DY262683
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262683 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.841e-23 Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 3 Query: 441 VRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKET-SGQETVKLAIRAL 845 + KI +D+HI A +GL ADARVL++RAR+E Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E + E ++LA+ AL Sbjct: 66 IEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVNEGMELALYAL 199
BLAST of DY262683 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.841e-23 Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 3 Query: 441 VRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE-TSGQETVKLAIRAL 845 + KI +D+HI A +GL ADARVL++RAR+E Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E + E ++LA+ AL Sbjct: 66 IEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDMTVNEGMELALYAL 199
BLAST of DY262683 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 3.841e-23 Identity = 59/145 (40.69%), Postives = 86/145 (59.31%), Query Frame = 3 Query: 420 IAFAYRMVRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE-TSGQETVKLAIRALLE 851 I + + K+ + HI + +G+ D RVLV RAR Q + L ++P+ + + +A + Q+YTQSGGVRPFG+S LI G+D G P L+Q+DPSG + AWKA A G+N + + FLEK Y E ++ + AI L E Sbjct: 55 ILYDEQSAHKVEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWD--EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKE 197
BLAST of DY262683 vs. ExPASy Swiss-Prot
Match: PSMA_NATPD (Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=psmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.017e-23 Identity = 60/140 (42.86%), Postives = 89/140 (63.57%), Query Frame = 3 Query: 441 VRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKETSGQET-VKLAIRALLEVS 857 V KI D+HI +A AG ADAR L++ AR + Q ++L ++P+ VE +T+ + Q+YTQ GG RPFG++ +I G + G P LY+TDPSGT W+A A G + I+E+LE++Y E+ E + LA+ AL V+ Sbjct: 66 VEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQYTQVGGARPFGVALIIGGIE--DGEPRLYETDPSGTPYEWQALAVGADRGDIQEYLEEHYSESLDTEAGIGLALEALASVN 203
BLAST of DY262683 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 6.553e-23 Identity = 59/136 (43.38%), Postives = 84/136 (61.76%), Query Frame = 3 Query: 441 VRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKETS-GQETVKLAIRAL 845 + KI +D+HI A +GL ADARVL++RAR+E Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E E ++LA+ AL Sbjct: 66 IEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGMELALYAL 199
BLAST of DY262683 vs. ExPASy Swiss-Prot
Match: PSMA_HALSA (Proteasome subunit alpha OS=Halobacterium salinarium GN=psmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 6.553e-23 Identity = 61/138 (44.20%), Postives = 85/138 (61.59%), Query Frame = 3 Query: 441 VRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE-TSGQETVKLAIRALLE 851 V K+ +D+H+ A AG ADAR LV+ AR + Q R+ ++P+ V +T+ + Q+YTQ GG RPFG++ LI G + G P L++TDPSGT + WKA A G N I+EFLE Y S + + LA+RAL E Sbjct: 66 VEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVE--GGEPRLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNE 201
BLAST of DY262683 vs. ExPASy Swiss-Prot
Match: PSMA_HALS3 (Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=psmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 6.553e-23 Identity = 61/138 (44.20%), Postives = 85/138 (61.59%), Query Frame = 3 Query: 441 VRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE-TSGQETVKLAIRALLE 851 V K+ +D+H+ A AG ADAR LV+ AR + Q R+ ++P+ V +T+ + Q+YTQ GG RPFG++ LI G + G P L++TDPSGT + WKA A G N I+EFLE Y S + + LA+RAL E Sbjct: 66 VEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVE--GGEPRLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNE 201
BLAST of DY262683 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 8.558e-23 Identity = 63/156 (40.38%), Postives = 92/156 (58.97%), Query Frame = 3 Query: 441 VRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKETSGQE-TVKLAIRALLEVSC*FSNVPVSNLGFVSL 905 + KI +D+HI A +GL ADAR LV+RAR+E Q +R++ ++ + VE I++ I +Q YTQ GGVRP+G + LI G D P L++TDPSG +KA A G N++ E E +YKE E + L + AL + + + +G VSL Sbjct: 63 IEKIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDKR--PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKEDMNIEAAILLGMDALYKAAEGKFDAGTLEVGVVSL 216
BLAST of DY262683 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 8.558e-23 Identity = 61/136 (44.85%), Postives = 87/136 (63.97%), Query Frame = 3 Query: 441 VRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNY-KETSGQETVKLAIRAL 845 V KI D+H+ +A AG ADAR L++ AR + Q +RL +PV +E +T+ + Q+YTQ GG RPFG++ LI G + G P LY+TDPSGT WKA + G + + ++E LE+NY +E S E V LA+R + Sbjct: 66 VEKIHKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVGGARPFGVALLIGGIE--DGSPRLYETDPSGTPYEWKAVSIGADRSDLQEHLEENYTEELSLDEGVGLALRTI 199
BLAST of DY262683 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.460e-22 Identity = 63/140 (45.00%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 441 VRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKETSG-QETVKLAIRALLEVS 857 V KI D+HI +A AG ADAR L++ AR + Q ++L +PV VE +T+ I Q+YTQ GG RPFG++ +I G G P L++TDPSGT WKA A G + IR++LE++Y E E V LA+ AL V+ Sbjct: 66 VEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQYTQVGGARPFGVALIIGGI--VNGEPRLFETDPSGTPYEWKALAVGADRGDIRDYLEEHYDEGMDLDEGVDLALAALASVN 203 The following BLAST results are available for this feature:
BLAST of DY262683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262683 ID=DY262683; Name=DY262683; organism=Citrus clementina; type=EST; length=1323bpback to top |