DY262521

Overview
NameDY262521
Unique NameDY262521
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1243
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRKY2_ARATH (Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.203e-25
Identity = 58/117 (49.57%), Postives = 72/117 (61.54%), Query Frame = 3
Query:  630 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGSIGIMANDHNSTATFGASSSFVIRQPSYPSLHHQQP 980
            REPR    T SD+D LDDGYRWRKYGQK VK +P+PRSYY+CT+ GC V+K VER+S D   V+TTYEG+H H  P     S G   +  N  +   A+ S       Y + HH +P
Sbjct:  471 REPRVVVQTTSDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTAPGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSSHGGGGDSGNGNSGGSAAVSH-----HYHNGHHSEP 582          

HSP 2 Score: 75.8702 bits (185), Expect = 5.629e-13
Identity = 37/66 (56.06%), Postives = 43/66 (65.15%), Query Frame = 3
Query:  678 DDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGS 875
            +DGY WRKYGQK VK S +PRSYY+CT+  C VKK+VERS E   I    Y+G H H  P   R S
Sbjct:  273 EDGYNWRKYGQKLVKGSEYPRSYYKCTNPNCQVKKKVERSREG-HITEIIYKGAHNHLKPPPNRRS 337          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 6.410e-25
Identity = 51/83 (61.45%), Postives = 61/83 (73.49%), Query Frame = 3
Query:  630 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGSI 878
            +EPR    T SDID LDDGYRWRKYGQK VK +P+PRSYY+CT  GC V+K VER+ +DP  V+TTYEG+H H  P   RG +
Sbjct:  218 KEPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTFTGCFVRKHVERAFQDPKSVITTYEGKHKHQIPTPRRGPV 300          

HSP 2 Score: 77.7962 bits (190), Expect = 1.481e-13
Identity = 38/78 (48.72%), Postives = 47/78 (60.26%), Query Frame = 3
Query:  678 DDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHPSP-ITPRGSIGIMANDHNST 908
            DDGY WRKYGQK VK S +PRSY++CT   C  KK+VE S     ++   Y+G H HP P  T R S   +A   NS+
Sbjct:  117 DDGYNWRKYGQKQVKGSENPRSYFKCTYPNCLTKKKVETSLVKGQMIEIVYKGSHNHPKPQSTKRSSSTAIAAHQNSS 194          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRKY4_ARATH (Probable WRKY transcription factor 4 OS=Arabidopsis thaliana GN=WRKY4 PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 8.372e-25
Identity = 50/81 (61.73%), Postives = 60/81 (74.07%), Query Frame = 3
Query:  633 EPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGS 875
            EPR    T S++D LDDGYRWRKYGQK VK +P+PRSYY+CT+ GCGV+K VER++ DP  VVTTYEG+H H  P     S
Sbjct:  394 EPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPAAKSSS 474          

HSP 2 Score: 83.9593 bits (206), Expect = 2.067e-15
Identity = 45/86 (52.33%), Postives = 53/86 (61.63%), Query Frame = 3
Query:  678 DDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIH-PSPITPRGSIGIMANDHNSTATFGASSS 932
            DDGY WRKYGQK VK S  PRSYY+CT+ GC VKK+VERS  D  +    Y+GQH H P   T RG+    AN + S+      SS
Sbjct:  229 DDGYNWRKYGQKQVKGSEFPRSYYKCTNPGCPVKKKVERSL-DGQVTEIIYKGQHNHEPPQNTKRGNKDNTANINGSSINNNRGSS 313          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK33_ARATH (Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.865e-24
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 3
Query:  630 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGS 875
            REPR    T SDID LDDGYRWRKYGQK VK +P+PRSYY+CT+ GC V+K VER+S D   V+TTYEG+H H  P   RGS
Sbjct:  346 REPRIVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTIGCPVRKHVERASHDMRAVITTYEGKHNHDVP-AARGS 426          

HSP 2 Score: 80.1073 bits (196), Expect = 2.985e-14
Identity = 41/83 (49.40%), Postives = 50/83 (60.24%), Query Frame = 3
Query:  678 DDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGSIGIMANDHNSTATFGAS 926
            +DGY WRKYGQK VK S +PRSYY+CT   C  KK+VERS E   I    Y+G H HP P + R S    +  H  +A + AS
Sbjct:  184 EDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLEG-QITEIVYKGSHNHPKPQSTRRSSSSSSTFH--SAVYNAS 263          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK24_ARATH (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.181e-24
Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 3
Query:  636 PRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHP 851
            PR AF T+SD D LDDGYRWRKYGQK+VK++ HPRSYYRCT   C VKK+V+R ++DP +VVTTYEG H HP
Sbjct:   84 PRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHP 155          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK20_ARATH (Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.181e-24
Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 3
Query:  630 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGS 875
            REPR    T S++D LDDGYRWRKYGQK V+ +P+PRSYY+CT+ GC V+K VER+S DP  V+TTYEG+H H  P +   S
Sbjct:  365 REPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTAHGCPVRKHVERASHDPKAVITTYEGKHDHDVPTSKSSS 446          

HSP 2 Score: 78.1814 bits (191), Expect = 1.134e-13
Identity = 40/71 (56.34%), Postives = 43/71 (60.56%), Query Frame = 3
Query:  678 DDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGSIGIMA 890
            DDGY WRKYGQK VK S  PRSYY+CT   C VKK  ER S D  I    Y+G H HP P   R + G MA
Sbjct:  211 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFER-SHDGQITDIIYKGTHDHPKPQPGRRNSGGMA 280          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.426e-24
Identity = 49/74 (66.22%), Postives = 59/74 (79.73%), Query Frame = 3
Query:  630 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHP 851
            ++ R+AF T+S +D LDDGYRWRKYGQKAVKN+  PRSYYRCT  GC VKK+V+R + D  +VVTTYEG H HP
Sbjct:   51 KKQRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHP 124          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK58_ARATH (Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.426e-24
Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = 3
Query:  633 EPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGSIGIMA 890
            EP+    TKS++D LDDGYRWRKYGQK VK +PHPRSYY+CT+  C V+K VER+S D   V+TTYEG+H H  P    G+    A
Sbjct:  291 EPKIIVQTKSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTTPNCTVRKHVERASTDAKAVITTYEGKHNHDVPAARNGTAAATA 376          

HSP 2 Score: 82.4185 bits (202), Expect = 6.014e-15
Identity = 39/68 (57.35%), Postives = 44/68 (64.71%), Query Frame = 3
Query:  678 DDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGSIG 881
            DDGY WRKYGQK +K   +PRSYY+CT   C VKK+VERSS D  I    Y+GQH H  P   RG  G
Sbjct:  167 DDGYNWRKYGQKPIKGCEYPRSYYKCTHVNCPVKKKVERSS-DGQITQIIYKGQHDHERPQNRRGGGG 233          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.426e-24
Identity = 50/71 (70.42%), Postives = 58/71 (81.69%), Query Frame = 3
Query:  639 RFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHP 851
            R AF T+SD D LDDGYRWRKYGQK+VKN+ HPRSYYRCT   C VKK+V+R ++DP +VVTTYEG H HP
Sbjct:  101 RIAFHTRSDDDVLDDGYRWRKYGQKSVKNNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHP 171          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK43_ARATH (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.426e-24
Identity = 51/74 (68.92%), Postives = 60/74 (81.08%), Query Frame = 3
Query:  630 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTSAGCGVKKRVERSSEDPTIVVTTYEGQHIHP 851
            + PRF+F TKSD D LDDGYRWRKYGQK+VKNS +PRSYYRCT   C VKK+V+R S++ +IV TTYEG H HP
Sbjct:   14 KNPRFSFRTKSDADILDDGYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLSKETSIVETTYEGIHNHP 87          
The following BLAST results are available for this feature:
BLAST of DY262521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
WRKY2_ARATH2.203e-2549.57Probable WRKY transcription factor 2 OS=Arabidopsi... [more]
WRK26_ARATH6.410e-2561.45Probable WRKY transcription factor 26 OS=Arabidops... [more]
WRKY4_ARATH8.372e-2561.73Probable WRKY transcription factor 4 OS=Arabidopsi... [more]
WRK33_ARATH1.865e-2464.63Probable WRKY transcription factor 33 OS=Arabidops... [more]
WRK24_ARATH3.181e-2469.44Probable WRKY transcription factor 24 OS=Arabidops... [more]
WRK20_ARATH3.181e-2459.76Probable WRKY transcription factor 20 OS=Arabidops... [more]
WRK75_ARATH5.426e-2466.22Probable WRKY transcription factor 75 OS=Arabidops... [more]
WRK58_ARATH5.426e-2456.98Probable WRKY transcription factor 58 OS=Arabidops... [more]
WRK56_ARATH5.426e-2470.42Probable WRKY transcription factor 56 OS=Arabidops... [more]
WRK43_ARATH5.426e-2468.92Probable WRKY transcription factor 43 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AH01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262521 ID=DY262521; Name=DY262521; organism=Citrus clementina; type=EST; length=1243bp
CTAAAGCAAGAAGACTGCAAGAGCGAAGCAAAGTAGGCCTCTTTTTACAT
AGAATTTGTTGTATTTTGATTTTACTATGTGGGTGTGATTGATTTTTAAT
GGAGAAACGAGAAGCTGAAACTTCAATCTCGATGGCGAATTCGACGCTAC
TTTCCGATGAGAATCCGGCGGGTGGGTATGGATTAGGAGGCATATTTGAC
ATGTCATGTGAGGGTGATAAGTGGGATGCAGCTTCTTTTGGTTTCATGGA
CTTGCTCAATGTCCAGAACCATAATACTAATTATAACAATCAAGATTTTG
GTGGTGATTCTTTTTTATTCAGTAATACTTTACATCCACCACCACCGGCG
GCAGCACCGATTCTCCCACCACCACCACCACAGCCGTCGCCGGCACCGGA
ATCCTCAGAGGTGTTGAACAACCCAGCTACTCCCAACTCATCCTCAATCT
CTTCATCATCAAACGAAGCAGCAGCTAATAATACCAATAATGAAGAGCAA
ACTGACACGAACAACAACAACAACAACAACAACAAAAACAGCAGCAGCAA
AGCTGGTGATGACGATGAACAAGAACAAGATAAGACTAAGAAACAGTTGA
AACCCAAAAAGAAGAATCAAAAGAAACAGAGAGAGCCAAGATTCGCGTTC
ATGACAAAGAGTGATATTGATCACTTAGATGATGGATACAGATGGCGAAA
GTACGGCCAAAAAGCTGTCAAAAATAGCCCCCATCCGAGAAGCTACTATC
GTTGCACTAGTGCCGGCTGCGGAGTGAAGAAGCGAGTGGAGAGATCATCT
GAAGACCCAACGATTGTTGTAACAACGTATGAAGGACAACACATACATCC
AAGCCCGATAACGCCTCGAGGGAGTATTGGAATCATGGCCAATGATCATA
ATTCGACTGCTACTTTTGGTGCTTCATCATCCTTTGTGATTCGGCAGCCC
TCATATCCTTCACTACATCACCAACAGCCAACCCTACATATATAGTTCAT
CGCCTCCGGTTGAATCAATTACCTTCTAATGGTACCAATAACTACCGCTA
ATTCTAAGTTTCAATAATCCCTACCTTTTCCCAGTTTTGGTTCCTCCATC
AACAAGCCAAAAAAGACGTTAAAAAGAATGAAAAAGTTCCCTTTCAGAGG
GCTTCCTTTTGTTTCTAAGAACCCCGCGCCCTGGGTTTCCGGGAGACATC
CGGGGCCCCTTCAACCAATTTGGCCAAAAAGGAAACCCCACAA
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