DY262715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262715 vs. ExPASy Swiss-Prot
Match: HEM3_ERWT9 (Porphobilinogen deaminase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=hemC PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 4.498e-39 Identity = 96/225 (42.67%), Postives = 133/225 (59.11%), Query Frame = 2 Query: 323 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPARCSGGYWELLCEAMTKKWANYLESLNHGE 997 I+RI TR SPLAL QA + +L+A HP L ++++ + T GD IL PLA +GGKGLF KE+++A+++ DIAVHSMKDVP P L +RED DAF+ P G+IVGT+SLRR+ Q+ R P L V+ + RGNV TRL KL+ A +LA+AGLKRL + + + ++ ++ LPA G + C + L +LNH E Sbjct: 5 ILRIATRRSPLALWQAEYVQRRLIACHPGLR----VELLPMVTRGDVILDTPLAKVGGKGLFVKELEQAMLSGSADIAVHSMKDVPVAFPPGLGLVAICEREDPHDAFVSHHYTSVDSLPQGAIVGTSSLRRQCQLSARRPDL-VIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLGLGDRIRQVMPAEESLPAVGQGAV-GIECRLDDIQTIALLAALNHSE 223
BLAST of DY262715 vs. ExPASy Swiss-Prot
Match: HEM3_VIBVY (Porphobilinogen deaminase OS=Vibrio vulnificus (strain YJ016) GN=hemC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 5.875e-39 Identity = 96/224 (42.86%), Postives = 129/224 (57.59%), Query Frame = 2 Query: 326 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPARCSGGYWELLCEAMTKKWANYLESLNHGE 997 IRI TR SPLAL QA+ ++ L HP L +++V + T GD IL PLA +GGKGLF KE++ A++ + D+AVHSMKDVP PE L +RED RDAF+ P G++VGT SLRR+ Q+ P L V++ RGNV TRL KL+ A +LA AGLKRL + E + + + + LPA G + C ++ LE LNH + Sbjct: 7 IRIATRKSPLALWQAYYVKDALQKAHPGLE----VELVTMVTKGDVILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQGAVVGTCSLRRQCQLKAYRPDL-VIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEERIRSFIEPEQSLPAVGQGAV-GIECRTNDERILKLLEPLNHAD 224
BLAST of DY262715 vs. ExPASy Swiss-Prot
Match: HEM3_VIBVU (Porphobilinogen deaminase OS=Vibrio vulnificus GN=hemC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 5.875e-39 Identity = 96/224 (42.86%), Postives = 129/224 (57.59%), Query Frame = 2 Query: 326 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPARCSGGYWELLCEAMTKKWANYLESLNHGE 997 IRI TR SPLAL QA+ ++ L HP L +++V + T GD IL PLA +GGKGLF KE++ A++ + D+AVHSMKDVP PE L +RED RDAF+ P G++VGT SLRR+ Q+ P L V++ RGNV TRL KL+ A +LA AGLKRL + E + + + + LPA G + C ++ LE LNH + Sbjct: 7 IRIATRKSPLALWQAYYVKDALQKAHPGLE----VELVTMVTKGDVILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQGAVVGTCSLRRQCQLKAYRPDL-VIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEERIRSFIEPEQSLPAVGQGAV-GIECRTNDERILKLLEPLNHAD 224
BLAST of DY262715 vs. ExPASy Swiss-Prot
Match: HEM3_PSEAB (Porphobilinogen deaminase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=hemC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 5.875e-39 Identity = 100/224 (44.64%), Postives = 128/224 (57.14%), Query Frame = 2 Query: 326 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPARCSGGYWELLCEAMTKKWANYLESLNHGE 997 IRI TR S LAL QA + +L HP L + ++ + + GDK+L PLA IGGKGLF KE++ AL+ DIAVHSMKDVP PE L +RED RDAF+ PAGS+VGT+SLRR++Q+L R P L++ RGNV TRL KL+ A +LA AGL RL + + +SVDD LPA G + C LE L+H + Sbjct: 6 IRIATRQSALALWQAEYVKARLEQAHPGLT----VTLLPMTSRGDKLLDAPLAKIGGKGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQLPAGSVVGTSSLRRQAQLLARRPDLQI-RFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFESRIRSSISVDDSLPAGGQGAV-GIECRTADSDLHALLEPLHHSD 223
BLAST of DY262715 vs. ExPASy Swiss-Prot
Match: HEM3_GEOBB (Porphobilinogen deaminase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=hemC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 5.875e-39 Identity = 94/195 (48.21%), Postives = 124/195 (63.59%), Query Frame = 2 Query: 326 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPA 910 +RIGTR S LAL QA+ +++L +P++ + + IKT GDKIL PLA +GGKGLF KEI+EA++ +IDIAVHSMKDVPT PE L C +RED RDA I P G+ +GT++LRR++Q+L P L+ M RGNVQTR+ KL + A +LA AGL RL + +T +L D LPA Sbjct: 6 LRIGTRASQLALWQANWVKSELEKRYPDMT----VTLTKIKTIGDKILDVPLAQVGGKGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVI-SNGVKFADLPQGARIGTSALRRQAQLLKVRPDLE-MVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLGFADQITEMLPTDLSLPA 194
BLAST of DY262715 vs. ExPASy Swiss-Prot
Match: HEM3_CHRVO (Porphobilinogen deaminase OS=Chromobacterium violaceum GN=hemC PE=3 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 5.875e-39 Identity = 91/199 (45.73%), Postives = 129/199 (64.82%), Query Frame = 2 Query: 326 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPARCSG 922 I I +R S LA+ QA + +L AL+P L ++I+ + T GD+IL + L+ IGGKGLF KE+++AL++ + D+AVHS+KDVP LP+ L +RED RDAF+ PAGS+VGT+SLRR++Q+ R+P L V + RGNVQTRL+KL++ A +LA AGLKRL + E + L+ + LPA G Sbjct: 4 IVIASRESRLAMWQAEHIQARLQALYPHLT----VEILGMTTQGDQILDKTLSKIGGKGLFVKELEQALMDGRADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAGSVVGTSSLRREAQLRARFPQLAV-KPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQGELAPSESLPAAGQG 197
BLAST of DY262715 vs. ExPASy Swiss-Prot
Match: HEM3_SHEFN (Porphobilinogen deaminase OS=Shewanella frigidimarina (strain NCIMB 400) GN=hemC PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 7.673e-39 Identity = 92/200 (46.00%), Postives = 124/200 (62.00%), Query Frame = 2 Query: 323 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPARCSG 922 IIRI TR SPLA+ QA + +L +HP L ++++ + T GD IL PLA IGGKGLF KE++ A++ ++ DIAVHSMKD+P PE L +RED RDAF+ P G++VGT+SLRR+ QI P L V+++ RGNV TRL KL+ A +LA AGL RL + E + N +S ++ LPA G Sbjct: 5 IIRIATRKSPLAMWQAEFVKAELERIHPGLT----VELLPMSTKGDVILDTPLAKIGGKGLFVKELEVAMLENRADIAVHSMKDLPVEFPEGLGLQVICEREDPRDAFVSNNYKSISELPQGAVVGTSSLRRQCQIRAARPDL-VIKDLRGNVGTRLAKLDSGDYDAIILAAAGLIRLKLNERIANFISAEESLPANGQG 199
BLAST of DY262715 vs. ExPASy Swiss-Prot
Match: HEM3_MANSM (Porphobilinogen deaminase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=hemC PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 7.673e-39 Identity = 93/199 (46.73%), Postives = 123/199 (61.81%), Query Frame = 2 Query: 326 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPARCSG 922 ++I TR SPLAL QA+ +++L AL+P+L +++V + T GD IL PLA IGGKGLF KE++ AL+N + DIAVHSMKDVP P+ L +RED RDAF+ P G+IVGT+SLRR+ Q+ P L + + RGNV TRL KL+ A +LA AGL RL M E + + + D LPA G Sbjct: 7 LKIATRQSPLALWQANYVKDRLTALYPDLQ----VELVTMVTKGDVILDTPLAKIGGKGLFVKELEHALLNHEADIAVHSMKDVPMEFPQGLGLSVICKREDPRDAFVSNKYRSLAELPQGAIVGTSSLRRQCQLKSLRPDLDI-RSLRGNVGTRLSKLDNGDYDAIILASAGLIRLGMAERIASFIETDISLPAAGQG 200
BLAST of DY262715 vs. ExPASy Swiss-Prot
Match: HEM3_GEOUR (Porphobilinogen deaminase OS=Geobacter uraniireducens (strain Rf4) GN=hemC PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 7.673e-39 Identity = 98/222 (44.14%), Postives = 133/222 (59.91%), Query Frame = 2 Query: 326 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPARCSGGYWELLCEAMTKKWANYLESLNH 991 +RIGTR S LAL QA+ +++L +P L + ++ IKT GDKIL PLA +GGKGLF KEI+EA++ IDIAVHSMKDVPT PE L C +RED RDA I P G+ +GT++LRR++Q+L P ++ M RGNV+TR+ KL + A +LA AGLKRL T+ V L D +PA G + C ++ + ++ NH Sbjct: 6 LRIGTRASQLALWQANWVKSELEKRYPGLE----VSLLKIKTIGDKILDVPLAQVGGKGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVI-SRGIKFADLPKGAKIGTSALRRQAQLLKIRPDME-MVIIRGNVETRINKLEAENLDAVILAAAGLKRLGFTDKVAEYLPTDLSIPA-IGQGALGIECRLDNEEVKSAIDFFNH 220
BLAST of DY262715 vs. ExPASy Swiss-Prot
Match: HEM3_SHESH (Porphobilinogen deaminase OS=Shewanella sediminis (strain HAW-EB3) GN=hemC PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.002e-38 Identity = 97/231 (41.99%), Postives = 134/231 (58.01%), Query Frame = 2 Query: 323 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPARCSGGYWELLCEAMTKKWANYLESLNHGEKKNLLL 1015 +IRI TR SPLAL QA + +L H L ++++ + T GD IL PLA +GGKGLF KE++ A++ + DIAVHSMKDVP PE L +RED RDAF+ P G++VGT+SLRR+ QI P L V+ + RGNV TRL KL+ A +LA AGLKRL + E +T+ +S ++ LPA G + C ++ L L H E ++ ++ Sbjct: 5 VIRIATRKSPLALWQAEFVKAELEKFHEGLT----VELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNNYKNISELPQGAVVGTSSLRRQCQIRASRPDL-VIRDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLKLEERITSFISAEESLPANGQGAV-GIECRINDERVKALLAPLEHTETRHRVI 229 The following BLAST results are available for this feature:
BLAST of DY262715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 475
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262715 ID=DY262715; Name=DY262715; organism=Citrus clementina; type=EST; length=1220bpback to top |