DY262523

Overview
NameDY262523
Unique NameDY262523
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1243
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262523 vs. ExPASy Swiss-Prot
Match: XYL1_TRIRE (NAD(P)H-dependent D-xylose reductase OS=Trichoderma reesei GN=xyl1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.208e-17
Identity = 53/160 (33.12%), Postives = 85/160 (53.12%), Query Frame = 3
Query:  198 ILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWP---------VSSKPG-SYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQV 647
            +  A+K GYR FD A  Y  E+  G+ +A A+  G++K R++LFI SKLW +    + V P  ++ L + Q++Y DL+++H+P         V   PG  Y+   +         +  W AME   + G  ++IGVSN+  + + D L  A+I PA  Q+
Sbjct:   33 VYNAIKAGYRLFDGACDYGNEKECGEGVARAIKDGLVK-REDLFIVSKLWQTFHDEDKVEPITRRQLADWQIDYFDLFLVHFPAALEYVDPSVRYPPGWFYDGKSEVRWSKTTTLQQTWGAMERLVDKGLARSIGVSNYQAQSVYDALIYARIKPATLQI 191          
BLAST of DY262523 vs. ExPASy Swiss-Prot
Match: DKGB_ECOLI (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli (strain K12) GN=dkgB PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.208e-17
Identity = 56/179 (31.28%), Postives = 94/179 (52.51%), Query Frame = 3
Query:  132 MPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVSFLKKYL 668
            +P  GLGT        +    +++ A++LGYR  DTA +Y  E  +G AIAE+   G+   R EL+I +K+W  +  ++ ++P+L++SL+ L+ +Y+DL +IHWP      S    +  E+F+        +A+ E +  G T+ IG+SNF+   +   +A       A     L  YL
Sbjct:    3 IPAFGLGTFRLK---DDVVISSVITALELGYRAIDTAQIYDNEAAVGQAIAES---GV--PRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWP------SPNDEVSVEEFM--------QALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYL 159          
BLAST of DY262523 vs. ExPASy Swiss-Prot
Match: Y4149_MYCPA (Uncharacterized oxidoreductase MAP_4149 OS=Mycobacterium paratuberculosis GN=MAP_4149 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.884e-17
Identity = 68/187 (36.36%), Postives = 97/187 (51.87%), Query Frame = 3
Query:   87 SISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQV 647
            S +IP V L    ++ PVLGLG A       E T+ ++L A++ G R  DTA  Y  E  +G AIA   ++GI   R+ELF+ +KL  S         + ++SL+ L L+Y+DLY+IHWP  +  G Y      E F         E M E +  G+ ++IGVSNF+   L  ++      PA NQV
Sbjct:   11 SSAIPTVALNDEAKK-PVLGLGVAKL---SDEETESSVLAALEAGCRLIDTAASYGNEAAVGRAIA---ASGI--PREELFVTTKLGTSRQGFHSAQESCKESLDRLGLDYLDLYLIHWPAPTL-GKY-----VESF---------EGMIEARERGHVRSIGVSNFTEDLLATVIEETNEVPAVNQV 173          
BLAST of DY262523 vs. ExPASy Swiss-Prot
Match: I3ACR_SCHPO (NAD/NADP-dependent indole-3-acetaldehyde reductase OS=Schizosaccharomyces pombe GN=SPAC19G12.09 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.434e-17
Identity = 57/178 (32.02%), Postives = 85/178 (47.75%), Query Frame = 3
Query:  132 MPVLGLGTAASPFSGSETTKL---AILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVP-ALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVSF 653
            +P  G+GTA       E  +    ++  A+  G+ H D A +Y  E+ +G A+ EA        R +LFI SK+     H    +P AL +SL  L  +Y+DLY++H P+        F  KK     +     W+AME     G   ++GVSNF    L ++L T+ I P  NQ+ F
Sbjct:   12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALKEANVP-----RSKLFITSKVM----HNVDNIPEALNESLRKLGTDYLDLYLLHSPIP-------FYEKK-----IPISEGWKAMETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEF 168          

HSP 2 Score: 30.4166 bits (67), Expect = 3.434e-17
Identity = 13/32 (40.62%), Postives = 20/32 (62.50%), Query Frame = 1
Query:  892 QVCLRWAYEQGVCVGVKSFNKEKMKENLNYST 987
            Q+ L+WAY +GV     +   E+MKE LN+ +
Sbjct:  224 QILLKWAYSKGVIPITTTSKIERMKECLNFDS 255          

HSP 3 Score: 22.3274 bits (46), Expect = 3.434e-17
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  749 LREFCKAKDIQLAAYAPL 802
            L EFC++K I +  Y PL
Sbjct:  179 LVEFCQSKGIIVEGYGPL 196          
BLAST of DY262523 vs. ExPASy Swiss-Prot
Match: YKW2_SCHPO (Uncharacterized oxidoreductase P32A8.02 OS=Schizosaccharomyces pombe GN=SPAP32A8.02 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.250e-16
Identity = 50/152 (32.89%), Postives = 76/152 (50.00%), Query Frame = 3
Query:  198 ILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLW-CSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILAT-AKIPPAANQV 647
            + +A+  GYRH DTA +Y  E   G AI +      +K R ++F+ SKL  CSD +      A++ SL +L   YIDL++I  P   K                   + W+AMEE  + G  +++GVSN+  K L ++ A+  K  P  NQ+
Sbjct:   38 VTQALDSGYRHIDTAAVYGNEDICGKAIVDWCEKNNVK-RTDIFLTSKLANCSDYYSTRA--AIRSSLHHLG-TYIDLFLIQSPAGGKKSRI---------------ASWKAMEEFVDSGDIRSVGVSNYGVKHLQELYASNPKFYPCVNQI 170          

HSP 2 Score: 30.8018 bits (68), Expect = 1.250e-16
Identity = 10/30 (33.33%), Postives = 22/30 (73.33%), Query Frame = 2
Query:  713 KVEMNPLWQQNKLREFCKAKDIQLAAYAPL 802
            ++E++P   Q+ + ++C++ DI + AY+PL
Sbjct:  169 QIELHPFLSQDDIVKYCQSHDIAIEAYSPL 198          

HSP 3 Score: 28.4906 bits (62), Expect = 1.250e-16
Identity = 14/39 (35.90%), Postives = 23/39 (58.97%), Query Frame = 1
Query:  862 IAEVKGKDVAQVCLRWAYEQGVCVGVKSFNKEKMKENLN 978
            IA+     VAQ+ +RW+ ++G    +KS  KE M  +L+
Sbjct:  212 IAKKLNISVAQLLIRWSLQKGYIPIIKSTKKEHMLSDLD 250          
BLAST of DY262523 vs. ExPASy Swiss-Prot
Match: DKGB_ECO57 (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli O157:H7 GN=dkgB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.441e-16
Identity = 56/179 (31.28%), Postives = 93/179 (51.96%), Query Frame = 3
Query:  132 MPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVSFLKKYL 668
            +P  GLGT        +    ++  A++LGYR  DTA +Y  E  +G AIAE+   G+   R EL+I +K+W  +  ++ ++P+L++SL+ L+ +Y+DL +IHWP      S    +  E+F+        +A+ E +  G T+ IG+SNF+   +   +A       A     L  YL
Sbjct:    3 IPAFGLGTFRLK---DDVVISSVKTALELGYRAIDTAQIYDNEAAVGLAIAES---GV--PRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWP------SPNDEVSVEEFM--------QALLEAKKEGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYL 159          
BLAST of DY262523 vs. ExPASy Swiss-Prot
Match: KAR_YEAST (NADPH-dependent alpha-keto amide reductase OS=Saccharomyces cerevisiae GN=YDL124W PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.162e-14
Identity = 51/189 (26.98%), Postives = 84/189 (44.44%), Query Frame = 3
Query:  111 LKSSNRRMPVLGLGTAASPFSGSETTKL-------AILEAMKL-GYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVSF 653
            L + N+   +  +GT    +   ET           I+ A+KL G  H D A +Y+T   +G A++        K R+ +F+  K        +     L  +L+ +  +Y+DLY++H P  SK           +   +  +  W+ ME+    G  K IGVSNF+ + L  IL  A++ P  NQ+ F
Sbjct:   10 LNNGNKIPAIAIIGTGTRWYKNEETDATFSNSLVEQIVYALKLPGIIHIDAAEIYRTYPEVGKALSLTE-----KPRNAIFLTDKYSPQIKMSDSPADGLDLALKKMGTDYVDLYLLHSPFVSK-----------EVNGLSLEEAWKDMEQLYKSGKAKNIGVSNFAVEDLQRILKVAEVKPQVNQIEF 182          

HSP 2 Score: 28.4906 bits (62), Expect = 2.162e-14
Identity = 13/36 (36.11%), Postives = 21/36 (58.33%), Query Frame = 2
Query:  704 QFQKVEMNPLWQQNK--LREFCKAKDIQLAAYAPLG 805
            Q  ++E +P  Q     + +FC+  DI + AY+PLG
Sbjct:  176 QVNQIEFSPFLQNQTPGIYKFCQEHDILVEAYSPLG 211          

HSP 3 Score: 23.0978 bits (48), Expect = 2.162e-14
Identity = 11/41 (26.83%), Postives = 21/41 (51.22%), Query Frame = 1
Query:  856 ERIAEVKGKDVAQVCLRWAYEQGVCVGVKSFNKEKMKENLN 978
            + ++E   K  AQ+ LRW  ++GV     S   +++ +  N
Sbjct:  230 KELSEKYIKSEAQIILRWVTKRGVLPVTTSSKPQRISDAQN 270          
BLAST of DY262523 vs. ExPASy Swiss-Prot
Match: YER5_SCHPO (Uncharacterized oxidoreductase C2F3.05c OS=Schizosaccharomyces pombe GN=SPAC2F3.05c PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.301e-14
Identity = 44/153 (28.76%), Postives = 76/153 (49.67%), Query Frame = 3
Query:  195 AILEAMKLGYRHFDTATLYQTEQPLGDAIAEAL-STGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDIL-ATAKIPPAANQV 647
            ++  A++ GYRH D+A +Y  E   G AI + +  TG    R++++  SKL     ++   + ++  S++   L YIDL+++H P   +  S                  W+A+E+    G  +AIGVSNF    + ++L +  KI P  NQ+
Sbjct:   32 SVYAALQCGYRHIDSAQMYHNEADCGRAILKFMEETG--TKREDIWFTSKLNDLSGYKS-TLSSIDASVKACGLGYIDLFLLHSPYGDRIES------------------WKALEKGVEEGKLRAIGVSNFGPHHIQELLDSHPKIIPCVNQI 163          

HSP 2 Score: 40.0466 bits (92), Expect = 2.301e-14
Identity = 20/61 (32.79%), Postives = 39/61 (63.93%), Query Frame = 2
Query:  713 KVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKELQKSKGKTLPR 895
            ++E++P   Q K+ ++C++K IQLAAYAPL   G  +G+ +++   +  +  KS+ + + R
Sbjct:  162 QIELHPFCSQQKVVDYCESKGIQLAAYAPL-VHGEKFGNKQLL--AIASKYNKSEAQIMIR 219          
BLAST of DY262523 vs. ExPASy Swiss-Prot
Match: DKGB_CORSS (2,5-diketo-D-gluconic acid reductase B OS=Corynebacterium sp. (strain SHS752001) GN=dkgB PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 2.527e-13
Identity = 56/184 (30.43%), Postives = 83/184 (45.11%), Query Frame = 3
Query:   96 IPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQV 647
            +P++P  S N   P    G       G E    A++ A+  GYR  DTA  Y+ E  +G A+  +        RDEL +ASK+      R   V +++ SL+ L L+ IDL +IHWP  S                  +   W  M + +  G  ++IGVSNF+   L  ++    + PA NQV
Sbjct:    1 MPNIPTISLNDGRPFAEPGLGTYNLRGDEGVA-AMVAAIDSGYRLLDTAVNYENESEVGRAVRASSV-----DRDELIVASKIPGRQHGRAEAVDSIRGSLDRLGLDVIDLQLIHWPNPSVG---------------RWLDTWRGMIDAREAGLVRSIGVSNFTEPMLKTLIDETGVTPAVNQV 163          
The following BLAST results are available for this feature:
BLAST of DY262523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
XYL1_TRIRE2.208e-1733.13NAD(P)H-dependent D-xylose reductase OS=Trichoderm... [more]
DKGB_ECOLI2.208e-1731.282,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
Y4149_MYCPA2.884e-1736.36Uncharacterized oxidoreductase MAP_4149 OS=Mycobac... [more]
I3ACR_SCHPO3.434e-1732.02NAD/NADP-dependent indole-3-acetaldehyde reductase... [more]
YKW2_SCHPO1.250e-1632.89Uncharacterized oxidoreductase P32A8.02 OS=Schizos... [more]
DKGB_ECO572.441e-1631.282,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
KAR_YEAST2.162e-1426.98NADPH-dependent alpha-keto amide reductase OS=Sacc... [more]
YER5_SCHPO2.301e-1428.76Uncharacterized oxidoreductase C2F3.05c OS=Schizos... [more]
DKGB_CORSS2.527e-1330.432,5-diketo-D-gluconic acid reductase B OS=Coryneba... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AH03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262523 ID=DY262523; Name=DY262523; organism=Citrus clementina; type=EST; length=1243bp
ACTTGTAACTGTAACATATTGGAGAAAAAAATTAATCTGGCTGGAGCTTT
GCCGCAACAAGAATGGATCAGGGTTCAGAGATGGGTTCTATCAGTATCCC
GGATGTTCCTCTGAAGTCGAGCAACAGGAGAATGCCGGTCTTGGGCCTCG
GCACGGCGGCCTCTCCGTTTTCAGGATCAGAAACGACTAAACTGGCAATT
CTTGAAGCAATGAAGCTTGGTTACAGACACTTCGACACGGCTACGCTCTA
TCAAACGGAGCAGCCGCTTGGTGATGCAATAGCTGAAGCACTCTCTACCG
GCATAATTAAGAGTCGAGATGAACTTTTTATCGCATCGAAGCTTTGGTGC
AGCGACGCTCATCGTGAACTCGTTGTTCCTGCCCTTCAGAAGAGCTTAGA
GAATCTTCAGTTGGAGTACATTGATCTCTATGTCATTCATTGGCCCGTGA
GCTCGAAGCCGGGGAGCTACGAGTTTCCGATAAAGAAAGAAGACTTCCTT
CCCATGGACTTCAAGTCTGTCTGGGAAGCCATGGAAGAATGCCAAAATCT
TGGCTATACCAAGGCCATTGGTGTCAGCAATTTCTCATGTAAAAAGCTTG
GTGACATCCTTGCCACAGCGAAGATTCCTCCTGCTGCGAATCAAGTGAGT
TTCTTAAAGAAATATTTGTGAGTTTTCTGAGTGGATTTTATCTGAAGTTT
TTGCAATTTCAAAAGGTGGAAATGAACCCACTATGGCAACAAAACAAACT
GAGAGAGTTCTGCAAGGCTAAAGATATCCAATTGGCAGCTTATGCGCCCC
TAGGAGCCAGAGGAACCATTTGGGGCAGCAATAGAGTTATGGAATGTGAG
GTGCTGAAAGAATTGCAGAAGTCAAAGGGAAAGACGTTGCCCAGGTGTGT
TTAAGATGGGCATACGAGCAAGGGGTCTGTGTGGGGGTAAAGAGTTTCAA
CAAGGAGAAGATGAAAGAAAACTTGAACTATTCAACTGGGAAATAACCGA
TGAAGAGACCAAGAAAATCATGATTTCCAACAAACCGAGGGTGCCTTGGA
AAGATTACTTCTTAACCAAAGGACCCCTCCAAAAAATTAAGAAATTTGGG
GAATGAAAAAACTTAATTTAAAAGTTGATATATTCTCTAGAGGTTCACCC
CGCTTTTTTTTAAGCGCCAAAGGTTTTTTTATATTCAATTGATATCCCTT
TTTTTTAAATTTGGCTTTTTTTCTTTTTTTTCCAAAACCCTTT
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