DY262521

Overview
NameDY262521
Unique NameDY262521
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1243
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK27_ARATH (Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.699e-15
Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 3
Query:  681 DGYRWRKYGQKAVKNSPHPRSYYRCTSA-GCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGSI 878
            D + WRKYGQK +K SP+PR+YYRC+S+ GC  +K+VERS+ DP I + TY G+H HP P T R S+
Sbjct:  166 DLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCLARKQVERSNLDPNIFIVTYTGEHTHPRP-THRNSL 231          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK60_ARATH (Probable WRKY transcription factor 60 OS=Arabidopsis thaliana GN=WRKY60 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.526e-15
Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 3
Query:  681 DGYRWRKYGQKAVKNSPHPRSYYRCT-SAGCGVKKRVERSSEDPTIVVTTYEGQHIHPSP 857
            DGY+WRKYGQK  +++P PR+Y+RC+ S  C VKK+V+RS+EDP+ +V TYEG H H  P
Sbjct:  147 DGYQWRKYGQKITRDNPSPRAYFRCSFSPSCLVKKKVQRSAEDPSFLVATYEGTHNHTGP 206          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK18_ARATH (WRKY transcription factor 18 OS=Arabidopsis thaliana GN=WRKY18 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 3.526e-15
Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 3
Query:  681 DGYRWRKYGQKAVKNSPHPRSYYRCTSA-GCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRG 872
            DG++WRKYGQK  +++P PR+Y+RC+ A  C VKK+V+RS+EDP+++V TYEG H H  P    G
Sbjct:  177 DGFQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPSLLVATYEGTHNHLGPNASEG 241          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.604e-15
Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 3
Query:  681 DGYRWRKYGQKAVKNSPHPRSYYRCTSA-GCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGSIGIMANDHNSTATFGASSSFVIRQPSYPS 962
            D + WRKYGQK +K SP+PR YYRC+S+ GC  +K+VERS  DP ++V TY  +H HP P T R ++       +S++   +S S      + PS
Sbjct:  216 DLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWP-TQRNALAGSTRSSSSSSLNPSSKSSTAAATTSPS 309          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK14_ARATH (Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.026e-14
Identity = 43/95 (45.26%), Postives = 55/95 (57.89%), Query Frame = 3
Query:  681 DGYRWRKYGQKAVKNSPHPRSYYRCTSA-GCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGSIGIMANDHNSTATFGASSSFVIRQPSYPS 962
            D + WRKYGQK +K SP PR YYRC+S+ GC  +K+VERS  DP ++V TY  +H HP PI      G         +T  ++SS     PS PS
Sbjct:  218 DLWAWRKYGQKPIKGSPFPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPIQRNALAG---------STRSSTSSSSNPNPSKPS 303          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK11_ARATH (Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.750e-14
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 3
Query:  681 DGYRWRKYGQKAVKNSPHPRSYYRC-TSAGCGVKKRVERSSEDPTIVVTTYEGQHIH 848
            D Y WRKYGQK +K SPHPR YY+C T  GC  +K VER+ +DP +++ TYEG+H H
Sbjct:  247 DEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDPAMLIVTYEGEHRH 303          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK21_ARATH (Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.285e-14
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 3
Query:  681 DGYRWRKYGQKAVKNSPHPRSYYRCTS-AGCGVKKRVERSSEDPTIVVTTYEGQHIHP 851
            D Y WRKYGQK +K SP+PR YY+C+S  GC  +K VER  EDP +++ TYE +H HP
Sbjct:  314 DDYSWRKYGQKPIKGSPYPRGYYKCSSMRGCPARKHVERCLEDPAMLIVTYEAEHNHP 371          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.985e-14
Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 3
Query:  681 DGYRWRKYGQKAVKNSPHPRSYYRCTSA-GCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGSIGIMANDHNSTATFGASSSFVIRQ 947
            D + WRKYGQK +K+SP+PRSYYRC S+ GC  +K+VERS  DP + V TY  +H HP P       G   +  +  +    S+S  + Q
Sbjct: 1181 DLWVWRKYGQKPIKSSPYPRSYYRCASSKGCFARKQVERSRTDPNVSVITYISEHNHPFPTLRNTLAGSTRSSSSKCSDVTTSASSTVSQ 1270          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK15_ARATH (Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.985e-14
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 3
Query:  681 DGYRWRKYGQKAVKNSPHPRSYYRCTSA-GCGVKKRVERSSEDPTIVVTTYEGQHIH 848
            D Y WRKYGQK +K SPHPR YY+C+S  GC  +K VER+++D ++++ TYEG H H
Sbjct:  241 DDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAADDSSMLIVTYEGDHNH 297          
BLAST of DY262521 vs. ExPASy Swiss-Prot
Match: WRK22_ARATH (WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.898e-14
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  681 DGYRWRKYGQKAVKNSPHPRSYYRC-TSAGCGVKKRVERSSEDPTIVVTTYEGQHIHPSPITPRGSI 878
            D + WRKYGQK +K SP+PR YYRC TS GC  +K+VER+  DP + + TY  +H HP+P T R S+
Sbjct:  129 DVWAWRKYGQKPIKGSPYPRGYYRCSTSKGCLARKQVERNRSDPKMFIVTYTAEHNHPAP-THRNSL 194          
The following BLAST results are available for this feature:
BLAST of DY262521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
WRK27_ARATH2.699e-1556.72Probable WRKY transcription factor 27 OS=Arabidops... [more]
WRK60_ARATH3.526e-1558.33Probable WRKY transcription factor 60 OS=Arabidops... [more]
WRK18_ARATH3.526e-1553.85WRKY transcription factor 18 OS=Arabidopsis thalia... [more]
WRK35_ARATH4.604e-1543.16Probable WRKY transcription factor 35 OS=Arabidops... [more]
WRK14_ARATH1.026e-1445.26Probable WRKY transcription factor 14 OS=Arabidops... [more]
WRK11_ARATH1.750e-1457.89Probable WRKY transcription factor 11 OS=Arabidops... [more]
WRK21_ARATH2.285e-1456.90Probable WRKY transcription factor 21 OS=Arabidops... [more]
WRK16_ARATH2.985e-1443.33Probable WRKY transcription factor 16 OS=Arabidops... [more]
WRK15_ARATH2.985e-1456.14Probable WRKY transcription factor 15 OS=Arabidops... [more]
WRK22_ARATH3.898e-1453.73WRKY transcription factor 22 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AH01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262521 ID=DY262521; Name=DY262521; organism=Citrus clementina; type=EST; length=1243bp
CTAAAGCAAGAAGACTGCAAGAGCGAAGCAAAGTAGGCCTCTTTTTACAT
AGAATTTGTTGTATTTTGATTTTACTATGTGGGTGTGATTGATTTTTAAT
GGAGAAACGAGAAGCTGAAACTTCAATCTCGATGGCGAATTCGACGCTAC
TTTCCGATGAGAATCCGGCGGGTGGGTATGGATTAGGAGGCATATTTGAC
ATGTCATGTGAGGGTGATAAGTGGGATGCAGCTTCTTTTGGTTTCATGGA
CTTGCTCAATGTCCAGAACCATAATACTAATTATAACAATCAAGATTTTG
GTGGTGATTCTTTTTTATTCAGTAATACTTTACATCCACCACCACCGGCG
GCAGCACCGATTCTCCCACCACCACCACCACAGCCGTCGCCGGCACCGGA
ATCCTCAGAGGTGTTGAACAACCCAGCTACTCCCAACTCATCCTCAATCT
CTTCATCATCAAACGAAGCAGCAGCTAATAATACCAATAATGAAGAGCAA
ACTGACACGAACAACAACAACAACAACAACAACAAAAACAGCAGCAGCAA
AGCTGGTGATGACGATGAACAAGAACAAGATAAGACTAAGAAACAGTTGA
AACCCAAAAAGAAGAATCAAAAGAAACAGAGAGAGCCAAGATTCGCGTTC
ATGACAAAGAGTGATATTGATCACTTAGATGATGGATACAGATGGCGAAA
GTACGGCCAAAAAGCTGTCAAAAATAGCCCCCATCCGAGAAGCTACTATC
GTTGCACTAGTGCCGGCTGCGGAGTGAAGAAGCGAGTGGAGAGATCATCT
GAAGACCCAACGATTGTTGTAACAACGTATGAAGGACAACACATACATCC
AAGCCCGATAACGCCTCGAGGGAGTATTGGAATCATGGCCAATGATCATA
ATTCGACTGCTACTTTTGGTGCTTCATCATCCTTTGTGATTCGGCAGCCC
TCATATCCTTCACTACATCACCAACAGCCAACCCTACATATATAGTTCAT
CGCCTCCGGTTGAATCAATTACCTTCTAATGGTACCAATAACTACCGCTA
ATTCTAAGTTTCAATAATCCCTACCTTTTCCCAGTTTTGGTTCCTCCATC
AACAAGCCAAAAAAGACGTTAAAAAGAATGAAAAAGTTCCCTTTCAGAGG
GCTTCCTTTTGTTTCTAAGAACCCCGCGCCCTGGGTTTCCGGGAGACATC
CGGGGCCCCTTCAACCAATTTGGCCAAAAAGGAAACCCCACAA
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