DY262727

Overview
NameDY262727
Unique NameDY262727
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1182
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262727 vs. ExPASy Swiss-Prot
Match: ATCY_SCHPO (Probable cation-transporting ATPase C29A4.19c OS=Schizosaccharomyces pombe GN=SPAC29A4.19c PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.104e-18
Identity = 73/311 (23.47%), Postives = 139/311 (44.69%), Query Frame = 1
Query:   82 IAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD--KSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPDLPMELSIAVNTSLIALARRGIFLTKPFRFH 1008
            IA   + +G N     + +   ++    + PF++FQ   V +W  D + +YS   +F+         K   ++   I  +    Q + V R      +   DLV GD++          + K+ P D ++   S +++E+++TGES P  K  +        + A  +    H++  GTK L+          TP   CL  V+RTGF +++G+L+R +L+   R +    +S  F+  + + + ++  ++    +     S   + L    ++T ++PP LP  LS+ +  S+  L+R  I+ T P   H
Sbjct:  172 IAKLRQVYGSNSLVSTKKSIVTILLNEVLHPFYLFQAVSVLIWLCDSFVFYSCCIVFISSYSIFLSVKESKESENRIHSIIGAPQPVTVIRNQVKQTVLADDLVIGDLLYFSNL-----DLKTCPVDGILFSSSCLLDESMVTGESVPARKFPLEDNSLDSWMIASCNIFSPHLIHAGTKFLKID-------STPSTPCLISVVRTGFRSNKGQLIRNLLYPNLRPSQLYLDSMSFLKTMAILSFVSIVFIAIY-LNLYNASFGHVVLRSLDVLTILVPPALPATLSVGIANSIARLSRALIYTTSPESIH 469          
BLAST of DY262727 vs. ExPASy Swiss-Prot
Match: ATX1_PLAFA (Probable cation-transporting ATPase 1 OS=Plasmodium falciparum PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.824e-13
Identity = 48/160 (30.00%), Postives = 79/160 (49.38%), Query Frame = 1
Query:   46 YLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTP 525
            +L CTG   E  I      +G         +F  L+ +  M PFF+FQ+F + +W LD Y  Y++  LF+  +      K+ +K   +I+ +      I V+R      ++ ++LVPGD+  I         + ++P D +IL GS  ++E +LTGES P
Sbjct:    2 HLMCTGLRNEKLINDRKILYGECNLNIKSDSFIILLFKEIMNPFFIFQIFAMIVWSLDNYIEYTISILFITSISIILELKNTIKNQKKIKNMLNYTCPINVYRYNTSYIISSSELVPGDIYEI-------KNNMTIPCDTIILSGSVTMSEHMLTGESVP 154          
BLAST of DY262727 vs. ExPASy Swiss-Prot
Match: ATX9_TETTH (Probable cation-transporting ATPase 9 OS=Tetrahymena thermophila GN=TPA9 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.531e-12
Identity = 64/294 (21.77%), Postives = 127/294 (43.20%), Query Frame = 1
Query:  103 WGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCG----KWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPDLPMELSIAVNTSLIALAR 972
            +G++  E   P+F  LM     +P      F + +W +++ +  +  T+       S +       + +++   ++N +++V R      + + +A   + PGD+V   R       + ++P D +IL GS  V EA +TGE+    K  I      +       KSH LF GT++          +K  D     +V+RTGF + +G+++R +L+          ++    + +    +I     L + ++      +  F    ++I S  PP +PM ++I   T+ + L R
Sbjct:  153 YGKSEIEINVPSFLTLMWREFKKPINFLLYFGIIVWGIEQMYVSTAITVVFTTTINSLICIYIRGVMQKLKDACLNNTSVIVQRHNGQGYQEITVASNMIAPGDIVLFKR-------EVTLPFDCVILEGSCQVTEANITGENVAIGKCQIPTDHHNDIFKYESSKSHTLFQGTQL----------MKIEDDILKVIVVRTGFGSYKGQIIRALLYPKPFNKKFQQQAVKLTILMATLLLIGFLSTLSRLLDIELPPLFIAFRFLDILIYSA-PPGMPMLIAI---TNFVGLKR 425          

HSP 2 Score: 20.4014 bits (41), Expect = 4.531e-12
Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 3
Query:  999 SFSFAGKVDWCCFDK 1043
            S S AG++   CFDK
Sbjct:  438 SASQAGRIQTLCFDK 452          
The following BLAST results are available for this feature:
BLAST of DY262727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
ATCY_SCHPO1.104e-1823.47Probable cation-transporting ATPase C29A4.19c OS=S... [more]
ATX1_PLAFA1.824e-1330.00Probable cation-transporting ATPase 1 OS=Plasmodiu... [more]
ATX9_TETTH4.531e-1221.77Probable cation-transporting ATPase 9 OS=Tetrahyme... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DB03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262727 ID=DY262727; Name=DY262727; organism=Citrus clementina; type=EST; length=1182bp
ACCTTTTGCAAACTTCCTTATCCTACTAAAGAAACATTTGGGTATTATCT
CAAATGTACGGGCCATTCCACTGAAGCTAAAATTGCTGTGGCGACTGAAA
AATGGGGACGAAATGTATTTGAATATCCACAGCCTACATTCCAGAAATTA
ATGAAGGAGAACTGCATGGAGCCATTTTTTGTATTTCAGGTCTTCTGTGT
TGGTCTCTGGTGTTTGGATGAATATTGGTATTACAGCTTGTTCACTCTCT
TCATGCTGTTCATGTTTGAGTCAACAATGGCAAAAAGTCGGTTGAAAACT
CTAACTGAGATAAGACGTGTTAGAGTTGATAATCAGACCATAATGGTGCA
TCGTTGTGGGAAGTGGGTGAAGCTTGCAGGCACCGATCTGGTGCCTGGGG
ATGTTGTCTCCATTGGGCGCTCTTCTGGTCAGACAGGTGAAGACAAGTCT
GTGCCAGCTGATATGCTTATATTAGGTGGAAGTGCTATTGTGAATGAAGC
CATTCTCACAGGCGAGTCTACTCCCCAATGGAAGGTTTCTATCATGGGTA
GGGAAACTGGGGAAAAATTATCTGCTAGGAGAGATAAAAGCCACGTTTTA
TTTGGTGGGACAAAGATATTGCAGCACACTCCTGACAAGACCTTTCCTCT
GAAAACACCTGATGGTGGCTGCTTGGCTGTTGTGTTGCGCACTGGATTTG
AAACAAGTCAGGGGAAACTGATGAGGACAATATTGTTTTCAACTGAGAGG
GTTACCGCAAATAGCTGGGAAAGCGGATTATTCATTTTATTTTTAGTTGT
ATTTGCAGTAATAGCTGCTGGTTACGTACTTAAGAAGGGGATGGAGGATC
CCACAAGGAGCAAGTATAAGCTGTTTCTAAGCTGTTCTCTTATTATTACA
TCTGTGATCCCCCCTGACCTGCCAATGGAACTATCGATAGCTGTTAATAC
ATCCCTGATTGCGCTGGCCCGTCGTGGGATATTTTTGACAAAACCCTTTC
GTTTTCATTTGCTGGAAAGGTTGACTGGTGTTGTTTTGACAAACTGGTAC
CTTTCATTCAAAAGACTTGAAATTTCGGGGGTTGTTTGGGTGTCCAAGGC
AAAATTAAAAAAACAAATATATTAAAAATCCTTTTCCCCCCCCCAAAAAA
ACCCGGGCATTTTTTTCTTGCCCCCCCCCTCC
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