DY262644

Overview
NameDY262644
Unique NameDY262644
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1190
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY262644 vs. ExPASy Swiss-Prot
Match: S35E1_DROME (Solute carrier family 35 member E1 homolog OS=Drosophila melanogaster GN=CG14621 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.563e-15
Identity = 55/192 (28.65%), Postives = 92/192 (47.92%), Query Frame = 3 
Query:  393 WYFLNVIFNILNKRIYNYFPYP**VRFVGFTLPISFCLTM*ILSKILFRFTYESLFLCSFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKFLKLLIPVAVCHALGHVTSNLSFAAVAVSFTHTIKALEPFFNAGASQFILGPQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFINAMISNYRFTTEYLLQK 968
            WY ++   N++ K + N FP+P                            T   + LCS    I L  G  + L  W +   +  P    + +L++P+A+   L  VTS++S   V VS+ HT+KA  P F    ++   G + P  ++LSL P++ GV +A++TE+SF+  G I+A+IS   F+ + +  K
Sbjct:   21 WYVISSSNNVIGKMVLNEFPFP---------------------------MTVTLVQLCS----ITLYSGPFFNL--WRIRKYQDIP-RPYYYRLIVPLALGKLLASVTSHISLWKVPVSYAHTVKATMPLFTVVLTRVFFGEKQPTLVYLSLLPIITGVGIATVTEISFDMMGLISALISTMGFSMQNIFSK 178
The following BLAST results are available for this feature:
BLAST of DY262644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
S35E1_DROME2.563e-1528.65Solute carrier family 35 member E1 homolog OS=Dros... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CB11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262644 ID=DY262644; Name=DY262644; organism=Citrus clementina; type=EST; length=1190bp
AAAACCACATTTGTTTCTCTCTCAAAAGTAGCCACAGCGGTGACACGATG
GAGTCGCGAGTGCTGTCACGCGCCACCACCGCCACCACCATTTCAAGCCT
CCGAAGTTCGCCGGGTGAGAACCACCAAAACGTCAGCTTCGTCTCGTTGA
AGCCGATTGGAGCCGTTGGTGAAGGCGGGAATGTCATTTGGGGAAGACAG
CTACGTCCTGCTCTGCTCCTCGAGAGCTCCAGTGCTCCGGCTGGTCTTTT
CTCCGGAAAGAAGGAGATTCTCCGTCCAATCCTCGCCACCGCTTCTTCTC
CTGCCGAAGGAAGCGATTCCACCGGAGAAGCCGCTCCGGTCGGATTCTTT
GACAGGTATCCGGCCCTCGTGACCGGGTTCTTCTTCTTCATGTGGTACTT
TCTGAACGTGATATTCAACATTCTTAACAAGAGGATTTACAATTACTTCC
CATATCCTTAGTGAGTTCGCTTCGTTGGGTTCACACTTCCCATTTCGTTT
TGTTTGACGATGTGAATTTTATCAAAAATCCTTTTCCGTTTTACGTACGA
AAGTTTGTTTCTGTGCAGTTTTGTGTCCGTTATTCATTTGTTGGTTGGGG
TGGTTTACTGTTTGGTGAGCTGGGCTGTGGGCCTTCCCAAGCGAGCTCCT
ATTGATTCAAAATTCCTGAAGCTGTTAATCCCTGTTGCTGTGTGTCATGC
ATTGGGCCATGTTACCAGCAACTTGTCTTTTGCAGCAGTTGCTGTCTCCT
TTACTCATACCATCAAAGCTCTTGAGCCCTTCTTCAACGCTGGTGCTTCA
CAATTCATTCTAGGCCCACAGTTACCTCTGACTCTGTGGCTGTCTCTTGC
TCCTGTGGTTATTGGAGTGTCAATGGCATCATTGACTGAGCTGTCGTTCA
ATTGGACGGGCTTCATTAATGCTATGATTTCCAACTATCGTTTTACTACG
GAGTATCTACTCCAAAAAAGCCATGACTGAATGGACAGTACTAAAATTTA
TGCCAATTTTCCCATCTTGCGTTCTTTGCCTGATTTCCACCAGCATTCAT
TGTTAAGGGACTCCACCGAATAAGCTTGGCTTTAAATGAAGCAATTTCAC
AAGGGGGCAGGGGTCAAGTTTCATTTTAAAATTTTTTTTGGGGGGGGGAT
GTTTTACCCCCCCCCCACAAACCTTTGGGCTAACAAACAC
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