DY262450
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H30_ARATH (Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana GN=At2g41900 PE=1 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 2.598e-40 Identity = 68/105 (64.76%), Postives = 83/105 (79.05%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRIL 733 FRMY FK+R C+R+ SHDWT+CPF HP E ARRRDPR++HYS C ++R+G C GD CE+AHGVFECWLHP++YRT CKDG C R+VCFFAH+P +LR L Sbjct: 262 FRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGA-CRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAHTPEELRPL 365
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H24_ORYSJ (Zinc finger CCCH domain-containing protein 24 OS=Oryza sativa subsp. japonica GN=Os03g0698800 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.290e-39 Identity = 69/105 (65.71%), Postives = 83/105 (79.05%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRIL 733 FRMY FKIR C+R+ SHDWT+CPF HP E ARRRDPR+YHYS C ++R+G C GD CE+AHGVFECWLHP++YRT CKDG +C R+VCFFAH+ +LR L Sbjct: 282 FRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGV-CRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPL 385
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H56_ARATH (Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis thaliana GN=At5g12850 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 6.400e-39 Identity = 66/105 (62.86%), Postives = 83/105 (79.05%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRIL 733 FRM+ FKIR C+R+ SHDWT+CPFAHP E ARRRDPR++HY+ C ++++G C GD CE+AHGVFECWLHP++YRT CKDG C R+VCFFAH+ +LR L Sbjct: 258 FRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDPRKFHYTCVPCPDFKKGS-CKQGDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAHANEELRPL 361
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H54_ARATH (Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana GN=PEI1 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.426e-38 Identity = 69/103 (66.99%), Postives = 78/103 (75.73%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLR 727 FRMY +KI+RC R+RSHDWT+CP+AH EKA RRDPRRY Y C +R G C GD CEFAHGVFE WLHP+RYRT AC G C+RKVCFFAH+P QLR Sbjct: 53 FRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFRNGA-CHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLR 154
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H50_ORYSJ (Zinc finger CCCH domain-containing protein 50 OS=Oryza sativa subsp. japonica GN=Os07g0568300 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.432e-38 Identity = 64/106 (60.38%), Postives = 80/106 (75.47%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILP 736 FRM+ FK+R C+R+ SHDWT+CPF HP E ARRRDPR++ Y+ C +RR GGC GD CEF+HGVFE WLHPS+YRT CK+G C R++CFFAH +LR +P Sbjct: 235 FRMFAFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKHPYTAVPCPNFRRPGGCPSGDSCEFSHGVFESWLHPSQYRTRLCKEGAACARRICFFAHDEDELRHVP 340
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H37_ORYSJ (Zinc finger CCCH domain-containing protein 37 OS=Oryza sativa subsp. japonica GN=Os05g0525900 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.334e-36 Identity = 66/105 (62.86%), Postives = 77/105 (73.33%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRR--GGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLR 727 F MYEFK+RRC R+RSHDWT CP+AHP E ARRRDPRR Y+G C ++RR G C G C FAHG FE WLHPSRYRT C+ G C+R+VCFFAH+ +LR Sbjct: 59 FMMYEFKVRRCARARSHDWTACPYAHPGEAARRRDPRRVAYTGEPCPDFRRRPGAACPRGSTCPFAHGTFELWLHPSRYRTRPCRAGVACRRRVCFFAHTAGELR 163
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H29_ARATH (Zinc finger CCCH domain-containing protein 29 OS=Arabidopsis thaliana GN=At2g40140 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.927e-35 Identity = 62/103 (60.19%), Postives = 77/103 (74.76%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLR 727 FRM+ FK++ C+R+ SHDWT+CPF HP E ARRRDPR+Y Y+ C E+R+ G C GD CE+AHGVFE WLHP++YRT CKD C R+VCFFAH +LR Sbjct: 215 FRMFSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYTCVPCPEFRK-GSCPKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCARRVCFFAHRRDELR 316
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H47_ARATH (Zinc finger CCCH domain-containing protein 47 OS=Arabidopsis thaliana GN=At3g55980 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 4.293e-35 Identity = 61/103 (59.22%), Postives = 76/103 (73.79%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLR 727 FRMY FK++ C+R+ SHDWT+C F HP E ARRRDPR+Y Y+ C E+R+G C GD CE+AHGVFE WLHP++Y+T CKD C RKVCFFAH ++R Sbjct: 212 FRMYSFKVKPCSRAYSHDWTECAFVHPGENARRRDPRKYPYTCVPCPEFRKGS-CPKGDSCEYAHGVFESWLHPAQYKTRLCKDETGCARKVCFFAHKREEMR 313
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H10_ORYSJ (Zinc finger CCCH domain-containing protein 10 OS=Oryza sativa subsp. japonica GN=Os01g0738400 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 6.199e-34 Identity = 62/107 (57.94%), Postives = 74/107 (69.16%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYR--RGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRIL 733 F MYEFK+RRC RSR+H+WT CP+AHP E ARRRDP Y+G C ++R C G C FAHG FE WLHPSRYRT C+ G C R VCFFAH+ ++LRI+ Sbjct: 45 FMMYEFKVRRCPRSRAHEWTSCPYAHPGEAARRRDPSHVTYTGEPCPDFRVAARAACPRGSGCPFAHGTFETWLHPSRYRTRPCRSGMLCARPVCFFAHNDKELRIV 151 The following BLAST results are available for this feature:
BLAST of DY262450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262450 ID=DY262450; Name=DY262450; organism=Citrus clementina; type=EST; length=1305bpback to top |