DY262539

Overview
NameDY262539
Unique NameDY262539
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1260
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262539 vs. ExPASy Swiss-Prot
Match: C3H57_ARATH (Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 7.206e-48
Identity = 97/206 (47.09%), Postives = 126/206 (61.17%), Query Frame = 1
Query:  298 EESMWQSDLK------VNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPAS--APQFYPPVQSPTVPMAEQYGGASTSLRVARPPLL--ASSYVQGAYGPVLFSPG 885
            + +MWQ +L       V+ SYP+RHG PDC +Y+RTG+C +G  CR+NHP +           G+YP+R G+P C+FYLKTGTCKFG +CKFHHP++  G    V +N+  YPLRP E +CSY+L+ GQCKFG TCKF+HPQ   T+L  S      Y  +QS T      Y  + TS  VA PP L   S +  G+ G  LFS G
Sbjct:   19 QNAMWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLT--GQPSYSWSRTSF-VANPPRLQDPSGFASGSQGG-LFSSG 220          

HSP 2 Score: 100.138 bits (248), Expect = 2.854e-20
Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 1
Query:  475 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHP 702
            +P+RPG+P CQFY+KTG CKFG  CKFHHP+          L+  G PLRPGE  C +Y + G CKFG +CKF HP
Sbjct:  240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 315          

HSP 3 Score: 85.1149 bits (209), Expect = 9.499e-16
Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1
Query:  340 YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTG-DYPDRPGEPICQFYLKTGTCKFGASCKFHHP 564
            +P+R G P+C FYM+TG C +G  C+++HPR+          +    P RPGEP+C FY + G CKFG SCKF HP
Sbjct:  240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 315          
BLAST of DY262539 vs. ExPASy Swiss-Prot
Match: C3H3_ARATH (Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis thaliana GN=At1g04990 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 3.242e-40
Identity = 86/209 (41.15%), Postives = 112/209 (53.59%), Query Frame = 1
Query:  322 LKVNES-------YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQ---SPTVPMAEQYGGASTSLRVARPPLLASSYVQGAYGPVLFSP--GVVPFSGWIP 912
            +KVNE+       YP R G  DC FY+RTG+CGYG  CRYNHP +            + P+R G+P C+++LKTG CK+G +CK+HHPK   G+   V  N+ G P+R GEK C YYL+TG C+FG+ CKFHHPQP      A     +P      +  + M   YG             L    V  +Y P+L SP  G +P  GW P
Sbjct:   31 MKVNETGVEELNPYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKE--ELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQP-VMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADLRYASGLTMMSTYG------------TLPRPQVPQSYVPILVSPSQGFLPPQGWAP 224          

HSP 2 Score: 71.633 bits (174), Expect = 1.087e-11
Identity = 36/87 (41.38%), Postives = 47/87 (54.02%), Query Frame = 1
Query:  493 EPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVP---LNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQ------PAGTSLP 726
            +P C+F++ TGTCK+G  CK+ HP   G  +S  P   +N +  P RPG+  C  +   G CKFG  CKF HP          TSLP
Sbjct:  264 QPECRFFMNTGTCKYGDDCKYSHP---GVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLP 347          

HSP 3 Score: 68.5514 bits (166), Expect = 9.201e-11
Identity = 31/80 (38.75%), Postives = 40/80 (50.00%), Query Frame = 1
Query:  328 VNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPR-NXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHP 564
            +N    +    P+C F+M TG C YGD C+Y+HP                 P RPG+P C  +   G CKFG +CKF HP
Sbjct:  254 LNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHP 333          
BLAST of DY262539 vs. ExPASy Swiss-Prot
Match: C3H26_ARATH (Zinc finger CCCH domain-containing protein 26 OS=Arabidopsis thaliana GN=ZFN2 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.193e-34
Identity = 83/210 (39.52%), Postives = 109/210 (51.90%), Query Frame = 1
Query:  322 LKVNES-------YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYGGASTSL------RVARPPLLASSYVQGAYGPVLFSP--GVVPFSGW 906
            +KVNE        YP R G  DC F++RTG CGYG+ CRYNHP                P+R G+P C+    TG CK+G +CK+HHPK   G+   V  N+ G P+R GEK C YY++TG C+FG+ CKFHHP P   S P++    Y     P+V      G    SL       + RP +  S     AY P + +P  G++P  GW
Sbjct:   28 MKVNEDNMEQSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHPLTNLPQGIIYYRD-QLPERVGQPDCE----TGACKYGPTCKYHHPKDRNGA-GPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHPHP--HSQPSNGHSAYAMSSFPSVGFPYASGMTMVSLPPATYGAIPRPQVPQSQ----AYMPYMVAPSQGLLPPQGW 225          

HSP 2 Score: 73.559 bits (179), Expect = 2.860e-12
Identity = 43/118 (36.44%), Postives = 55/118 (46.61%), Query Frame = 1
Query:  502 CQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQ---------PAGTSLPASAPQFYPPVQSPTVPMAEQYGGASTSLRVARPP 828
            C+F++ TGTCK+G  CK+ HPK          LN    P RPG+  C  +   G CKFG  CKF H            A +SLP   P + PPV              ST+LR++ PP
Sbjct:  267 CRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNPYNNTGLAMSSLPTPYP-YAPPV--------------STNLRISSPP 369          
BLAST of DY262539 vs. ExPASy Swiss-Prot
Match: C3H37_ARATH (Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis thaliana GN=HUA1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.235e-31
Identity = 71/172 (41.28%), Postives = 93/172 (54.07%), Query Frame = 1
Query:  331 NESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHS---------GGSMS-----------HVPL------NIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPT 768
            NE YP+R G PDC +Y++T  C YG +C++NHPR           +   P+RP EP+C FY+KTG CKFG SCKFHHPK           G S+            HV        N  G P+R GE +C +YLKTG CK+G TC+++HP+     +P +A   Y  V S T
Sbjct:  219 NEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDS--LPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERT-AFIPQAAGVNYSLVSSNT 387          

HSP 2 Score: 129.413 bits (324), Expect = 4.392e-29
Identity = 68/181 (37.57%), Postives = 95/181 (52.49%), Query Frame = 1
Query:  211 LYGRNNTSRNGSQSGHQPQWSPTDQATGLEESMWQSDLKVNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHP------RNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASA 735
            L G +NT       G    W  TD  T   +    S L +   YPQR G  DC  YM+T  C +G+ CR++HP                    +YP+RPGEP C +Y+KT  CK+G+ CKF+HP+           ++   P RP E  C++Y+KTG+CKFG++CKFHHP+     LP+S+
Sbjct:  137 LLGAHNTI------GQTEAWYTTDYFTKRPKLESTSHLPI---YPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSL---PERPSEPMCTFYMKTGKCKFGLSCKFHHPK--DIQLPSSS 303          

HSP 3 Score: 123.635 bits (309), Expect = 2.410e-27
Identity = 62/168 (36.90%), Postives = 77/168 (45.83%), Query Frame = 1
Query:  331 NESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXX-----------------------------------TGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMS-------HVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQP 708
            ++  P R G  DC FY++TG C YG  CRYNHP                                               +  YP RPG+  C +Y+KTG CKFG  CKFHHP     +M+       +V L++ GYP R G   C YY+KTG CK+G TCKF HP P
Sbjct:  334 SKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVTPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPP 501          

HSP 4 Score: 85.1149 bits (209), Expect = 9.499e-16
Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 1
Query:  286 ATGLEESMWQSDLKV-NESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHP--------RNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHP 564
            AT   +++ Q  L V + +YPQR G  +C +YM+TG C +G+RC+++HP        +              YP R G   C +Y+KTGTCK+GA+CKF HP
Sbjct:  398 ATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHP 499          
BLAST of DY262539 vs. ExPASy Swiss-Prot
Match: C3H8_ORYSJ (Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=Os01g0616400 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 8.850e-30
Identity = 72/212 (33.96%), Postives = 94/212 (44.34%), Query Frame = 1
Query:  241 GSQSGHQPQWSPTDQATGLEESMWQSDLKVNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTGDY--------PDRPGEPICQFYLKTGTCKFGASCKFHHPK---------------------------HSGGSMSHVPL------NIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPP 753
            GS     PQW P       +E        V ESYP++ G PDC F+M+TG C +G +C++NHP+              +        P RP EP+C FY KTG CKF A CKF+HPK                            S  +    P+      N  G P+RPGE +C +Y+K G CKFG TC+F+HP     + P    Q   P
Sbjct:  124 GSCKFDHPQWVPEGGIPNWKEQA----ANVEESYPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILP 331          

HSP 2 Score: 121.324 bits (303), Expect = 1.196e-26
Identity = 63/170 (37.06%), Postives = 90/170 (52.94%), Query Frame = 1
Query:  340 YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPR------NXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMS-------HVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYGGASTSL 810
            YPQR G  DC FYM T  C +G  C+++HP+                    YP++ GEP C F++KTG CKFG+ CKF+HPK    +++       H+  +    P+RP E  CS+Y KTG+CKF   CKF+HP+     +P+S  +   P  + TV      G A+ S+
Sbjct:  102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPK--DIEIPSSQNE---PESAVTVEGETDIGSAADSV 266          

HSP 3 Score: 105.531 bits (262), Expect = 6.792e-22
Identity = 56/169 (33.14%), Postives = 69/169 (40.83%), Query Frame = 1
Query:  331 NESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTG----------------------------------DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGG---------SMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQP 708
            ++  P R G  DC FYM+ G C +G  CR+NHP                                                 YP RPG  +C FY+KTG CKF   CKFHHP              +   V L + G P R     C++Y+KTG CKFG+ CKF HP P
Sbjct:  282 SKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPESMLLNSSANFMQGFDFHAAHMPVGPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHPPP 450          
BLAST of DY262539 vs. ExPASy Swiss-Prot
Match: C3H43_ORYSJ (Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 7.492e-29
Identity = 62/150 (41.33%), Postives = 81/150 (54.00%), Query Frame = 1
Query:  325 KVNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTGD-YPDRPGEPICQFYLKTGTCKFGASCKFHHP---------KHSGGSMSH------------VPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQP 708
            KV E +P+R G PDC +Y++ G C +G  C YNHP              + +P RPGEP C +Y+K G+CKFG +C+F+HP         ++  G+  H            V LN+ G PLRPG   CSYY+  G CKFG  CKF HP P
Sbjct:   36 KVEEQHPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDP 185          

HSP 2 Score: 74.7146 bits (182), Expect = 1.284e-12
Identity = 35/104 (33.65%), Postives = 48/104 (46.15%), Query Frame = 1
Query:  319 DLKVNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTGD----------------------YPDRPGEPICQFYLKTGTCKFGASCKFHHP 564
            D K  E +P+R G PDC +Y++ G C +G  CR+NHP            +G+                       P RPG  +C +Y+  G CKFG +CKF HP
Sbjct:   80 DKKPAEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 183          
BLAST of DY262539 vs. ExPASy Swiss-Prot
Match: C3H42_ORYSJ (Zinc finger CCCH domain-containing protein 42 OS=Oryza sativa subsp. japonica GN=Os06g0519400 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.847e-28
Identity = 62/143 (43.36%), Postives = 75/143 (52.45%), Query Frame = 1
Query:  334 ESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPK------------------HSGGSMS--HVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHP 702
            + YP+R GVPDC +Y+  G C +G RC YNHP              ++P RPGE  C  YL+ G CK+G +C+F+HP                   HS G     HV LN  G PLRPG   CSYY+  G CKFG  CKFHHP
Sbjct:   74 QEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKHAGGCDKL----EHPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHP 212          
BLAST of DY262539 vs. ExPASy Swiss-Prot
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 3.718e-28
Identity = 57/133 (42.86%), Postives = 74/133 (55.64%), Query Frame = 1
Query:  316 SDLKVNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHP--RNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQP 708
            S+ ++   YP R    DC FYMRTG C YG  C++NHP  R             +  + P    C++Y +TG CK+G SC+F H K      S   LN  G P+RPGEKEC +Y++ G CKFG  CKF+HP P
Sbjct:   90 SEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDP 222          

HSP 2 Score: 89.7373 bits (221), Expect = 3.857e-17
Identity = 44/107 (41.12%), Postives = 58/107 (54.21%), Query Frame = 1
Query:  472 DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYG 792
            ++P+RP +P C +YLKTG CKF   CK+HHPK+     +    N  G PLRP +  C++Y + G CKFG  C+F H          S P  + P  S TV  A Q G
Sbjct:  330 EFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDH----------SIPPTFSPSSSQTVE-ARQVG 425          

HSP 3 Score: 69.3218 bits (168), Expect = 5.394e-11
Identity = 30/87 (34.48%), Postives = 48/87 (55.17%), Query Frame = 1
Query:  304 SMWQSDLKVNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTG-DYPDRPGEPICQFYLKTGTCKFGASCKFHH 561
            S +Q  + V E +P+R   P+C +Y++TG C +  +C+Y+HP+N               P RP + +C  Y + G CKFG +C+F H
Sbjct:  320 SQYQHQMSVEE-FPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDH 405          
BLAST of DY262539 vs. ExPASy Swiss-Prot
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g48440 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 6.342e-28
Identity = 61/142 (42.96%), Postives = 78/142 (54.93%), Query Frame = 1
Query:  331 NES---YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEP---ICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQP---AGTSLPA 729
            NES   YP R G  DC FYMRTG C +G  C++NHP              +  D  G+     C++Y +TG CK+G +C+F+H     G  S   LN  G PLRPGE EC YY++ G CK+G  CKF+HP P    GT  P+
Sbjct:  101 NESENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPS 242          

HSP 2 Score: 92.0485 bits (227), Expect = 7.771e-18
Identity = 40/94 (42.55%), Postives = 55/94 (58.51%), Query Frame = 1
Query:  472 DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPP 753
            ++P+RP +P C +Y+KTG CKF  +CK+HHPK+    +    LN  G PLRP +  C+YY + G CKFG  C+F H      S  +S     PP
Sbjct:  342 EFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVEPP 435          

HSP 3 Score: 70.4774 bits (171), Expect = 2.421e-11
Identity = 45/144 (31.25%), Postives = 68/144 (47.22%), Query Frame = 1
Query:  178 TSPFNKKGTMELYGRNNTSRNGSQSGHQPQ--------WSPTD----QATGLEESMWQSDLKVN---ESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTG-DYPDRPGEPICQFYLKTGTCKFGASCKFHH 561
            TSPF      + +G   TS+N   +G+Q          +SP+       +  E SM  S  +     E +P+R   P+C +YM+TG C +   C+Y+HP+N               P RP + IC +Y + G CKFG +C+F H
Sbjct:  276 TSPFIPVMLSQTHGV--TSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDH 417          
BLAST of DY262539 vs. ExPASy Swiss-Prot
Match: C3H65_ORYSJ (Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica GN=Os12g0278800 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 8.592e-17
Identity = 37/75 (49.33%), Postives = 46/75 (61.33%), Query Frame = 1
Query:  502 CQFYLKTGTCKFGASCKFHHPKHSGGSMS--HVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTS 720
            C++Y   G CKFG +CK+ H     G      V LN  G PLRPGEKEC YY++TG CK+   CKFHHP P+  +
Sbjct:  243 CKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVA 317          

HSP 2 Score: 87.0409 bits (214), Expect = 2.500e-16
Identity = 43/103 (41.75%), Postives = 62/103 (60.19%), Query Frame = 1
Query:  472 DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVP----LNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPT 768
            +YP+RPG+P CQ ++K+G CKF   CK+HHP+      S VP    L+  G P++P +  C+YY + G CKFG  C ++HP    + +PA+ P    P Q PT
Sbjct:  429 EYPERPGQPECQHFVKSGFCKFRMKCKYHHPR------SPVPPAGALSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNF-SPVPAAGPPLL-PAQYPT 523          

HSP 3 Score: 76.6406 bits (187), Expect = 3.379e-13
Identity = 33/101 (32.67%), Postives = 56/101 (55.45%), Query Frame = 1
Query:  331 NESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGE 633
            +E YP+R G P+C  ++++G C +  +C+Y+HPR+           G  P +P +P+C +Y + G CKFG +C ++HP       +  P+   G PL P +
Sbjct:  427 SEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLG-LPIKPDQPVCTYYGRYGVCKFGPACAYNHP------FNFSPVPAAGPPLLPAQ 520          
The following BLAST results are available for this feature:
BLAST of DY262539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
C3H57_ARATH7.206e-4847.09Zinc finger CCCH domain-containing protein 57 OS=A... [more]
C3H3_ARATH3.242e-4041.15Zinc finger CCCH domain-containing protein 3 OS=Ar... [more]
C3H26_ARATH1.193e-3439.52Zinc finger CCCH domain-containing protein 26 OS=A... [more]
C3H37_ARATH1.235e-3141.28Zinc finger CCCH domain-containing protein 37 OS=A... [more]
C3H8_ORYSJ8.850e-3033.96Zinc finger CCCH domain-containing protein 8 OS=Or... [more]
C3H43_ORYSJ7.492e-2941.33Zinc finger CCCH domain-containing protein 43 OS=O... [more]
C3H42_ORYSJ2.847e-2843.36Zinc finger CCCH domain-containing protein 42 OS=O... [more]
C3H67_ARATH3.718e-2842.86Zinc finger CCCH domain-containing protein 67 OS=A... [more]
C3H43_ARATH6.342e-2842.96Zinc finger CCCH domain-containing protein 43 OS=A... [more]
C3H65_ORYSJ8.592e-1749.33Zinc finger CCCH domain-containing protein 65 OS=O... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BA10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262539 ID=DY262539; Name=DY262539; organism=Citrus clementina; type=EST; length=1260bp
CAAAAAGCTCCATCACAGTGAAAGCATCTCCCATCTCTCCTCTTCTTCTC
CTTTTTCTTAGTATTATTCAACAAAACAACTCAATAGACACTCGATCGAA
CTCTACCAATCCTTCTAGAACGTTTGAGTATTTCTACGACGTCGTAGTTT
CTTCAAGTCCGTTTAGTCACTGTACATACAAGCCCCTTTAACAAAAAAGG
TACGATGGAGTTGTACGGTCGCAACAACACGTCTAGAAACGGGTCGCAAT
CGGGCCACCAACCTCAATGGAGCCCCACAGACCAAGCCACCGGGCTCGAA
GAATCGATGTGGCAATCGGACCTGAAGGTGAACGAATCTTACCCACAGCG
CCATGGCGTGCCGGACTGTGTGTTCTACATGCGAACTGGGGTCTGTGGAT
ACGGTGACAGGTGTCGTTACAATCACCCTCGCAATCGTGCTGCGGTTGAG
GCTGCTGTAAGGGCTACAGGAGATTATCCAGATCGACCAGGGGAACCCAT
ATGTCAGTTTTACTTGAAAACTGGAACCTGTAAATTTGGTGCATCCTGCA
AATTCCACCACCCAAAACATTCAGGTGGATCCATGAGTCATGTTCCACTG
AATATATATGGATACCCGCTACGACCGGGTGAGAAAGAATGCTCCTACTA
TTTGAAAACGGGGCAGTGCAAATTTGGTATAACTTGTAAATTCCATCATC
CTCAACCAGCTGGCACATCATTGCCGGCATCTGCACCTCAGTTTTATCCA
CCGGTGCAGTCTCCTACAGTTCCAATGGCTGAACAGTATGGGGGGGCATC
CACCAGCTTGAGGGTGGCGAGGCCTCCGCTTTTAGCTAGTTCTTATGTGC
AAGGAGCTTATGGTCCAGTGCTTTTTTCTCCGGGAGTAGTTCCTTTTTCT
GGCTGGATCCCTACTCGGCATCTGTAAGTCCTGTGTTATCTCCTGGTGCA
CAACCTGCAGTTGGGAGCTACTTCTCTAAATGGAGTAACTCAAATATTCT
TCTTCATGGCTGGCCTTTGGGGGGTTTATTCCTCCTTGCCCTCCCTGGTG
GTCCTTCGGGTAATGGGCAAAGGGAAAAATTTTTTCCGAGAAAACCAGAA
AAACGGAAGGGCCGAATTTTTTGAAAATGGGGGAGGGGGATTTGGGAATT
TTTTGGGGGTTTCTCTTCCCCCCCGGAGAGGGGGGTGGGCAAAAAAAAAA
AGGGGGCCCCCCCCCCCCCTTTGGTTCTCCCCTTCGCGCGTCGGGGGGGG
AGGCCCCCCT
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