DY262560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL2F_ARATH (RING-H2 finger protein ATL2F OS=Arabidopsis thaliana GN=ATL2F PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.480e-14 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 262 AVTLRAGLDPAILRKIPVVAFNQQDFK----DGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR 483 ++T GLD AI+ P +++ + G+ECAVC+ E ED E RL+P+C H FH +C+ +W HSTCPLCR Sbjct: 61 SITAVRGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCR 138
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL2E_ARATH (RING-H2 finger protein ATL2E OS=Arabidopsis thaliana GN=ATL2E PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.480e-14 Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 268 TLRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEP 528 + R GLD +R +PV + + + +C +CLS+ E+GE +++P C H FHV+C+D W S+ TCPLCR+ + G EP Sbjct: 111 SFRRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKDLGMQEP 197
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL1N_ARATH (RING-H2 finger protein ATL1N OS=Arabidopsis thaliana GN=ATL1N PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.480e-14 Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 280 GLDPAILRKIPVVAFNQQDF----KDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR 483 GLD +I+ P ++ K+ LEC+VCL+E ED E RL+PKC H FH CID W +SH+TCPLCR Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCR 186
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL4K_ARATH (RING-H2 finger protein ATL4K OS=Arabidopsis thaliana GN=ATL4K PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 3.239e-14 Identity = 42/109 (38.53%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 277 AGLDPAILRKIPVVAFNQQ-DFKD-GLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQE--SLESGYSTDS 591 +G+D + + +PV + K+ +CAVCL E E +K RLLPKC+H FH++CID W SHSTCPLCR+ + + S++ + S + ++++ + S E G DS Sbjct: 106 SGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDS 214
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL1O_ARATH (RING-H2 finger protein ATL1O OS=Arabidopsis thaliana GN=ATL1O PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 3.239e-14 Identity = 38/99 (38.38%), Postives = 53/99 (53.54%), Query Frame = 1 Query: 280 GLDPAILRKIPVVAFNQQD-FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQESLES 573 GL +I+ I + + + D + +C VCL+E E+ E RLLPKCNH FH+ CID W SH+ CPLCR + + VE+ S LE+ Sbjct: 151 GLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLEN 249
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL1F_ARATH (RING-H2 finger protein ATL1F OS=Arabidopsis thaliana GN=ATL1F PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.230e-14 Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 1 Query: 280 GLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVE-RSNNGNGEPSVEIDIQNSQ 558 GLD I+ P ++ +D +C++CL+E D + RL+ CNH FH CID+WF+ H TCP+CR +DVE R++ EID+ S+ Sbjct: 130 GLDSKIIESFPEYPYSVKDHGTD-QCSICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCRRELDVEDRTSLEKPLEVPEIDLVRSE 222
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL4I_ARATH (Putative RING-H2 finger protein ATL4I OS=Arabidopsis thaliana GN=ATL4I PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.525e-14 Identity = 47/137 (34.31%), Postives = 67/137 (48.91%), Query Frame = 1 Query: 253 QDPAVTLRAGLDPAILRKIPVVAFNQ----QDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSV-EIDIQNSQESLESGYSTDSPPNFPTNVLFWGNENLVSS 648 Q A + GL+ I+ P ++ ++ K GLECA+CL E + RLL C H FH ECID+WF+SH TCP+CR +D N +P+V E+ I QE+ + T + W + SS Sbjct: 72 QPEAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFESHRTCPVCRRDLDPPPPPE-NTKPTVDEMIIDVIQETSDDEEDDHHRQQTTTQIDTWPSSGQTSS 207
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL2K_ARATH (RING-H2 finger protein ATL2K OS=Arabidopsis thaliana GN=ATL2K PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 7.216e-14 Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 274 RAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVD 495 + GLD ++ +P ++ G ECAVCLS LE+ + AR+LP C H FHV C+D W + STCP+CR + Sbjct: 73 KRGLDSLVIASLPTFVVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAE 146
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL3J_ARATH (RING-H2 finger protein ATL3J OS=Arabidopsis thaliana GN=ATL3J PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 9.425e-14 Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 292 AILRKIPVVAFN----QQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNP-----------VDVERSNNGNGEPSVEIDI 546 ++L +P+ F+ + + +CAVCLS+ E ++ RLLP C H FH +CID+W S+ TCPLCR+P + V SNNG GE S ++I Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEI 191
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL1H_ARATH (RING-H2 finger protein ATL1H OS=Arabidopsis thaliana GN=ATL1H PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.608e-13 Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 280 GLDPAILRKIPVVAFNQ----QDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR 483 GL ++ P ++Q + K G+ECA+CL+E ED E RL+P C+H FH CID+W S STCP+CR Sbjct: 99 GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCR 170 The following BLAST results are available for this feature:
BLAST of DY262560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262560 ID=DY262560; Name=DY262560; organism=Citrus clementina; type=EST; length=1316bpback to top |