 230
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_LISMO (Ribonuclease 3 OS=Listeria monocytogenes GN=rnc PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.092e-15 Identity = 69/248 (27.82%), Postives = 113/248 (45.56%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIV-------------TLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 ++ + ++FKN LL++A THSSY + +RLEF+GDA L L +S+Y+F YP + G ++ +RAA + L A F K+VR K +E A G P +LAD+ ES A+Y+D D K+ ++ P + L+E+ Q+ + V + + + + G N+ A V V+G + S K+ A+ +AA+ A+ KL Sbjct: 7 LQESVGFDFKNVELLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSDYLFNKYPDMAEGHMTKMRAAIVCEPSLVEFAEAVHFSKYVRLG------KGEEKA-------------GGRTRPALLADVFESFIGALYLDNGID--KVVTFLERVIFPKIDAGAYLQTVDYKTQLQEIVQRDRDVLIEYDILGETGP-------AHNKAFDAQVIVNGQVLGKGSGRTKKQAEQSAAQFAINKL 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BACWK (Ribonuclease 3 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rnc PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.092e-15 Identity = 69/246 (28.05%), Postives = 113/246 (45.93%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVT-------------LEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 I F +++LL +A THSSY + +RLEF+GDA L L +S Y+F YP + G+L+ LRAA + L R A + F V L K +E G + P +LAD+ E+ A+Y +D L+ +W + ++ P + L+EL Q+ + +++ Q+ G NR+ ++ V ++ + S + K+ A+ AA EAL KL + Sbjct: 26 IGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSEGELTKLRAAIVCEPSLVRFANEMSFGSLV------LLGKGEEMT-------------GGRERPALLADVFEAFIGALY--LDQGLETVWGYLKEVVYPKINEGAFSHVMDYKSQLQELIQRDGSGNVEYQILQEKGP-------AHNREFVSRVTLNNEALGLGSGKSKKEAEQQAAAEALKKLKE 243
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BACCZ (Ribonuclease 3 OS=Bacillus cereus (strain ZK / E33L) GN=rnc PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.092e-15 Identity = 68/248 (27.42%), Postives = 113/248 (45.56%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVT-------------LEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSM 839 I F +++LL +A THSSY + +RLEF+GDA L L +S Y+F YP + G+L+ LRAA + L R A + F L K +E G + P +LAD+ E+ A+Y +D L+ +W + ++ P + L+EL Q+ + +++ Q+ G NR+ ++ V ++ + S + K+ A+ AA EAL KL + + Sbjct: 26 IGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSEGELTKLRAAIVCEPSLVRFANELSF------GGLVLLGKGEEMT-------------GGRERPALLADVFEAFIGALY--LDQGLETVWGFLKEIVYPKINEGAFSHVMDYKSQLQELIQRDGSGNIEYQILQEKGP-------AHNREFVSRVTLNNVALGLGSGKSKKEAEQQAAAEALKKLKEQL 245
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BACLD (Ribonuclease 3 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rnc PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 6.650e-15 Identity = 69/242 (28.51%), Postives = 112/242 (46.28%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWM-----------IFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 I+ F+N++LL +A THSSY + +RLEF+GDA L L +S +++ YP + G L+ LRAA + L +A + F + V L K +E G K P +LAD+ E+ A+Y+D + ++ F +++ L+E Q+ L +K+ Q+ G NR+ A+V + G + S K+ A+ +AA+EAL KL Sbjct: 27 ISVQFQNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGDAVLELTISQFLYAKYPAMSEGDLTKLRAAIVCEPSLVSLAHELSFGELV------LLGKGEEMT-------------GGRKRPALLADVFEAFIGALYLDQGLEAVVTFLKAYVFPKIDDGAFSHVMDFKSQLQEFVQRDGRGILEYKILQEKGP-------AHNREFEANVSLKGEVLGVGSGRSKKEAEQHAAQEALAKL 242
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_PELTS (Ribonuclease 3 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=rnc PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 8.685e-15 Identity = 70/250 (28.00%), Postives = 119/250 (47.60%), Query Frame = 3 Query: 114 PEMEDAVFYVENIINYNFKNKRLLEEALTHSSYTDST------SYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIV--TLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRK-----NRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXK 824 P+ +D + ++N + ++++ LL ALTHSS+T + QRLEF+GDA L LA+S+Y++ + P++D G L+ LRA+ + LARVA + E + GG + P +LAD E++ A+Y +D L+K + L P++ LE ++ L + Q+ G+QV ++ ++ A V G V + K+ A+ AA++AL K Sbjct: 2 PDAQDKLTLLKNRLGIAWRDEGLLTRALTHSSFTYENRQNGLENNQRLEFLGDAVLELAVSDYLYRSKPEMDEGDLTKLRASVVCEPSLARVA------------------RELELGTCLYMGKGEERSGGRDR-PSILADAFEALLGAVY--LDQGLEKAAGLAIKYLAPLIGDVLEGRLERDYKTELQELVQQRGGEQVQYVILKEEGPDHHKSFTAGVLYRGVLVGQGTGRSKKEAEQQAAKKALMK 230
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_GEOKA (Ribonuclease 3 OS=Geobacillus kaustophilus GN=rnc PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 8.685e-15 Identity = 69/246 (28.05%), Postives = 112/246 (45.53%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD-----LQKLWM------IFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 ++N I F+N++LL +A THSSY + +RLEF+GDA L L +S Y+F +P + GQL+ LRAA + L + A F E V + GG + P +LAD+ E+ A+Y+D D L+K F +++ L+EL Q+ TL + + ++ G N++ +A V ++G + K+ A+ +AA+ AL L Sbjct: 21 LQNKIGITFRNEKLLIQAFTHSSYVNEHRRRLHEDNERLEFLGDAVLELTVSQYLFQKFPHMSEGQLTKLRAAIVCEPSLVKFA------------------NALSFGELVLLGKGEELTGGRTR-PALLADVFEAFIGALYLDQGMDAVIRFLEKTMFPKIDEGAFSHVMDFKSQLQELVQRDGSGTLEYAILEEKGP-------AHNKEFVARVALNGQELGIGVGRSKKEAEQHAAQMALETL 240
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_WOLSU (Ribonuclease 3 OS=Wolinella succinogenes GN=rnc PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.134e-14 Identity = 70/228 (30.70%), Postives = 111/228 (48.68%), Query Frame = 3 Query: 144 ENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSI---KAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREAL 818 E + Y F+NK LL EALTH SY + +RLEF+GDA L L + ++FL +P+ D G+LS +RA+ ++ + A++A + + + S A ++K +E +S + G+I V+ ++V + +Y ID L +FR + L+EL Q T + + +G K +A V V GS A A K+ A+ AAR AL Sbjct: 8 EKRLGYRFQNKNLLIEALTHKSYKKPYNNERLEFLGDAVLDLVIGEFLFLKFPKADEGELSKMRASLVNEKGFAKLAERVSLGRHIFISNAEENNKGREKPSLLSNAFEATM--GAIYLETGLSVVREVVHRLLDEVYPKID-----LGSLFR---DYKTALQELTQAKFGETPEYVILGSSGPD------HKKEFEVA-VCVLGSEYARACGSSKKEAQQEAARIAL 218
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_THETN (Ribonuclease 3 OS=Thermoanaerobacter tengcongensis GN=rnc PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.134e-14 Identity = 68/247 (27.53%), Postives = 115/247 (46.56%), Query Frame = 3 Query: 138 YVENIINYNFKNKRLLEEALTHSSYT-----DSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD--IDFDLQKLWMIFRGLLEPIV----------TLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 Y+E INY FK+K LL EALTHSS+ + S +RLEF+GD+ L L +S Y++ L+ G LS RA + LAR A K F+R E +S G +LAD +E++ AA+Y+D ++ + + +F+ +++ ++ L+E+ Q + + ++L ++ G N+ + V + + + K+ ++ AA EAL KL Sbjct: 4 YLEQKINYEFKDKTLLLEALTHSSWAHEGKNEKVSNERLEFLGDSVLSLVISEYLYKNRKDLEEGSLSKYRAEIVCEPSLARCARKIELGSFLRMGK----------GEEIS---------GGRDRDSILADAMEALLAAVYLDGGLEAVRRVILDLFKEIIDEVLKGIIYRDYKTRLQEVVQSMEVGKITYELVEEIGPD-------HNKTFVTQVKIGDVVLGIGQGKSKKESEQAAAMEALSKL 224
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_SULNB (Ribonuclease 3 OS=Sulfurovum sp. (strain NBC37-1) GN=rnc PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.134e-14 Identity = 73/243 (30.04%), Postives = 113/243 (46.50%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI--------------VTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 +E +NY FK+K+L+ EALTH SY + +RLEF+GDA L L + Y+F +P+ D G LS +RA+ ++ +A K ++ S A +E+N G K P +L++ E+I A+Y++ D K I LLE L+EL Q VT +++ +G K IA V +D +A+A + K+ A+ AA+ AL L Sbjct: 7 LEKRLNYTFKDKQLIIEALTHKSYKKPYNNERLEFLGDAVLDLIVGEYLFKKFPKSDEGILSKIRASLVNESGFTLLARKIDLGSYIYLSLA--------------EENN----NGRDK-PSLLSNAFEAIIGAVYLEAGLDTAK--EISIKLLEECHPKIDLQSLSKDYKTALQELTQATHAVTPGYEMLGSSGPD------HKKEFEIA-VTLDNKTIATAKGKSKKDAQQKAAKIALEAL 221 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |