DY262560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL5L_ARATH (Putative RING-H2 finger protein ATL5L OS=Arabidopsis thaliana GN=ATL5L PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.581e-13 Identity = 44/120 (36.67%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 247 PGQDPAVTLRAGLDPAILRKIPVVAFNQ----QDFKDGLECAVCLSELEDGE-KARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQESLESGYSTDS 591 P Q P + GL+P I++ P+ F+ ++ K GLECA+CL E E+ RLL C H FH ECID W +S+ TCP+CR +D N E +E+ +N+ E+ + ++ S Sbjct: 77 PVQPP---VNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLDPNAPENIK-ELIIEVIQENAHENRDQEQTSTS 192
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL3I_ARATH (RING-H2 finger protein ATL3I OS=Arabidopsis thaliana GN=ATL3I PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 4.677e-13 Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 1 Query: 277 AGLDPAILRKIPVVAFNQQ--DFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR 483 +GLD + +PV + + +CAVCL+E D +K RLLP C+H FH+ CID W S+STCPLCR Sbjct: 179 SGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCR 249
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL2L_ARATH (RING-H2 finger protein ATL2L OS=Arabidopsis thaliana GN=ATL2L PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.677e-13 Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 274 RAGLDPAILRKIPVVAFNQQD--FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVD 495 + GL+P ++ +P D ECAVCLS L++ +KAR LP C H FHV+C+D W + STCP+CR V+ Sbjct: 79 KRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVE 154
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL4B_ARATH (Putative RING-H2 finger protein ATL4B OS=Arabidopsis thaliana GN=ATL4B PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 6.109e-13 Identity = 36/100 (36.00%), Postives = 54/100 (54.00%), Query Frame = 1 Query: 274 RAGLDPAILRKIPVVAFNQ----QDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQE 561 R GL+ ++ P+ +++ + K G+ECA+CLSE D E R +P C+H FH CID+W S STCP CR + ++ G P D++ E Sbjct: 92 RRGLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACRANLSLK---PGESYPYPITDLETGNE 188
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL1C_ARATH (RING-H2 finger protein ATL1C OS=Arabidopsis thaliana GN=ATL1C PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 6.109e-13 Identity = 34/76 (44.74%), Postives = 45/76 (59.21%), Query Frame = 1 Query: 268 TLRAGLDPAILRKIPVVAFNQQDF----KDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR 483 T GLD +++ P ++ K+ LEC VCL+E ED E RL+P+C H FH CID W +S +TCPLCR Sbjct: 85 TTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCR 160
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL1L_ARATH (RING-H2 finger protein ATL1L OS=Arabidopsis thaliana GN=ATL1L PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 7.978e-13 Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 1 Query: 259 PAVTLRAGLDPAILRKIPVVAFNQQDFKDGL--ECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRN 486 P G+ L+ V+++ + GL ECA+CLSE E+ +LLP C+HGFHV CID W SHS+CP CR+ Sbjct: 97 PVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRH 174
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL5I_ARATH (RING-H2 finger protein ATL5I OS=Arabidopsis thaliana GN=ATL5I PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.042e-12 Identity = 35/80 (43.75%), Postives = 46/80 (57.50%), Query Frame = 1 Query: 277 AGLDPAILRKIPVVAFNQQDFKDG-----------LECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR 483 +GLD A + +PV + + G +CAVCL E + +K RLLP C+H FH+ CID W QS+STCPLCR Sbjct: 106 SGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCR 185
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL2A_ARATH (RING-H2 finger protein ATL2A OS=Arabidopsis thaliana GN=ATL2A PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.042e-12 Identity = 35/88 (39.77%), Postives = 46/88 (52.27%), Query Frame = 1 Query: 343 DGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQESLESGYSTDSPPNFP 606 D ECA+CL++ DGE+ R+LP C H FHVECID W S S+CP CR + R + + E+ Q + ST P P Sbjct: 98 DSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTPVRCDRCGHASTAEMKDQAHRHQHHQHSSTTIPTFLP 185
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: RN167_RAT (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.361e-12 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 298 LRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWF-QSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQESLESGYSTDSPPNFPTNVL 618 L++IP + + D D CA+CL E EDG+K R+LP C H +H C+D W Q+ TCP+C+ PV + G G+ E + Q +E + G D P + T +L Sbjct: 213 LKQIPTHDYQKGDEYD--VCAICLDEYEDGDKLRILP-CAHAYHSRCVDPWLTQTRKTCPICKQPV-----HRGPGDEEQEEETQGQEEEGDEGEPRDQPASEWTPLL 312
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL5N_ARATH (Putative RING-H2 finger protein ATL5N OS=Arabidopsis thaliana GN=ATL5N PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.960e-12 Identity = 44/114 (38.60%), Postives = 61/114 (53.51%), Query Frame = 1 Query: 277 AGLDPAILRKIPVVAFN-----QQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSV-----EIDIQNSQESLESGYSTD 588 A +D + + +P++ + + D D CAVCL E ++ RLLPKC+H FHVECID W ++STCPLCR+ + + G S E D NSQ+S S TD Sbjct: 94 AEIDQSFIDALPLLHYKTMIGLRHDLSD---CAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNL-LLLGLTGTASSSTIVLVHESDGDNSQDSDSSFMLTD 203 The following BLAST results are available for this feature:
BLAST of DY262560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262560 ID=DY262560; Name=DY262560; organism=Citrus clementina; type=EST; length=1316bpback to top |