DY262659

Overview
NameDY262659
Unique NameDY262659
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1300
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262659 vs. ExPASy Swiss-Prot
Match: ERL2A_XENLA (Erlin-2-A OS=Xenopus laevis GN=erlin2-A PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.025e-84
Identity = 140/244 (57.38%), Postives = 186/244 (76.23%), Query Frame = 3
Query:  165 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKXEEIDNQMYLARQRGLADADFYRVLK 896
            H+I EGHVGVY+RGGALL T + PGFHL  P IT ++ VQ TLQTD++ ++PCGT GGVMI F++IEVVN L    VY+ ++++   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D    APGI I +VRVTKP IP+ I RNFE ME E+T++LIA +KQKV EKEAET +K AI EAEK A V++I  +QK+MEK++ +K  EI++  ++AR++  ADA++Y   K
Sbjct:   24 HKIEEGHVGVYYRGGALLSTTSGPGFHLMFPFITSFKSVQSTLQTDEIKNVPCGTSGGVMIYFDRIEVVNYLISSAVYDIVKNFTADYDKALIFNKIHHELNQFCSVHNLQEVYIELFDQIDENLKLALQEDLNLMAPGIIIQAVRVTKPKIPEAIGRNFELMEGEKTKLLIAAQKQKVVEKEAETERKKAIIEAEKVAQVAQIKYKQKVMEKETEKKISEIEDFAFVAREKARADAEYYTAHK 267          

HSP 2 Score: 50.0618 bits (118), Expect = 1.025e-84
Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 2
Query:  899 AEANKLMLTPEYLELKFIEAIADNTKIFLGEKVPSMILD 1015
            AEAN+L LTPEYL+L   +AIA N+KI+ G+ +P+M +D
Sbjct:  269 AEANRLKLTPEYLQLVKYQAIAANSKIYFGQDIPNMFMD 307          
BLAST of DY262659 vs. ExPASy Swiss-Prot
Match: ERLN1_DANRE (Erlin-1 OS=Danio rerio GN=erlin1 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 6.584e-84
Identity = 136/244 (55.74%), Postives = 183/244 (75.00%), Query Frame = 3
Query:  165 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKXEEIDNQMYLARQRGLADADFYRVLK 896
            H+I EGH+ VY+RGGALL +   PG+H+ LP IT Y  VQ TLQTD++ ++PCGT GGVMI F++IEVVN L    V + +R+Y   YDKT I++KIHHE+NQFCS H+LQ+VYI++FD IDE +K ALQ D    APG+ I +VRVTKP IP+ IRRN+E ME E+TR+LI ++ QKV EKEAET +K AI EA+K A V++I  +QK+MEK++ +K  EI++  +LAR++  ADA++Y   K
Sbjct:   24 HKIEEGHLAVYYRGGALLTSPNGPGYHIMLPFITSYRSVQTTLQTDEIKNVPCGTSGGVMIYFDRIEVVNMLIPTSVVDIVRNYTADYDKTLIFNKIHHELNQFCSVHTLQEVYIELFDIIDENLKTALQKDLNCMAPGLTIQAVRVTKPKIPEAIRRNYELMEAEKTRLLITVQTQKVVEKEAETERKKAIIEAQKVAQVAEIQFQQKVMEKETEKKISEIEDAAFLAREKARADAEYYTAAK 267          

HSP 2 Score: 50.447 bits (119), Expect = 6.584e-84
Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  899 AEANKLMLTPEYLELKFIEAIADNTKIFLGEKVPSMILDQRLLRNSLSE 1045
            AEAN L LTPEYL+L   +AIA N+KI+ G+ +P+M +D    R +  E
Sbjct:  269 AEANTLKLTPEYLQLMKYQAIAANSKIYFGQDIPNMFVDSSASRPAAGE 317          
BLAST of DY262659 vs. ExPASy Swiss-Prot
Match: ERLN2_DANRE (Erlin-2 OS=Danio rerio GN=erlin2 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 1.004e-76
Identity = 141/240 (58.75%), Postives = 181/240 (75.42%), Query Frame = 3
Query:  165 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKXEEIDNQMYLARQRGLADADFY 884
            H+I EGHVGVY+RGGALL   + PGFHL LP IT ++ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY  +R++   YDK  I++K+HHE+NQFCS H+LQ VYI +FDQIDE +K  LQ D T  APG+ I +VRVTKP IP+ IRRN+E ME ERT++LIA + QKV EKEAET +K A+ EAEK A V++I   QK+MEK++ +K  +I++  YLARQ+  ADA+FY
Sbjct:   23 HKIEEGHVGVYYRGGALLTATSGPGFHLMLPFITTFKSVQTTLQTDEVKNVPCGTGGGVMIYFDRIEVVNYLVPSAVYGIVRNFTADYDKALIFNKVHHELNQFCSVHTLQDVYIGLFDQIDENLKLTLQEDLTSMAPGLIIQAVRVTKPNIPESIRRNYELMESERTKLLIAAQTQKVVEKEAETERKKAVIEAEKVAQVAEIKFGQKVMEKETEKKISQIEDSAYLARQKAKADAEFY 262          
BLAST of DY262659 vs. ExPASy Swiss-Prot
Match: ERLN1_XENTR (Erlin-1 OS=Xenopus tropicalis GN=erlin1 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 1.311e-76
Identity = 137/244 (56.15%), Postives = 185/244 (75.82%), Query Frame = 3
Query:  165 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKXEEIDNQMYLARQRGLADADFYRVLK 896
            H++ EGH+ VY+RGGALL     PG+H+  P IT++  VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +R+Y   YDKT I++KIHHE+NQFCSSH+LQ+VYI++FDQIDE +K +LQ++    APG+ I +VRVTKP IP+ IRRNFE ME E+T++LIA ++QKV EKEAET +K A+ EAEK A V+KI   QK+MEK++ +   EI++  YLAR++  ADA++Y   K
Sbjct:   24 HKVEEGHLAVYYRGGALLGGPGDPGYHIMFPFITYFRSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNMLTPSAVYDVVRNYTADYDKTLIFNKIHHELNQFCSSHTLQEVYIELFDQIDENLKLSLQMELNVMAPGLTIQAVRVTKPKIPEAIRRNFELMESEKTKLLIAEQRQKVVEKEAETERKKAVIEAEKVAQVAKIQYRQKVMEKETEKFISEIEDSAYLAREKAKADAEYYTAQK 267          
The following BLAST results are available for this feature:
BLAST of DY262659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ERL2A_XENLA1.025e-8457.38Erlin-2-A OS=Xenopus laevis GN=erlin2-A PE=2 SV=1[more]
ERLN1_DANRE6.584e-8455.74Erlin-1 OS=Danio rerio GN=erlin1 PE=2 SV=1[more]
ERLN2_DANRE1.004e-7658.75Erlin-2 OS=Danio rerio GN=erlin2 PE=2 SV=1[more]
ERLN1_XENTR1.311e-7656.15Erlin-1 OS=Xenopus tropicalis GN=erlin1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262659 ID=DY262659; Name=DY262659; organism=Citrus clementina; type=EST; length=1300bp
ATCCACAGCAACAAGGAGTAGGCGCTACACAGGCACAGCCTCGGCCTCAG
CCTCAGCCTGGCGATTCGTCTGCTATACTCGCCGTGTTCCTCACTTTCAT
CGCTATTGTCTCACTGATATTGATCCCATCATCGTCATCCATCAAAAGTA
GCCTGGCCATTTTGCACCAAATTCCAGAAGGCCACGTTGGAGTATATTGG
AGAGGAGGTGCCCTTCTAGAGACAATTACACACCCAGGCTTCCATCTGAA
GTTGCCTTTGATAACACACTACGAGCCTGTTCAAGTGACCCTTCAGACAG
ATCAGGTTACTGACATTCCATGTGGGACCAAAGGGGGTGTAATGATCAAC
TTTGAGAAGATAGAGGTTGTTAACCGGCTTCGTAAGGAATATGTGTACGA
GACTCTGCGCGACTATGGCGTGCAATATGACAAGACATGGATATATGACA
AGATTCATCATGAGATCAATCAGTTCTGTAGTTCTCATAGTCTGCAACAA
GTCTATATTGATGTGTTTGATCAGATTGACGAAAAGATGAAGGATGCTCT
TCAGGTTGACTGCACGCGTTATGCTCCAGGCATTGAAATTATCAGTGTGC
GTGTTACAAAGCCTACTATTCCAGATAGAATCAGAAGAAATTTTGAACAA
ATGGAAGAGGAACGTACTAGGGTGTTAATTGCTATTGAGAAACAGAAAGT
AGCTGAGAAAGAGGCAGAGACAAGCAAAAAGATGGCTATCAGTGAAGCTG
AGAAGAATGCCAATGTTAGCAAGATCCTTATGGAACAGAAGTTGATGGAG
AAGGACAGTGCTCGGAAGCANGAGGAAATTGACAATCAAATGTACTTGGC
TCGTCAAAGGGGCCTGGCAGATGCTGATTTCTACCGCGTACTGAAAGAGC
AGAGGCCAACAAGCTGATGCTTACTCCTGAATATCTTGAACTGAAGTTTA
TTGAAGCCATAGCTGATAATACAAAAATTTTCTTGGGTGAAAAGGTGCCT
AGCATGATTTTGGATCAAAGACTGCTAAGGAACTCCCTTTCAGAAATCTC
CCGAAATACCTCTTTTGAAGGGATCTGCCAATGCTAAAATGGAAATTTGG
GTGAAGGTTGGGGTGGCCGTTAGGTGCCAAACGTATTGGTTACAAAAAAT
AAAAAAAAAAAAGAAAAAAAATTCATTGGTTTTTTCCCCACAACCATAAA
TCAAATTTTTGGGGGAAAACCGCTGTTGTTTTTTATTAGGGAAAAGGGAT
TCCCTTTTTTATTTAGGACACTACCCCTTTTTTTCCTTTTAAATATACTT
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